RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 OR11H1Q8NG94 326 aa14.37□□□□□ -0.11
GPC1-205ENST00000427506 FLYWCH2Q96CP2 140 aaKnown RBP14.37□□□□□ -0.11
GPC1-205ENST00000427506 OR5B12Q96R08 314 aa14.37□□□□□ -0.11
GPC1-205ENST00000427506 ELF5Q9UKW6 265 aaPredicted RBP14.37□□□□□ -0.11
GPC1-205ENST00000427506 FBXO7Q9Y3I1 522 aa14.37□□□□□ -0.11
GPC1-205ENST00000427506 PRKDCP78527 4128 aaKnown RBP14.37□□□□□ -0.11
GPC1-205ENST00000427506 LOC100506127A0A0U1RQW1 187 aa14.36□□□□□ -0.11
GPC1-205ENST00000427506 WI2-2373I1.2A0A1W2PRP0 233 aa14.36□□□□□ -0.11
GPC1-205ENST00000427506 DIRAS3O95661 229 aa14.36□□□□□ -0.11
GPC1-205ENST00000427506 SDC2P34741 201 aa14.36□□□□□ -0.11
GPC1-205ENST00000427506 MXD1Q05195 221 aa14.36□□□□□ -0.11
GPC1-205ENST00000427506 CBX3Q13185 183 aa14.36□□□□□ -0.11
GPC1-205ENST00000427506 SRSF7Q16629 238 aaKnown RBP eCLIP14.36□□□□□ -0.11
GPC1-205ENST00000427506 SFXN4Q6P4A7 337 aa14.36□□□□□ -0.11
GPC1-205ENST00000427506 PPP1R27Q86WC6 154 aa14.36□□□□□ -0.11
GPC1-205ENST00000427506 MINDY2Q8NBR6 621 aa14.36□□□□□ -0.11
GPC1-205ENST00000427506 ST6GALNAC5Q9BVH7 336 aa14.36□□□□□ -0.11
GPC1-205ENST00000427506 GNB4Q9HAV0 340 aa14.36□□□□□ -0.11
GPC1-205ENST00000427506 SDHAF2Q9NX18 166 aa14.36□□□□□ -0.11
GPC1-205ENST00000427506 ZMAT5Q9UDW3 170 aaKnown RBP14.36□□□□□ -0.11
GPC1-205ENST00000427506 FOXA2Q9Y261 457 aaPredicted RBP14.36□□□□□ -0.11
GPC1-205ENST00000427506 SCGNO76038 276 aa14.35□□□□□ -0.11
GPC1-205ENST00000427506 SPDEFO95238 335 aa14.35□□□□□ -0.11
GPC1-205ENST00000427506 CA2P00918 260 aa14.35□□□□□ -0.11
GPC1-205ENST00000427506 DTYMKP23919 212 aa14.35□□□□□ -0.11
GPC1-205ENST00000427506 UNQ5815/PRO19632Q6UWF5 114 aa14.35□□□□□ -0.11
GPC1-205ENST00000427506 ZNF562Q6V9R5 426 aa14.35□□□□□ -0.11
GPC1-205ENST00000427506 TCTEX1D1Q8N7M0 179 aa14.35□□□□□ -0.11
GPC1-205ENST00000427506 OR1N2Q8NGR9 330 aa14.35□□□□□ -0.11
GPC1-205ENST00000427506 LGALS14Q8TCE9 139 aa14.35□□□□□ -0.11
GPC1-205ENST00000427506 MYOZ3Q8TDC0 251 aa14.35□□□□□ -0.11
GPC1-205ENST00000427506 FAM103A1Q9BTL3 118 aaKnown RBP14.35□□□□□ -0.11
GPC1-205ENST00000427506 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.35□□□□□ -0.11
GPC1-205ENST00000427506 GAB2Q9UQC2 676 aa14.35□□□□□ -0.11
GPC1-205ENST00000427506 IGKV1D-8A0A087WSZ0 117 aa14.34□□□□□ -0.11
GPC1-205ENST00000427506 SLC25A17O43808 307 aa14.34□□□□□ -0.11
GPC1-205ENST00000427506 CD36P16671 472 aa14.34□□□□□ -0.11
GPC1-205ENST00000427506 CD40LGP29965 261 aa14.34□□□□□ -0.11
GPC1-205ENST00000427506 CRIP2P52943 208 aaPredicted RBP14.34□□□□□ -0.11
GPC1-205ENST00000427506 DGCR2P98153 550 aa14.34□□□□□ -0.11
GPC1-205ENST00000427506 KIAA0141Q14154 515 aaPredicted RBP14.34□□□□□ -0.11
GPC1-205ENST00000427506 KCTD21Q4G0X4 260 aa14.34□□□□□ -0.11
GPC1-205ENST00000427506 ACTBL2Q562R1 376 aa14.34□□□□□ -0.11
GPC1-205ENST00000427506 C9orf66Q5T8R8 295 aa14.34□□□□□ -0.11
GPC1-205ENST00000427506 HACD4Q5VWC8 232 aa14.34□□□□□ -0.11
GPC1-205ENST00000427506 Q6ZS49 121 aa14.34□□□□□ -0.11
GPC1-205ENST00000427506 CASTOR1Q8WTX7 329 aa14.34□□□□□ -0.11
GPC1-205ENST00000427506 RNF167Q9H6Y7 350 aa14.34□□□□□ -0.11
GPC1-205ENST00000427506 NUBP2Q9Y5Y2 271 aa14.34□□□□□ -0.11
GPC1-205ENST00000427506 SEC14L6B5MCN3 397 aa14.33□□□□□ -0.12
GPC1-205ENST00000427506 I3L521 148 aa14.33□□□□□ -0.12
GPC1-205ENST00000427506 J3QRK9 145 aa14.33□□□□□ -0.12
GPC1-205ENST00000427506 SOX15O60248 233 aa14.33□□□□□ -0.12
GPC1-205ENST00000427506 CLEC2LP0C7M8 214 aa14.33□□□□□ -0.12
GPC1-205ENST00000427506 OR8U8P0C7N1 319 aa14.33□□□□□ -0.12
GPC1-205ENST00000427506 EGR2P11161 476 aaPredicted RBP14.33□□□□□ -0.12
GPC1-205ENST00000427506 LUMP51884 338 aaPredicted RBP14.33□□□□□ -0.12
GPC1-205ENST00000427506 GNG2P59768 71 aa14.33□□□□□ -0.12
GPC1-205ENST00000427506 GNB1P62873 340 aa14.33□□□□□ -0.12
GPC1-205ENST00000427506 PITPNAQ00169 270 aa14.33□□□□□ -0.12
GPC1-205ENST00000427506 TAGLNQ01995 201 aaKnown RBP14.33□□□□□ -0.12
GPC1-205ENST00000427506 ZNF616Q08AN1 781 aa14.33□□□□□ -0.12
GPC1-205ENST00000427506 RTL8BQ17RB0 113 aa14.33□□□□□ -0.12
GPC1-205ENST00000427506 C19orf54Q5BKX5 351 aa14.33□□□□□ -0.12
GPC1-205ENST00000427506 IDNKQ5T6J7 187 aa14.33□□□□□ -0.12
GPC1-205ENST00000427506 H1FOOQ8IZA3 346 aaPredicted RBP14.33□□□□□ -0.12
GPC1-205ENST00000427506 BVESQ8NE79 360 aa14.33□□□□□ -0.12
GPC1-205ENST00000427506 LFNGQ8NES3 379 aa14.33□□□□□ -0.12
GPC1-205ENST00000427506 GRPEL2Q8TAA5 225 aa14.33□□□□□ -0.12
GPC1-205ENST00000427506 NUDCD2Q8WVJ2 157 aa14.33□□□□□ -0.12
GPC1-205ENST00000427506 ARPC1AQ92747 370 aa14.33□□□□□ -0.12
GPC1-205ENST00000427506 TMEM235A6NFC5 223 aa14.32□□□□□ -0.12
GPC1-205ENST00000427506 SHOXO15266 292 aa14.32□□□□□ -0.12
GPC1-205ENST00000427506 CNIH1O95406 144 aa14.32□□□□□ -0.12
GPC1-205ENST00000427506 CTXN2P0C2S0 81 aa14.32□□□□□ -0.12
GPC1-205ENST00000427506 LGALS7P47929 136 aa14.32□□□□□ -0.12
GPC1-205ENST00000427506 RUNX1Q01196 453 aa14.32□□□□□ -0.12
GPC1-205ENST00000427506 FHL3Q13643 280 aa14.32□□□□□ -0.12
GPC1-205ENST00000427506 FXYD3Q14802 87 aa14.32□□□□□ -0.12
GPC1-205ENST00000427506 AKIRIN2Q53H80 203 aa14.32□□□□□ -0.12
GPC1-205ENST00000427506 PYHIN1Q6K0P9 492 aa14.32□□□□□ -0.12
GPC1-205ENST00000427506 HARBI1Q96MB7 349 aa14.32□□□□□ -0.12
GPC1-205ENST00000427506 MS4A10Q96PG2 267 aa14.32□□□□□ -0.12
GPC1-205ENST00000427506 DCSTAMPQ9H295 470 aa14.32□□□□□ -0.12
GPC1-205ENST00000427506 TPSG1Q9NRR2 321 aa14.32□□□□□ -0.12
GPC1-205ENST00000427506 RHBDL2Q9NX52 303 aa14.32□□□□□ -0.12
GPC1-205ENST00000427506 RRASP10301 218 aa14.31□□□□□ -0.12
GPC1-205ENST00000427506 ZNF260Q3ZCT1 412 aa14.31□□□□□ -0.12
GPC1-205ENST00000427506 C5orf30Q96GV9 206 aa14.31□□□□□ -0.12
GPC1-205ENST00000427506 ADTRPQ96IZ2 230 aa14.31□□□□□ -0.12
GPC1-205ENST00000427506 ALX4Q9H161 411 aaPredicted RBP14.31□□□□□ -0.12
GPC1-205ENST00000427506 ZNF355PQ9NSJ1 428 aa14.31□□□□□ -0.12
GPC1-205ENST00000427506 RAMP3O60896 148 aa14.3□□□□□ -0.12
GPC1-205ENST00000427506 NFYAP23511 347 aaPredicted RBP14.3□□□□□ -0.12
GPC1-205ENST00000427506 TPPP2P59282 170 aa14.3□□□□□ -0.12
GPC1-205ENST00000427506 OR5H6Q8NGV6 325 aa14.3□□□□□ -0.12
GPC1-205ENST00000427506 ETV7Q9Y603 341 aa14.3□□□□□ -0.12
GPC1-205ENST00000427506 ARPC1BO15143 372 aaKnown RBP14.29□□□□□ -0.12
GPC1-205ENST00000427506 IGLV2-23P01705 113 aa14.29□□□□□ -0.12
GPC1-205ENST00000427506 DUTP33316 252 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms