RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 ST6GALNAC5Q9BVH7 336 aa13.92□□□□□ -0.18
SBDSP1-202ENST00000423945 KLK15Q9H2R5 256 aa13.92□□□□□ -0.18
SBDSP1-202ENST00000423945 SOX15O60248 233 aa13.91□□□□□ -0.18
SBDSP1-202ENST00000423945 IGLV1-40P01703 118 aa13.91□□□□□ -0.18
SBDSP1-202ENST00000423945 IGLV2-23P01705 113 aa13.91□□□□□ -0.18
SBDSP1-202ENST00000423945 PDPNQ86YL7 162 aa13.91□□□□□ -0.18
SBDSP1-202ENST00000423945 MINDY2Q8NBR6 621 aa13.91□□□□□ -0.18
SBDSP1-202ENST00000423945 GINS4Q9BRT9 223 aa13.91□□□□□ -0.18
SBDSP1-202ENST00000423945 DCSTAMPQ9H295 470 aa13.91□□□□□ -0.18
SBDSP1-202ENST00000423945 TPSG1Q9NRR2 321 aa13.91□□□□□ -0.18
SBDSP1-202ENST00000423945 AURKAIP1Q9NWT8 199 aaPredicted RBP13.91□□□□□ -0.18
SBDSP1-202ENST00000423945 ETV7Q9Y603 341 aa13.91□□□□□ -0.18
SBDSP1-202ENST00000423945 TRAV41A0A0B4J266 112 aa13.9□□□□□ -0.18
SBDSP1-202ENST00000423945 AIREO43918 545 aa13.9□□□□□ -0.18
SBDSP1-202ENST00000423945 SCGNO76038 276 aa13.9□□□□□ -0.18
SBDSP1-202ENST00000423945 OR5H8P0DN80 308 aa13.9□□□□□ -0.18
SBDSP1-202ENST00000423945 ZNF660Q6AZW8 331 aaPredicted RBP13.9□□□□□ -0.18
SBDSP1-202ENST00000423945 CLCC1Q96S66 551 aa13.9□□□□□ -0.18
SBDSP1-202ENST00000423945 SLC35D1Q9NTN3 355 aa13.9□□□□□ -0.18
SBDSP1-202ENST00000423945 NECAP2Q9NVZ3 263 aa13.9□□□□□ -0.18
SBDSP1-202ENST00000423945 METTL1Q9UBP6 276 aaKnown RBP13.9□□□□□ -0.18
SBDSP1-202ENST00000423945 NUBP2Q9Y5Y2 271 aa13.9□□□□□ -0.18
SBDSP1-202ENST00000423945 TRAV18A0A075B6X5 111 aa13.89□□□□□ -0.19
SBDSP1-202ENST00000423945 CCL24O00175 119 aa13.89□□□□□ -0.19
SBDSP1-202ENST00000423945 APOA2P02652 100 aa13.89□□□□□ -0.19
SBDSP1-202ENST00000423945 RPS19P39019 145 aaKnown RBP13.89□□□□□ -0.19
SBDSP1-202ENST00000423945 RPS16P62249 146 aaKnown RBP13.89□□□□□ -0.19
SBDSP1-202ENST00000423945 LSM3P62310 102 aaKnown RBP13.89□□□□□ -0.19
SBDSP1-202ENST00000423945 SSBP2P81877 361 aaPredicted RBP13.89□□□□□ -0.19
SBDSP1-202ENST00000423945 PITPNAQ00169 270 aa13.89□□□□□ -0.19
SBDSP1-202ENST00000423945 ZNF491Q8N8L2 437 aa13.89□□□□□ -0.19
SBDSP1-202ENST00000423945 DDB2Q92466 427 aa13.89□□□□□ -0.19
SBDSP1-202ENST00000423945 GNB4Q9HAV0 340 aa13.89□□□□□ -0.19
SBDSP1-202ENST00000423945 SPATA2Q9UM82 520 aa13.89□□□□□ -0.19
SBDSP1-202ENST00000423945 LINC00473A8K010 186 aa13.88□□□□□ -0.19
SBDSP1-202ENST00000423945 SPDEFO95238 335 aa13.88□□□□□ -0.19
SBDSP1-202ENST00000423945 CA2P00918 260 aa13.88□□□□□ -0.19
SBDSP1-202ENST00000423945 CRYGBP07316 175 aa13.88□□□□□ -0.19
SBDSP1-202ENST00000423945 PTHLHP12272 177 aa13.88□□□□□ -0.19
SBDSP1-202ENST00000423945 NFYAP23511 347 aaPredicted RBP13.88□□□□□ -0.19
SBDSP1-202ENST00000423945 DUTP33316 252 aaKnown RBP13.88□□□□□ -0.19
SBDSP1-202ENST00000423945 GNG2P59768 71 aa13.88□□□□□ -0.19
SBDSP1-202ENST00000423945 KRTAP10-11P60412 298 aa13.88□□□□□ -0.19
SBDSP1-202ENST00000423945 PLGLAQ15195 96 aa13.88□□□□□ -0.19
SBDSP1-202ENST00000423945 ECSCRQ19T08 205 aa13.88□□□□□ -0.19
SBDSP1-202ENST00000423945 TIMM50Q3ZCQ8 353 aa13.88□□□□□ -0.19
SBDSP1-202ENST00000423945 GVQW1Q8N7I0 195 aa13.88□□□□□ -0.19
SBDSP1-202ENST00000423945 BVESQ8NE79 360 aa13.88□□□□□ -0.19
SBDSP1-202ENST00000423945 C4orf3Q8WVX3 66 aa13.88□□□□□ -0.19
SBDSP1-202ENST00000423945 FLYWCH2Q96CP2 140 aaKnown RBP13.88□□□□□ -0.19
SBDSP1-202ENST00000423945 TSNAXQ99598 290 aaKnown RBP13.88□□□□□ -0.19
SBDSP1-202ENST00000423945 FAM103A1Q9BTL3 118 aaKnown RBP13.88□□□□□ -0.19
SBDSP1-202ENST00000423945 ANXA10Q9UJ72 324 aa13.88□□□□□ -0.19
SBDSP1-202ENST00000423945 IGKV1D-13A0A0B4J2D9 117 aa13.87□□□□□ -0.19
SBDSP1-202ENST00000423945 SRRM4A7MD48 611 aaKnown RBP13.87□□□□□ -0.19
SBDSP1-202ENST00000423945 I3L521 148 aa13.87□□□□□ -0.19
SBDSP1-202ENST00000423945 J3QRK9 145 aa13.87□□□□□ -0.19
SBDSP1-202ENST00000423945 ARPC1BO15143 372 aaKnown RBP13.87□□□□□ -0.19
SBDSP1-202ENST00000423945 SLC25A17O43808 307 aa13.87□□□□□ -0.19
SBDSP1-202ENST00000423945 IGLV2-14P01704 120 aa13.87□□□□□ -0.19
SBDSP1-202ENST00000423945 HLA-DQB1P01920 261 aa13.87□□□□□ -0.19
SBDSP1-202ENST00000423945 IGKV1-13P0DP09 117 aa13.87□□□□□ -0.19
SBDSP1-202ENST00000423945 FHL3Q13643 280 aa13.87□□□□□ -0.19
SBDSP1-202ENST00000423945 MRGPRG-AS1Q2M3A8 158 aa13.87□□□□□ -0.19
SBDSP1-202ENST00000423945 TMEM177Q53S58 311 aa13.87□□□□□ -0.19
SBDSP1-202ENST00000423945 CNIH2Q6PI25 160 aa13.87□□□□□ -0.19
SBDSP1-202ENST00000423945 ZNF562Q6V9R5 426 aa13.87□□□□□ -0.19
SBDSP1-202ENST00000423945 REC114Q7Z4M0 266 aa13.87□□□□□ -0.19
SBDSP1-202ENST00000423945 CASTOR1Q8WTX7 329 aa13.87□□□□□ -0.19
SBDSP1-202ENST00000423945 UBE2E2Q96LR5 201 aa13.87□□□□□ -0.19
SBDSP1-202ENST00000423945 AUNIPQ9H7T9 357 aa13.87□□□□□ -0.19
SBDSP1-202ENST00000423945 OR2W1Q9Y3N9 320 aa13.87□□□□□ -0.19
SBDSP1-202ENST00000423945 RBM7Q9Y580 266 aaKnown RBP13.87□□□□□ -0.19
SBDSP1-202ENST00000423945 A3GALT2U3KPV4 340 aa13.87□□□□□ -0.19
SBDSP1-202ENST00000423945 TNCP24821 2201 aa13.86□□□□□ -0.19
SBDSP1-202ENST00000423945 A0A0A6YYH2 397 aa13.86□□□□□ -0.19
SBDSP1-202ENST00000423945 A0A1W2PN81 502 aa13.86□□□□□ -0.19
SBDSP1-202ENST00000423945 A6NJ64 397 aa13.86□□□□□ -0.19
SBDSP1-202ENST00000423945 TUSC2O75896 110 aa13.86□□□□□ -0.19
SBDSP1-202ENST00000423945 DUS4LO95620 317 aaKnown RBP13.86□□□□□ -0.19
SBDSP1-202ENST00000423945 CTXN2P0C2S0 81 aa13.86□□□□□ -0.19
SBDSP1-202ENST00000423945 SMIM18P0DKX4 95 aa13.86□□□□□ -0.19
SBDSP1-202ENST00000423945 HOXD3P31249 432 aaPredicted RBP13.86□□□□□ -0.19
SBDSP1-202ENST00000423945 CHRNA7P36544 502 aa13.86□□□□□ -0.19
SBDSP1-202ENST00000423945 RAB9AP51151 201 aa13.86□□□□□ -0.19
SBDSP1-202ENST00000423945 EGFEM1PQ0D2K5 195 aa13.86□□□□□ -0.19
SBDSP1-202ENST00000423945 PJVKQ0ZLH3 352 aa13.86□□□□□ -0.19
SBDSP1-202ENST00000423945 ASPHD1Q5U4P2 390 aa13.86□□□□□ -0.19
SBDSP1-202ENST00000423945 VCX3AQ9NNX9 186 aa13.86□□□□□ -0.19
SBDSP1-202ENST00000423945 TMEM127O75204 238 aa13.85□□□□□ -0.19
SBDSP1-202ENST00000423945 GNB1P62873 340 aa13.85□□□□□ -0.19
SBDSP1-202ENST00000423945 PPP1R27Q86WC6 154 aa13.85□□□□□ -0.19
SBDSP1-202ENST00000423945 HOGA1Q86XE5 327 aa13.85□□□□□ -0.19
SBDSP1-202ENST00000423945 ZNF645Q8N7E2 425 aa13.85□□□□□ -0.19
SBDSP1-202ENST00000423945 LFNGQ8NES3 379 aa13.85□□□□□ -0.19
SBDSP1-202ENST00000423945 HARBI1Q96MB7 349 aa13.85□□□□□ -0.19
SBDSP1-202ENST00000423945 FUNDC2Q9BWH2 189 aa13.85□□□□□ -0.19
SBDSP1-202ENST00000423945 FOXA2Q9Y261 457 aaPredicted RBP13.85□□□□□ -0.19
SBDSP1-202ENST00000423945 K7EIL1 84 aa13.84□□□□□ -0.19
SBDSP1-202ENST00000423945 LGALS7P47929 136 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms