RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 OR5AC2Q9NZP5 309 aa12.85□□□□□ -0.35
SHOX2-202ENST00000425436 AUP1Q9Y679 476 aa12.85□□□□□ -0.35
SHOX2-202ENST00000425436 TEP1Q99973 2627 aaKnown RBP12.85□□□□□ -0.35
SHOX2-202ENST00000425436 WNK2Q9Y3S1 2297 aa12.85□□□□□ -0.35
SHOX2-202ENST00000425436 TRAV39A0A0B4J263 110 aa12.84□□□□□ -0.35
SHOX2-202ENST00000425436 RPS10-NUDT3A0A1W2PQS6 291 aa12.84□□□□□ -0.35
SHOX2-202ENST00000425436 ODAMA1E959 279 aa12.84□□□□□ -0.35
SHOX2-202ENST00000425436 CD5LO43866 347 aa12.84□□□□□ -0.35
SHOX2-202ENST00000425436 FOXH1O75593 365 aa12.84□□□□□ -0.35
SHOX2-202ENST00000425436 OR8U9P0C7N5 309 aa12.84□□□□□ -0.35
SHOX2-202ENST00000425436 TPT1P13693 172 aaKnown RBP12.84□□□□□ -0.35
SHOX2-202ENST00000425436 PVALBP20472 110 aaPredicted RBP12.84□□□□□ -0.35
SHOX2-202ENST00000425436 GLIPR1P48060 266 aa12.84□□□□□ -0.35
SHOX2-202ENST00000425436 OR4D5Q8NGN0 318 aa12.84□□□□□ -0.35
SHOX2-202ENST00000425436 OR8U1Q8NH10 309 aa12.84□□□□□ -0.35
SHOX2-202ENST00000425436 OR1L1Q8NH94 360 aa12.84□□□□□ -0.35
SHOX2-202ENST00000425436 MRGPRDQ8TDS7 321 aa12.84□□□□□ -0.35
SHOX2-202ENST00000425436 EDARADDQ8WWZ3 215 aa12.84□□□□□ -0.35
SHOX2-202ENST00000425436 ARL11Q969Q4 196 aa12.84□□□□□ -0.35
SHOX2-202ENST00000425436 ZC4H2Q9NQZ6 224 aa12.84□□□□□ -0.35
SHOX2-202ENST00000425436 YAE1D1Q9NRH1 226 aa12.84□□□□□ -0.35
SHOX2-202ENST00000425436 HIF1ANQ9NWT6 349 aa12.84□□□□□ -0.35
SHOX2-202ENST00000425436 SLC25A10Q9UBX3 287 aaPredicted RBP12.84□□□□□ -0.35
SHOX2-202ENST00000425436 POMT1Q9Y6A1 747 aa12.84□□□□□ -0.35
SHOX2-202ENST00000425436 A0A1B0GU03 582 aa12.83□□□□□ -0.35
SHOX2-202ENST00000425436 ATG12O94817 140 aa12.83□□□□□ -0.35
SHOX2-202ENST00000425436 SPDEFO95238 335 aa12.83□□□□□ -0.35
SHOX2-202ENST00000425436 MBPP02686 304 aaPredicted RBP12.83□□□□□ -0.35
SHOX2-202ENST00000425436 MMP9P14780 707 aa12.83□□□□□ -0.35
SHOX2-202ENST00000425436 NDUFB7P17568 137 aa12.83□□□□□ -0.35
SHOX2-202ENST00000425436 P2RY1P47900 373 aa12.83□□□□□ -0.35
SHOX2-202ENST00000425436 P2RX3P56373 397 aa12.83□□□□□ -0.35
SHOX2-202ENST00000425436 TMEM30BQ3MIR4 351 aa12.83□□□□□ -0.35
SHOX2-202ENST00000425436 LRRC10Q5BKY1 277 aa12.83□□□□□ -0.35
SHOX2-202ENST00000425436 EIF5AL1Q6IS14 154 aaKnown RBP12.83□□□□□ -0.35
SHOX2-202ENST00000425436 PDZD9Q8IXQ8 264 aa12.83□□□□□ -0.35
SHOX2-202ENST00000425436 LHFPL5Q8TAF8 219 aa12.83□□□□□ -0.35
SHOX2-202ENST00000425436 LSM10Q969L4 123 aaKnown RBP12.83□□□□□ -0.35
SHOX2-202ENST00000425436 TMEM186Q96B77 213 aa12.83□□□□□ -0.35
SHOX2-202ENST00000425436 OR2S2Q9NQN1 319 aa12.83□□□□□ -0.35
SHOX2-202ENST00000425436 KCNS2Q9ULS6 477 aa12.83□□□□□ -0.35
SHOX2-202ENST00000425436 LOC105371242A0A075B767 164 aa12.83□□□□□ -0.36
SHOX2-202ENST00000425436 HKR1P10072 659 aa12.83□□□□□ -0.36
SHOX2-202ENST00000425436 RPL12P30050 165 aaKnown RBP12.83□□□□□ -0.36
SHOX2-202ENST00000425436 CATR1Q13166 79 aa12.83□□□□□ -0.36
SHOX2-202ENST00000425436 ALKAL2Q6UX46 152 aa12.83□□□□□ -0.36
SHOX2-202ENST00000425436 OR13A1Q8NGR1 328 aa12.83□□□□□ -0.36
SHOX2-202ENST00000425436 H1FXQ92522 213 aaKnown RBP12.83□□□□□ -0.36
SHOX2-202ENST00000425436 RRNAD1Q96FB5 475 aaKnown RBP12.83□□□□□ -0.36
SHOX2-202ENST00000425436 JPT1Q9UK76 154 aa12.83□□□□□ -0.36
SHOX2-202ENST00000425436 LSM5Q9Y4Y9 91 aaKnown RBP12.83□□□□□ -0.36
SHOX2-202ENST00000425436 A8MXK9 166 aa12.82□□□□□ -0.36
SHOX2-202ENST00000425436 C22orf46C9J442 243 aa12.82□□□□□ -0.36
SHOX2-202ENST00000425436 C15orf65H3BRN8 121 aa12.82□□□□□ -0.36
SHOX2-202ENST00000425436 SCGB1D2O95969 90 aa12.82□□□□□ -0.36
SHOX2-202ENST00000425436 IGLV2-14P01704 120 aa12.82□□□□□ -0.36
SHOX2-202ENST00000425436 NKX2-1P43699 371 aaPredicted RBP12.82□□□□□ -0.36
SHOX2-202ENST00000425436 EDDM3AQ14507 147 aa12.82□□□□□ -0.36
SHOX2-202ENST00000425436 NMSQ5H8A3 153 aa12.82□□□□□ -0.36
SHOX2-202ENST00000425436 ZNF66Q6ZN08 573 aa12.82□□□□□ -0.36
SHOX2-202ENST00000425436 BAP18Q8IXM2 172 aa12.82□□□□□ -0.36
SHOX2-202ENST00000425436 TRAV20A0A0B4J274 112 aa12.81□□□□□ -0.36
SHOX2-202ENST00000425436 ITGB1BP1O14713 200 aa12.81□□□□□ -0.36
SHOX2-202ENST00000425436 TNFSF12O43508 249 aa12.81□□□□□ -0.36
SHOX2-202ENST00000425436 GPR137BO60478 399 aa12.81□□□□□ -0.36
SHOX2-202ENST00000425436 YPEL1O60688 119 aa12.81□□□□□ -0.36
SHOX2-202ENST00000425436 JTBO76095 146 aa12.81□□□□□ -0.36
SHOX2-202ENST00000425436 RRASP10301 218 aa12.81□□□□□ -0.36
SHOX2-202ENST00000425436 DVL1P1P54792 670 aaPredicted RBP12.81□□□□□ -0.36
SHOX2-202ENST00000425436 PAX2Q02962 417 aa12.81□□□□□ -0.36
SHOX2-202ENST00000425436 FOXRED2Q8IWF2 684 aa12.81□□□□□ -0.36
SHOX2-202ENST00000425436 DRAM1Q8N682 238 aa12.81□□□□□ -0.36
SHOX2-202ENST00000425436 OR52L2PQ8NGH6 319 aa12.81□□□□□ -0.36
SHOX2-202ENST00000425436 OR51H1Q8NH63 302 aa12.81□□□□□ -0.36
SHOX2-202ENST00000425436 YPEL2Q96QA6 119 aa12.81□□□□□ -0.36
SHOX2-202ENST00000425436 ANKRD34BA5PLL1 514 aa12.8□□□□□ -0.36
SHOX2-202ENST00000425436 LEUTXA8MZ59 168 aa12.8□□□□□ -0.36
SHOX2-202ENST00000425436 F2RL2O00254 374 aa12.8□□□□□ -0.36
SHOX2-202ENST00000425436 GAPDHP04406 335 aaKnown RBP12.8□□□□□ -0.36
SHOX2-202ENST00000425436 FAM219AQ8IW50 185 aa12.8□□□□□ -0.36
SHOX2-202ENST00000425436 OR52M1Q8NGK5 317 aa12.8□□□□□ -0.36
SHOX2-202ENST00000425436 CD300LFQ8TDQ1 290 aa12.8□□□□□ -0.36
SHOX2-202ENST00000425436 HSD17B10Q99714 261 aaKnown RBP12.8□□□□□ -0.36
SHOX2-202ENST00000425436 PFDN2Q9UHV9 154 aa12.8□□□□□ -0.36
SHOX2-202ENST00000425436 POLR3KQ9Y2Y1 108 aaPredicted RBP12.8□□□□□ -0.36
SHOX2-202ENST00000425436 TRGV10A0A0A0MS01 117 aa12.79□□□□□ -0.36
SHOX2-202ENST00000425436 IGHV2-70DA0A0C4DH43 119 aa12.79□□□□□ -0.36
SHOX2-202ENST00000425436 MEX3AA1L020 520 aaKnown RBP12.79□□□□□ -0.36
SHOX2-202ENST00000425436 NMBP08949 121 aa12.79□□□□□ -0.36
SHOX2-202ENST00000425436 EDDM3BP56851 147 aa12.79□□□□□ -0.36
SHOX2-202ENST00000425436 ID3Q02535 119 aa12.79□□□□□ -0.36
SHOX2-202ENST00000425436 TPRX1Q8N7U7 411 aa12.79□□□□□ -0.36
SHOX2-202ENST00000425436 CORO2AQ92828 525 aa12.79□□□□□ -0.36
SHOX2-202ENST00000425436 CITED4Q96RK1 184 aa12.79□□□□□ -0.36
SHOX2-202ENST00000425436 DCTN5Q9BTE1 182 aa12.79□□□□□ -0.36
SHOX2-202ENST00000425436 SLC25A31Q9H0C2 315 aa12.79□□□□□ -0.36
SHOX2-202ENST00000425436 OR2D2Q9H210 308 aa12.79□□□□□ -0.36
SHOX2-202ENST00000425436 CYTL1Q9NRR1 136 aa12.79□□□□□ -0.36
SHOX2-202ENST00000425436 RPUSD1Q9UJJ7 312 aaKnown RBP12.79□□□□□ -0.36
SHOX2-202ENST00000425436 GAB2Q9UQC2 676 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms