RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 IL22RA2Q969J5 263 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 FAM90A26D6RGX4 464 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 CDKN1AP38936 164 aa11.78□□□□□ -0.52
RPL28-202ENST00000426763 HSPE1P61604 102 aaKnown RBP11.78□□□□□ -0.52
RPL28-202ENST00000426763 SELENOHQ8IZQ5 122 aaKnown RBP11.78□□□□□ -0.52
RPL28-202ENST00000426763 MRPL37Q9BZE1 423 aaKnown RBP11.78□□□□□ -0.52
RPL28-202ENST00000426763 NPDC1Q9NQX5 325 aaPredicted RBP11.78□□□□□ -0.52
RPL28-202ENST00000426763 NLRC5Q86WI3 1866 aa11.77□□□□□ -0.52
RPL28-202ENST00000426763 PQLC2LA1A4F0 135 aa11.77□□□□□ -0.52
RPL28-202ENST00000426763 MARCH11A6NNE9 402 aa11.77□□□□□ -0.52
RPL28-202ENST00000426763 C11orf94C9JXX5 98 aa11.77□□□□□ -0.52
RPL28-202ENST00000426763 CXorf1O96002 111 aa11.77□□□□□ -0.52
RPL28-202ENST00000426763 ZNF345Q14585 488 aa11.77□□□□□ -0.52
RPL28-202ENST00000426763 RBKSQ9H477 322 aa11.77□□□□□ -0.52
RPL28-202ENST00000426763 SDK2Q58EX2 2172 aa11.77□□□□□ -0.52
RPL28-202ENST00000426763 CDRT15L2A8MXV6 281 aa11.77□□□□□ -0.53
RPL28-202ENST00000426763 NTF3P20783 257 aa11.77□□□□□ -0.53
RPL28-202ENST00000426763 P2RY4P51582 365 aa11.77□□□□□ -0.53
RPL28-202ENST00000426763 UNC119Q13432 240 aa11.77□□□□□ -0.53
RPL28-202ENST00000426763 SLC35E3Q7Z769 313 aa11.77□□□□□ -0.53
RPL28-202ENST00000426763 GPR146Q96CH1 333 aa11.77□□□□□ -0.53
RPL28-202ENST00000426763 ARID1AO14497 2285 aa11.77□□□□□ -0.53
RPL28-202ENST00000426763 IGHV3OR16-10A0A075B7F0 116 aa11.77□□□□□ -0.53
RPL28-202ENST00000426763 CD74P04233 296 aa11.77□□□□□ -0.53
RPL28-202ENST00000426763 HIST1H1EP10412 219 aaKnown RBP11.77□□□□□ -0.53
RPL28-202ENST00000426763 NBL1P41271 181 aa11.77□□□□□ -0.53
RPL28-202ENST00000426763 CTXND1A0A1B0GTU2 59 aa11.77□□□□□ -0.53
RPL28-202ENST00000426763 MMP7P09237 267 aaPredicted RBP11.77□□□□□ -0.53
RPL28-202ENST00000426763 SELENOTP62341 195 aa11.77□□□□□ -0.53
RPL28-202ENST00000426763 TNFSF18Q9UNG2 199 aa11.77□□□□□ -0.53
RPL28-202ENST00000426763 FRMPD3Q5JV73 1810 aa11.76□□□□□ -0.53
RPL28-202ENST00000426763 LY6G6EA0A0G2JKS1 128 aa11.76□□□□□ -0.53
RPL28-202ENST00000426763 MPDU1O75352 247 aa11.76□□□□□ -0.53
RPL28-202ENST00000426763 SEC11BP0C7V7 166 aa11.76□□□□□ -0.53
RPL28-202ENST00000426763 PPOXP50336 477 aa11.76□□□□□ -0.53
RPL28-202ENST00000426763 GAS1P54826 345 aa11.76□□□□□ -0.53
RPL28-202ENST00000426763 DRAM1Q8N682 238 aa11.76□□□□□ -0.53
RPL28-202ENST00000426763 U3KQA8 63 aa11.76□□□□□ -0.53
RPL28-202ENST00000426763 C12orf77C9JDV5 145 aa11.76□□□□□ -0.53
RPL28-202ENST00000426763 ZNF362Q5T0B9 420 aaPredicted RBP11.76□□□□□ -0.53
RPL28-202ENST00000426763 ZNF818PQ6ZRF7 136 aa11.76□□□□□ -0.53
RPL28-202ENST00000426763 RTN4RL2Q86UN3 420 aa11.76□□□□□ -0.53
RPL28-202ENST00000426763 QTRT1Q9BXR0 403 aaKnown RBP11.76□□□□□ -0.53
RPL28-202ENST00000426763 DEDDO75618 318 aa11.76□□□□□ -0.53
RPL28-202ENST00000426763 RNFT1Q5M7Z0 435 aa11.76□□□□□ -0.53
RPL28-202ENST00000426763 WFDC3Q8IUB2 231 aa11.76□□□□□ -0.53
RPL28-202ENST00000426763 LINC00052Q96N35 136 aa11.76□□□□□ -0.53
RPL28-202ENST00000426763 DPM3Q9P2X0 92 aa11.76□□□□□ -0.53
RPL28-202ENST00000426763 RALGAPA1Q6GYQ0 2036 aa11.76□□□□□ -0.53
RPL28-202ENST00000426763 F5H697 171 aa11.76□□□□□ -0.53
RPL28-202ENST00000426763 LSM10Q969L4 123 aaKnown RBP11.76□□□□□ -0.53
RPL28-202ENST00000426763 A0A1W2PS18 150 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 ZG16O60844 167 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 S1PR2O95136 353 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 OR10J1P30954 320 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 IFITM3Q01628 133 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 ANKRD55Q3KP44 614 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 TMEM252Q8N6L7 170 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 CLDN34H7C241 214 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 PGA5P0DJD9 388 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 ATP6V0CP27449 155 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 VAX2Q9UIW0 290 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 PTPRDP23468 1912 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 PLXNA4Q9HCM2 1894 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 RGS13O14921 159 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 ZP3P21754 424 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 DPPA3Q6W0C5 159 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 C9orf62Q8N4C0 152 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 ST6GALNAC3Q8NDV1 305 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 C5orf66Q9H5L9 145 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 KBTBD11O94819 623 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 KIR2DL2P43627 348 aaPredicted RBP11.75□□□□□ -0.53
RPL28-202ENST00000426763 MFAP4P55083 255 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 RBM14Q96PK6 669 aaKnown RBP11.75□□□□□ -0.53
RPL28-202ENST00000426763 COL25A1Q9BXS0 654 aaPredicted RBP11.75□□□□□ -0.53
RPL28-202ENST00000426763 TOLLIPQ9H0E2 274 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 SLC2A8Q9NY64 477 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 KBTBD11-OT1A0A1B0GTJ5 212 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 NHLH2Q02577 135 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 C11orf91Q3C1V1 193 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 METTL26Q96S19 204 aa11.75□□□□□ -0.53
RPL28-202ENST00000426763 CEP250Q9BV73 2442 aa11.74□□□□□ -0.53
RPL28-202ENST00000426763 K7ENP7 123 aa11.74□□□□□ -0.53
RPL28-202ENST00000426763 IGFBP3P17936 291 aaPredicted RBP11.74□□□□□ -0.53
RPL28-202ENST00000426763 CCL1P22362 96 aa11.74□□□□□ -0.53
RPL28-202ENST00000426763 SERF2P84101 59 aa11.74□□□□□ -0.53
RPL28-202ENST00000426763 SIGLECL1Q8N7X8 197 aa11.74□□□□□ -0.53
RPL28-202ENST00000426763 LINC00312Q9Y6C7 94 aa11.74□□□□□ -0.53
RPL28-202ENST00000426763 SLC31A2O15432 143 aa11.74□□□□□ -0.53
RPL28-202ENST00000426763 IGHG3P01860 377 aa11.74□□□□□ -0.53
RPL28-202ENST00000426763 THBDP07204 575 aa11.74□□□□□ -0.53
RPL28-202ENST00000426763 GNLYP22749 145 aa11.74□□□□□ -0.53
RPL28-202ENST00000426763 RPEL1Q2QD12 228 aa11.74□□□□□ -0.53
RPL28-202ENST00000426763 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.74□□□□□ -0.53
RPL28-202ENST00000426763 GPHA2Q96T91 129 aa11.74□□□□□ -0.53
RPL28-202ENST00000426763 NAT8Q9UHE5 227 aa11.74□□□□□ -0.53
RPL28-202ENST00000426763 RPS11P62280 158 aaKnown RBP eCLIP11.74□□□□□ -0.53
RPL28-202ENST00000426763 HSD17B13Q7Z5P4 300 aaPredicted RBP11.74□□□□□ -0.53
RPL28-202ENST00000426763 PAXXQ9BUH6 204 aa11.74□□□□□ -0.53
RPL28-202ENST00000426763 PXMP4Q9Y6I8 212 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms