RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 CAPSLQ8WWF8 208 aa10.07□□□□□ -0.8
TMEM53-206ENST00000420706 DDB2Q92466 427 aa10.07□□□□□ -0.8
TMEM53-206ENST00000420706 ADTRPQ96IZ2 230 aa10.07□□□□□ -0.8
TMEM53-206ENST00000420706 FLNAP21333 2647 aaKnown RBP10.06□□□□□ -0.8
TMEM53-206ENST00000420706 CRYM-AS1A6NIL9 109 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 RNF212BA8MTL3 300 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 HNF1AP20823 631 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 F2RP25116 425 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 SRP14P37108 136 aaKnown RBP10.06□□□□□ -0.8
TMEM53-206ENST00000420706 RAG2P55895 527 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 RAB25P57735 213 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 BRWD1-AS2P59051 145 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 TAS2R31P59538 309 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 CATR1Q13166 79 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 TRIM16LQ309B1 348 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 DEFB112Q30KQ8 113 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 TMEM128Q5BJH2 165 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 KCTD9Q7L273 389 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 SGPP2Q8IWX5 399 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 MINDY2Q8NBR6 621 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 OR5AN1Q8NGI8 311 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 OR51H1Q8NH63 302 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 CHPT1Q8WUD6 406 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 TCTEX1D2Q8WW35 142 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 C22orf15Q8WYQ4 148 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 CFHR4Q92496 578 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 BEX2Q9BXY8 128 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 NAA60Q9H7X0 242 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 BEX1Q9HBH7 125 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 FAM96BQ9Y3D0 163 aa10.06□□□□□ -0.8
TMEM53-206ENST00000420706 ACANP16112 2415 aa10.05□□□□□ -0.8
TMEM53-206ENST00000420706 IGHV3-72A0A0B4J1Y9 119 aa10.05□□□□□ -0.8
TMEM53-206ENST00000420706 TEX13DA0A0J9YY54 714 aaPredicted RBP10.05□□□□□ -0.8
TMEM53-206ENST00000420706 C3orf85A0A1B0GTC6 90 aa10.05□□□□□ -0.8
TMEM53-206ENST00000420706 FAM90A9PA6NNJ1 464 aa10.05□□□□□ -0.8
TMEM53-206ENST00000420706 H0YJW9 148 aa10.05□□□□□ -0.8
TMEM53-206ENST00000420706 TIMM23O14925 209 aa10.05□□□□□ -0.8
TMEM53-206ENST00000420706 PEX14O75381 377 aa10.05□□□□□ -0.8
TMEM53-206ENST00000420706 IL5P05113 134 aa10.05□□□□□ -0.8
TMEM53-206ENST00000420706 FBP1P09467 338 aa10.05□□□□□ -0.8
TMEM53-206ENST00000420706 OR4E1P0C645 316 aa10.05□□□□□ -0.8
TMEM53-206ENST00000420706 CD1BP29016 333 aa10.05□□□□□ -0.8
TMEM53-206ENST00000420706 MC5RP33032 325 aa10.05□□□□□ -0.8
TMEM53-206ENST00000420706 UBE2MP61081 183 aaKnown RBP10.05□□□□□ -0.8
TMEM53-206ENST00000420706 SUPT4H1P63272 117 aaKnown RBP10.05□□□□□ -0.8
TMEM53-206ENST00000420706 TAGLNQ01995 201 aaKnown RBP10.05□□□□□ -0.8
TMEM53-206ENST00000420706 PPP1R1AQ13522 171 aa10.05□□□□□ -0.8
TMEM53-206ENST00000420706 HABP2Q14520 560 aaPredicted RBP10.05□□□□□ -0.8
TMEM53-206ENST00000420706 TUSC1Q2TAM9 212 aa10.05□□□□□ -0.8
TMEM53-206ENST00000420706 RBMXL1Q96E39 390 aaKnown RBP10.05□□□□□ -0.8
TMEM53-206ENST00000420706 GALNT14Q96FL9 552 aa10.05□□□□□ -0.8
TMEM53-206ENST00000420706 PRDM13Q9H4Q3 707 aa10.05□□□□□ -0.8
TMEM53-206ENST00000420706 SLC35D1Q9NTN3 355 aa10.05□□□□□ -0.8
TMEM53-206ENST00000420706 KCNIP3Q9Y2W7 256 aa10.05□□□□□ -0.8
TMEM53-206ENST00000420706 PRELID3BQ9Y3B1 194 aa10.05□□□□□ -0.8
TMEM53-206ENST00000420706 MAP1AP78559 2803 aaPredicted RBP10.04□□□□□ -0.8
TMEM53-206ENST00000420706 MDFIC2A0A1B0GVS7 189 aa10.04□□□□□ -0.8
TMEM53-206ENST00000420706 FCGR3BO75015 233 aa10.04□□□□□ -0.8
TMEM53-206ENST00000420706 SFT2D2O95562 160 aa10.04□□□□□ -0.8
TMEM53-206ENST00000420706 DHFRP00374 187 aa10.04□□□□□ -0.8
TMEM53-206ENST00000420706 OR5AC1P0C628 307 aa10.04□□□□□ -0.8
TMEM53-206ENST00000420706 RRASP10301 218 aa10.04□□□□□ -0.8
TMEM53-206ENST00000420706 BRS3P32247 399 aa10.04□□□□□ -0.8
TMEM53-206ENST00000420706 RAB13P51153 203 aa10.04□□□□□ -0.8
TMEM53-206ENST00000420706 DYNLT3P51808 116 aa10.04□□□□□ -0.8
TMEM53-206ENST00000420706 SP6Q3SY56 376 aa10.04□□□□□ -0.8
TMEM53-206ENST00000420706 ZNF585BQ52M93 769 aa10.04□□□□□ -0.8
TMEM53-206ENST00000420706 THNSL2Q86YJ6 484 aa10.04□□□□□ -0.8
TMEM53-206ENST00000420706 SPAG16Q8N0X2 631 aa10.04□□□□□ -0.8
TMEM53-206ENST00000420706 TCTEX1D1Q8N7M0 179 aa10.04□□□□□ -0.8
TMEM53-206ENST00000420706 GLYATL2Q8WU03 294 aa10.04□□□□□ -0.8
TMEM53-206ENST00000420706 ZNF48Q96MX3 618 aaPredicted RBP10.04□□□□□ -0.8
TMEM53-206ENST00000420706 TP53RKQ96S44 253 aa10.04□□□□□ -0.8
TMEM53-206ENST00000420706 C9orf170A2RU37 121 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 VGLL3A8MV65 326 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 INAFM1C9JVW0 142 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 H0Y980 276 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 RBFOX2O43251 390 aaKnown RBP eCLIP10.03□□□□□ -0.8
TMEM53-206ENST00000420706 RAMP3O60896 148 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 B3GALNT1O75752 331 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 VENTXO95231 258 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 APOA2P02652 100 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 UCP1P25874 307 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 KIR2DS2P43631 304 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 LPAR6P43657 344 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 ARHGDIBP52566 201 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 EBI3Q14213 229 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 TMEM187Q14656 261 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 SLC9A3R2Q15599 337 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 AANATQ16613 207 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 C4orf46Q504U0 113 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 OR2B11Q5JQS5 317 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 C11orf88Q6PI97 169 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 Q6YL49 198 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 LYG2Q86SG7 212 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 PDPNQ86YL7 162 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 OR52B4Q8NGK2 314 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 PIFOQ8TCI5 191 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 CD300LFQ8TDQ1 290 aa10.03□□□□□ -0.8
TMEM53-206ENST00000420706 SSX3Q99909 188 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms