RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 RAB9BQ9NP90 201 aa11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 DMXL2Q8TDJ6 3036 aa11.6□□□□□ -0.55
APOBEC3D-202ENST00000427494 DSCAML1Q8TD84 2053 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 TRGV10A0A0A0MS01 117 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 M0R1X1 148 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 SNAPINO95295 136 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 ZNF134P52741 427 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 RPL39P5Q59GN2 51 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 TEX36Q5VZQ5 186 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 THNSL2Q86YJ6 484 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 LFNGQ8NES3 379 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 SCGB1C1Q8TD33 95 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 CD300LFQ8TDQ1 290 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 VKORC1Q9BQB6 163 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 FAM234AQ9H0X4 552 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 IFI27L2Q9H2X8 130 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 FBXO7Q9Y3I1 522 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 TRGV8A0A0C4DH27 118 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 KBTBD11-OT1A0A1B0GTJ5 212 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 GPR37O15354 613 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 SLC31A2O15432 143 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 FCGR3BO75015 233 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 PROP1O75360 226 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 RBMXL2O75526 392 aaKnown RBP11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 CD55P08174 381 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 NPBWR1P48145 328 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 PPT1P50897 306 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 UCNP55089 124 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 ZNF788Q6ZQV5 615 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 ZCCHC24Q8N2G6 241 aaKnown RBP11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 LEAP2Q969E1 77 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 R3HDM4Q96D70 268 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 PBDC1Q9BVG4 233 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 GFOD1Q9NXC2 390 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 CLN8Q9UBY8 286 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 PLCE1Q9P212 2302 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 USF3Q68DE3 2245 aa11.59□□□□□ -0.55
APOBEC3D-202ENST00000427494 ICE1Q9Y2F5 2266 aa11.58□□□□□ -0.55
APOBEC3D-202ENST00000427494 PIEZO2Q9H5I5 2752 aa11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 MARCH11A6NNE9 402 aa11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 ATF4P18848 351 aaPredicted RBP11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 TLE1Q04724 770 aa11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 SCRT1Q9BWW7 348 aa11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 NGBQ9NPG2 151 aa11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 DCHS1Q96JQ0 3298 aa11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 LOC105371267A0A1B0GV96 52 aa11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 A0A1W2PPE3 182 aa11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 NKX6-3A6NJ46 265 aa11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 HPRT1P00492 218 aa11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 H2AFB1P0C5Y9 115 aa11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 RAB7AP51149 207 aa11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 SLC38A11Q08AI6 406 aa11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 UTF1Q5T230 341 aa11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 OR8G2PQ6IF36 304 aa11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 TMEM14EPQ6UXP3 125 aa11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 TCF23Q7RTU1 214 aa11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 DTD1Q8TEA8 209 aa11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 OR4C12Q96R67 309 aa11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 RSG1Q9BU20 258 aa11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 SAP30LQ9HAJ7 183 aa11.58□□□□□ -0.56
APOBEC3D-202ENST00000427494 VSTM5A8MXK1 200 aa11.57□□□□□ -0.56
APOBEC3D-202ENST00000427494 ZG16O60844 167 aa11.57□□□□□ -0.56
APOBEC3D-202ENST00000427494 NFYBP25208 207 aa11.57□□□□□ -0.56
APOBEC3D-202ENST00000427494 TMEM88Q6PEY1 159 aa11.57□□□□□ -0.56
APOBEC3D-202ENST00000427494 SPSB3Q6PJ21 355 aa11.57□□□□□ -0.56
APOBEC3D-202ENST00000427494 DPPA3Q6W0C5 159 aa11.57□□□□□ -0.56
APOBEC3D-202ENST00000427494 ZDHHC16Q969W1 377 aa11.57□□□□□ -0.56
APOBEC3D-202ENST00000427494 EGLN1Q9GZT9 426 aa11.57□□□□□ -0.56
APOBEC3D-202ENST00000427494 IDI2-AS1Q9NZ38 188 aa11.57□□□□□ -0.56
APOBEC3D-202ENST00000427494 KPTNQ9Y664 436 aa11.57□□□□□ -0.56
APOBEC3D-202ENST00000427494 CEBPZOSA8MTT3 80 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 ITGB1BP1O14713 200 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 OR9G9P0C7N8 305 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 NDUFB7P17568 137 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 CASP6P55212 293 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 CCL20P78556 96 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 LRRC75BQ2VPJ9 315 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 SPINK9Q5DT21 86 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 SSX9Q7RTT3 188 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 S1PR3Q99500 378 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 PRELID3BQ9Y3B1 194 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 PTPRQQ9UMZ3 2332 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 CEP295Q9C0D2 2601 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 TRAV38-1A0A0B4J264 116 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 UBE2L5PA0A1B0GUS4 154 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 ZNF729A6NN14 1252 aaPredicted RBP11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 SHISA9B4DS77 424 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 TMPRSS2O15393 492 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 PPIHO43447 177 aaKnown RBP11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 KIR2DS2P43631 304 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 OR2B8PP59922 312 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 TLE4Q04727 773 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 CT45A1Q5HYN5 189 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 NCMAPQ5T1S8 102 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 PRAMEF5Q5TYX0 476 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 CBLN2Q8IUK8 224 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 CT45A3Q8NHU0 189 aa11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 CIB3Q96Q77 187 aaPredicted RBP11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 QTRT1Q9BXR0 403 aaKnown RBP11.56□□□□□ -0.56
APOBEC3D-202ENST00000427494 SAA2-SAA4A0A096LPE2 208 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms