RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 MISP3Q96FF7 219 aa11.97□□□□□ -0.49
LIG1-202ENST00000427526 FAM210BQ96KR6 192 aa11.97□□□□□ -0.49
LIG1-202ENST00000427526 CLCF1Q9UBD9 225 aa11.97□□□□□ -0.49
LIG1-202ENST00000427526 PHOX2AO14813 284 aa11.97□□□□□ -0.49
LIG1-202ENST00000427526 OR3A1P47881 315 aa11.97□□□□□ -0.49
LIG1-202ENST00000427526 ELLP55199 621 aaPredicted RBP11.97□□□□□ -0.49
LIG1-202ENST00000427526 COTL1Q14019 142 aa11.97□□□□□ -0.49
LIG1-202ENST00000427526 PYY3Q5JQD4 70 aa11.97□□□□□ -0.49
LIG1-202ENST00000427526 UNQ6494/PRO21346Q6UXR6 183 aa11.97□□□□□ -0.49
LIG1-202ENST00000427526 C11orf53Q8IXP5 236 aa11.97□□□□□ -0.49
LIG1-202ENST00000427526 KCNIP1Q9NZI2 227 aa11.97□□□□□ -0.49
LIG1-202ENST00000427526 BOD1L1Q8NFC6 3051 aa11.96□□□□□ -0.49
LIG1-202ENST00000427526 TMEM30CPA0ZSE6 113 aa11.96□□□□□ -0.49
LIG1-202ENST00000427526 PMS2P5A8MQ11 134 aa11.96□□□□□ -0.49
LIG1-202ENST00000427526 CEBPZOSA8MTT3 80 aa11.96□□□□□ -0.49
LIG1-202ENST00000427526 ZNF737O75373 536 aa11.96□□□□□ -0.49
LIG1-202ENST00000427526 CD55P08174 381 aa11.96□□□□□ -0.49
LIG1-202ENST00000427526 G6PCP35575 357 aa11.96□□□□□ -0.49
LIG1-202ENST00000427526 CD81P60033 236 aa11.96□□□□□ -0.49
LIG1-202ENST00000427526 OR8G2PQ6IF36 304 aa11.96□□□□□ -0.49
LIG1-202ENST00000427526 ZNF383Q8NA42 475 aa11.96□□□□□ -0.49
LIG1-202ENST00000427526 TAAR6Q96RI8 345 aa11.96□□□□□ -0.49
LIG1-202ENST00000427526 OR2D2Q9H210 308 aa11.96□□□□□ -0.49
LIG1-202ENST00000427526 GAR1Q9NY12 217 aaKnown RBP11.96□□□□□ -0.49
LIG1-202ENST00000427526 CHD3Q12873 2000 aaKnown RBP11.96□□□□□ -0.49
LIG1-202ENST00000427526 LRRC30A6NM36 301 aa11.96□□□□□ -0.5
LIG1-202ENST00000427526 CLDN1O95832 211 aa11.96□□□□□ -0.5
LIG1-202ENST00000427526 KRASP01116 189 aa11.96□□□□□ -0.5
LIG1-202ENST00000427526 MPV17P39210 176 aa11.96□□□□□ -0.5
LIG1-202ENST00000427526 PLA2G5P39877 138 aa11.96□□□□□ -0.5
LIG1-202ENST00000427526 RTP5Q14D33 572 aa11.96□□□□□ -0.5
LIG1-202ENST00000427526 SLC35E4Q6ICL7 350 aa11.96□□□□□ -0.5
LIG1-202ENST00000427526 CDPF1Q6NVV7 123 aa11.96□□□□□ -0.5
LIG1-202ENST00000427526 OR52L2PQ8NGH6 319 aa11.96□□□□□ -0.5
LIG1-202ENST00000427526 KLF14Q8TD94 323 aaPredicted RBP11.96□□□□□ -0.5
LIG1-202ENST00000427526 KIAA2026Q5HYC2 2103 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 TRBV24-1A0A075B6N3 115 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 MLNRO43193 412 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 UBE2NP61088 152 aaKnown RBP11.95□□□□□ -0.5
LIG1-202ENST00000427526 TGFBR3Q03167 851 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 C1orf87Q8N0U7 546 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 LHX4Q969G2 390 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 AGMATQ9BSE5 352 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 SLC39A9Q9NUM3 307 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 ODAMA1E959 279 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 OOEPA6NGQ2 149 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 MARCH11A6NNE9 402 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 SEC14L6B5MCN3 397 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 WNT9BO14905 357 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 LYZL6O75951 148 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 IFNA1P01562 189 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 ACSM6Q6P461 480 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 Q6ZR03 302 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 CNEP1R1Q8N9A8 125 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 FRZBQ92765 325 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 MRPL37Q9BZE1 423 aaKnown RBP11.95□□□□□ -0.5
LIG1-202ENST00000427526 CEACAM4O75871 244 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 HBZP02008 142 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 SOD3P08294 240 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 TRGC1P0CF51 173 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 HOXA4Q00056 320 aaPredicted RBP11.95□□□□□ -0.5
LIG1-202ENST00000427526 AESQ08117 197 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 MSMO1Q15800 293 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 ATP6V1FQ16864 119 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 COQ2Q96H96 371 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 CTDSP1Q9GZU7 261 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.95□□□□□ -0.5
LIG1-202ENST00000427526 WASF3Q9UPY6 502 aa11.95□□□□□ -0.5
LIG1-202ENST00000427526 SPTBN2O15020 2390 aa11.94□□□□□ -0.5
LIG1-202ENST00000427526 MGAQ8IWI9 3026 aa11.94□□□□□ -0.5
LIG1-202ENST00000427526 S1PR2O95136 353 aa11.94□□□□□ -0.5
LIG1-202ENST00000427526 MEF2BQ02080 365 aaPredicted RBP11.94□□□□□ -0.5
LIG1-202ENST00000427526 ZNF816Q0VGE8 651 aaPredicted RBP11.94□□□□□ -0.5
LIG1-202ENST00000427526 GFI1BQ5VTD9 330 aa11.94□□□□□ -0.5
LIG1-202ENST00000427526 INO80CQ6PI98 192 aaPredicted RBP11.94□□□□□ -0.5
LIG1-202ENST00000427526 ZNF826PQ6ZT77 177 aa11.94□□□□□ -0.5
LIG1-202ENST00000427526 HIST3H2BBQ8N257 126 aa11.94□□□□□ -0.5
LIG1-202ENST00000427526 C9orf106Q8NAJ2 232 aa11.94□□□□□ -0.5
LIG1-202ENST00000427526 CLN8Q9UBY8 286 aa11.94□□□□□ -0.5
LIG1-202ENST00000427526 C17orf98A8MV24 154 aa11.94□□□□□ -0.5
LIG1-202ENST00000427526 AQP7O14520 342 aa11.94□□□□□ -0.5
LIG1-202ENST00000427526 OPN1MWP04001 364 aa11.94□□□□□ -0.5
LIG1-202ENST00000427526 OPN1MW2P0DN77 364 aa11.94□□□□□ -0.5
LIG1-202ENST00000427526 OPN1MW3P0DN78 364 aa11.94□□□□□ -0.5
LIG1-202ENST00000427526 S100A2P29034 98 aa11.94□□□□□ -0.5
LIG1-202ENST00000427526 IL2RGP31785 369 aa11.94□□□□□ -0.5
LIG1-202ENST00000427526 GTF3C1Q12789 2109 aa11.94□□□□□ -0.5
LIG1-202ENST00000427526 FAM214BQ7L5A3 538 aa11.94□□□□□ -0.5
LIG1-202ENST00000427526 ASCL5Q7RTU5 278 aa11.94□□□□□ -0.5
LIG1-202ENST00000427526 ZNF808Q8N4W9 903 aaPredicted RBP11.94□□□□□ -0.5
LIG1-202ENST00000427526 TGOLN2O43493 480 aa11.93□□□□□ -0.5
LIG1-202ENST00000427526 CXorf67Q86X51 503 aaPredicted RBP11.93□□□□□ -0.5
LIG1-202ENST00000427526 PRR7Q8TB68 274 aa11.93□□□□□ -0.5
LIG1-202ENST00000427526 DTD1Q8TEA8 209 aa11.93□□□□□ -0.5
LIG1-202ENST00000427526 PRDM13Q9H4Q3 707 aa11.93□□□□□ -0.5
LIG1-202ENST00000427526 OBP2BQ9NPH6 170 aa11.93□□□□□ -0.5
LIG1-202ENST00000427526 NAT8Q9UHE5 227 aa11.93□□□□□ -0.5
LIG1-202ENST00000427526 ELOA3CA0A087WX78 387 aaPredicted RBP11.93□□□□□ -0.5
LIG1-202ENST00000427526 KLK10O43240 276 aa11.93□□□□□ -0.5
LIG1-202ENST00000427526 GNG10P50151 68 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms