RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 EPM2AB3EWF7 344 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 RTL8CO15255 209 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 RGS16O15492 202 aaPredicted RBP3.58□□□□□ -1.84
SFXN1-202ENST00000421887 AIREO43918 545 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 DHRS3O75911 302 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 INAFM2P0DMQ5 153 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 ZNF44P15621 663 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 PRKACAP17612 351 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 IFNGR2P38484 337 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 BRWD1-AS2P59051 145 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 DGCR6Q14129 220 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 RPEL1Q2QD12 228 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 DEFB135Q30KP9 77 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 MOGAT2Q3SYC2 334 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 ACTBL2Q562R1 376 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 SLC35D3Q5M8T2 416 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 RPL13AP3Q6NVV1 102 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 EPGNQ6UW88 154 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 SLC25A26Q70HW3 274 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 FAM58AQ8N1B3 248 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 ZNF645Q8N7E2 425 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 MINDY2Q8NBR6 621 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 OR2T12Q8NG77 320 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 OR51E1Q8TCB6 317 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.58□□□□□ -1.84
SFXN1-202ENST00000421887 RCN3Q96D15 328 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 ZNF251Q9BRH9 671 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 TPPP3Q9BW30 176 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 EXOSC4Q9NPD3 245 aaKnown RBP3.58□□□□□ -1.84
SFXN1-202ENST00000421887 GPR84Q9NQS5 396 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 IDI2-AS1Q9NZ38 188 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 GSTK1Q9Y2Q3 226 aa3.58□□□□□ -1.84
SFXN1-202ENST00000421887 MEIKINA0A087WXM9 373 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 A0A0G2JLM5 398 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 TRBV4-1A0A0J9YWV2 114 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 MSGN1A6NI15 193 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 ACOD1A6NK06 481 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 C11orf94C9JXX5 98 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 SNNO75324 88 aaPredicted RBP3.57□□□□□ -1.84
SFXN1-202ENST00000421887 CLN5O75503 358 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 OR2H2O95918 312 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 IFNGP01579 166 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 HLA-DRB1P01911 266 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 TRGV3P03979 118 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 CSN2P05814 226 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 SPI1P17947 270 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 PRDX6P30041 224 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 BLVRBP30043 206 aaPredicted RBP3.57□□□□□ -1.84
SFXN1-202ENST00000421887 HTR1FP30939 366 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 NUDT2P50583 147 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 GZMMP51124 257 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 PDZK1IP1Q13113 114 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 KLF5Q13887 457 aaPredicted RBP3.57□□□□□ -1.84
SFXN1-202ENST00000421887 ATXN7L3Q14CW9 347 aaPredicted RBP3.57□□□□□ -1.84
SFXN1-202ENST00000421887 ZNF146Q15072 292 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 PLGLAQ15195 96 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 C17orf58Q2M2W7 97 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 ANKRD55Q3KP44 614 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 TMEM30BQ3MIR4 351 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 SAMD4BQ5PRF9 694 aaKnown RBP3.57□□□□□ -1.84
SFXN1-202ENST00000421887 UTF1Q5T230 341 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 UNQ5815/PRO19632Q6UWF5 114 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 SLC37A3Q8NCC5 494 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 OR8J3Q8NGG0 315 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 OR52B4Q8NGK2 314 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 ZNRF4Q8WWF5 429 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 RTN4IP1Q8WWV3 396 aaPredicted RBP3.57□□□□□ -1.84
SFXN1-202ENST00000421887 ANP32BQ92688 251 aaKnown RBP3.57□□□□□ -1.84
SFXN1-202ENST00000421887 BORCS8Q96FH0 119 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 SPACA5Q96QH8 159 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 OSBPL10Q9BXB5 764 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 MROQ9BYG7 248 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 ANKRD60Q9BZ19 345 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 RBFOX1Q9NWB1 397 aaKnown RBP3.57□□□□□ -1.84
SFXN1-202ENST00000421887 CALYQ9NYX4 217 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 CNOT2Q9NZN8 540 aaKnown RBP3.57□□□□□ -1.84
SFXN1-202ENST00000421887 EXTL2Q9UBQ6 330 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 PSORS1C1Q9UIG5 152 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 HECTD4Q9Y4D8 3996 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 ENPP4Q9Y6X5 453 aa3.57□□□□□ -1.84
SFXN1-202ENST00000421887 IGHV7-81A0A0B4J1V7 117 aa3.56□□□□□ -1.84
SFXN1-202ENST00000421887 A0A0U1RRA0 63 aa3.56□□□□□ -1.84
SFXN1-202ENST00000421887 A6NIN4 97 aa3.56□□□□□ -1.84
SFXN1-202ENST00000421887 RIIAD1A6NNX1 92 aa3.56□□□□□ -1.84
SFXN1-202ENST00000421887 FAM220BPB1ANY3 271 aa3.56□□□□□ -1.84
SFXN1-202ENST00000421887 ZNF736B4DX44 427 aaPredicted RBP3.56□□□□□ -1.84
SFXN1-202ENST00000421887 NBR2O15453 112 aa3.56□□□□□ -1.84
SFXN1-202ENST00000421887 SOX15O60248 233 aa3.56□□□□□ -1.84
SFXN1-202ENST00000421887 GATBO75879 557 aaKnown RBP3.56□□□□□ -1.84
SFXN1-202ENST00000421887 OR2A4O95047 310 aa3.56□□□□□ -1.84
SFXN1-202ENST00000421887 GADD45GO95257 159 aa3.56□□□□□ -1.84
SFXN1-202ENST00000421887 SERPINA3P01011 423 aa3.56□□□□□ -1.84
SFXN1-202ENST00000421887 OCM2P0CE71 109 aa3.56□□□□□ -1.84
SFXN1-202ENST00000421887 OCMP0CE72 109 aaPredicted RBP3.56□□□□□ -1.84
SFXN1-202ENST00000421887 RBMY1CP0DJD4 496 aa3.56□□□□□ -1.84
SFXN1-202ENST00000421887 P0DMU3 169 aa3.56□□□□□ -1.84
SFXN1-202ENST00000421887 FAM231AP0DMU4 169 aa3.56□□□□□ -1.84
SFXN1-202ENST00000421887 FAM231CP0DMU5 169 aa3.56□□□□□ -1.84
SFXN1-202ENST00000421887 CALCBP10092 127 aa3.56□□□□□ -1.84
SFXN1-202ENST00000421887 CLUP10909 449 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms