RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 CLEC3BP05452 202 aa12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 COX7A1P24310 79 aa12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 RUNX1Q01196 453 aa12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 RASL11BQ9BPW5 248 aa12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 MRPL32Q9BYC8 188 aaKnown RBP12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 AKIRIN1Q9H9L7 192 aaPredicted RBP12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 BARX1Q9HBU1 254 aaPredicted RBP12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 ZNF785A8K8V0 405 aa12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 VENTXO95231 258 aa12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 OR4A8P0C604 315 aa12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 CRISP2P16562 243 aa12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 CSRP1P21291 193 aaKnown RBP12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 RPL8P62917 257 aaKnown RBP12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 ZIC4Q8N9L1 334 aa12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 FGF16O43320 207 aa12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 LGALS7P47929 136 aa12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 FA2HQ7L5A8 372 aa12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 OR4X1Q8NH49 305 aa12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 Q8WTZ3 238 aa12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 TLNRD1Q9H1K6 362 aa12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 TMEM140Q9NV12 185 aa12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 EFNA2O43921 213 aa12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 LDLRAD3Q86YD5 345 aa12.6□□□□□ -0.39
AP000550.1-201ENST00000420508 FAM90A9PA6NNJ1 464 aa12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 C9orf172C9J069 976 aa12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 CEACAM1P13688 526 aa12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 RPL27AP46776 148 aaKnown RBP12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 SSMEM1Q8WWF3 244 aa12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 ISOC2Q96AB3 205 aa12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 COL4A4P53420 1690 aaPredicted RBP12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 A0A0G2JMM0 328 aa12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 A0A1W2PPB8 328 aa12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 A0A1W2PRS3 328 aa12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 KIR3DP1A8MWS1 328 aa12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 PHOX2AO14813 284 aa12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 MEF2CQ06413 473 aaPredicted RBP12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 ZNF71Q9NQZ8 489 aaPredicted RBP12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 CLCF1Q9UBD9 225 aa12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 C2orf68Q2NKX9 166 aa12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 RAB24Q969Q5 203 aa12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 CCL13Q99616 98 aa12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 RSG1Q9BU20 258 aa12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 LOC102723971A0A1B0GUV8 181 aa12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 GGNQ86UU5 652 aa12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 MEGF10Q96KG7 1140 aa12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 TUBA4BQ9H853 241 aa12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 CLDN16Q9Y5I7 305 aa12.59□□□□□ -0.39
AP000550.1-201ENST00000420508 OTX1P32242 354 aaPredicted RBP12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 Q6ZS49 121 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 OR1B1Q8NGR6 318 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 OR9G1Q8NH87 305 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 COA4Q9NYJ1 87 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 ERVS71-1P61550 626 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 LYZP61626 148 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 LRRC75BQ2VPJ9 315 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 ZNF826PQ6ZT77 177 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 FDCSPQ8NFU4 85 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 ZNF430Q9H8G1 570 aaPredicted RBP12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 MIOXQ9UGB7 285 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 ISLRO14498 428 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 GNG7O60262 68 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 PAFAH1B2P68402 229 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 RIGQ13278 110 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 TMEM42Q69YG0 159 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 TMEM190Q8WZ59 177 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 NEURL1O76050 574 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 FAM157CP0CG43 387 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 ORM2P19652 201 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 CLEC12BQ2HXU8 276 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 C16orf82Q7Z2V1 217 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 OSR1Q8TAX0 266 aaPredicted RBP12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 PNRC2Q9NPJ4 139 aaKnown RBP12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 TCF19Q9Y242 345 aa12.58□□□□□ -0.4
AP000550.1-201ENST00000420508 A0A087WWC5 75 aa12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 B9A039 149 aa12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 HYPMO75409 117 aa12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 PMS2P11Q13670 270 aa12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 ACSF3Q4G176 576 aaPredicted RBP12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 RNF126Q9BV68 326 aa12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 SPTBP11277 2137 aa12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 TRBV6-6A0A0A6YYG2 114 aa12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 RBFOX2O43251 390 aaKnown RBP eCLIP12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 KBTBD11O94819 623 aa12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 S1PR2O95136 353 aa12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 CECR9P0C854 216 aa12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 KRTDAPP60985 99 aa12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 BMPERQ8N8U9 685 aa12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 OR4C13Q8NGP0 309 aa12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 PAXXQ9BUH6 204 aa12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 ASCL3Q9NQ33 180 aa12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 KCNAB3O43448 404 aa12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 GOSR1O95249 250 aa12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 CELA3AP09093 270 aa12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 RPL11P62913 178 aaKnown RBP12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 PACRGQ96M98 296 aaPredicted RBP12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 C12orf77C9JDV5 145 aa12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 HLA-DRB5Q30154 266 aa12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 FAM103A1Q9BTL3 118 aaKnown RBP12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 HIGD1AQ9Y241 93 aa12.57□□□□□ -0.4
AP000550.1-201ENST00000420508 SERTM2A0A1B0GWG4 89 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms