RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 SCTP09683 121 aa9.75□□□□□ -0.85
LINC00339-203ENST00000420503 CD3GP09693 182 aa9.75□□□□□ -0.85
LINC00339-203ENST00000420503 RBMY1DP0C7P1 496 aaKnown RBP9.75□□□□□ -0.85
LINC00339-203ENST00000420503 CPEP16870 476 aa9.75□□□□□ -0.85
LINC00339-203ENST00000420503 WNT4P56705 351 aa9.75□□□□□ -0.85
LINC00339-203ENST00000420503 RPS16P62249 146 aaKnown RBP9.75□□□□□ -0.85
LINC00339-203ENST00000420503 RPS27AP62979 156 aaKnown RBP9.75□□□□□ -0.85
LINC00339-203ENST00000420503 LRRTM1Q86UE6 522 aa9.75□□□□□ -0.85
LINC00339-203ENST00000420503 DEFB125Q8N687 156 aa9.75□□□□□ -0.85
LINC00339-203ENST00000420503 SLA2Q9H6Q3 261 aa9.75□□□□□ -0.85
LINC00339-203ENST00000420503 CHMP1AQ9HD42 196 aaPredicted RBP9.75□□□□□ -0.85
LINC00339-203ENST00000420503 CHCHD3Q9NX63 227 aaKnown RBP9.75□□□□□ -0.85
LINC00339-203ENST00000420503 STEAP1Q9UHE8 339 aa9.75□□□□□ -0.85
LINC00339-203ENST00000420503 AK3Q9UIJ7 227 aa9.75□□□□□ -0.85
LINC00339-203ENST00000420503 CEPT1Q9Y6K0 416 aa9.75□□□□□ -0.85
LINC00339-203ENST00000420503 MYL12BO14950 172 aa9.74□□□□□ -0.85
LINC00339-203ENST00000420503 SOCS1O15524 211 aa9.74□□□□□ -0.85
LINC00339-203ENST00000420503 PRH1P02810 166 aa9.74□□□□□ -0.85
LINC00339-203ENST00000420503 CELP19835 753 aa9.74□□□□□ -0.85
LINC00339-203ENST00000420503 ZP3P21754 424 aa9.74□□□□□ -0.85
LINC00339-203ENST00000420503 CEACAM6P40199 344 aa9.74□□□□□ -0.85
LINC00339-203ENST00000420503 NEDD4LQ96PU5 975 aa9.74□□□□□ -0.85
LINC00339-203ENST00000420503 Q9H521 79 aa9.74□□□□□ -0.85
LINC00339-203ENST00000420503 ABRACLQ9P1F3 81 aa9.74□□□□□ -0.85
LINC00339-203ENST00000420503 HERC2O95714 4834 aa9.73□□□□□ -0.85
LINC00339-203ENST00000420503 SLC22A1O15245 554 aa9.73□□□□□ -0.85
LINC00339-203ENST00000420503 RGS10O43665 173 aa9.73□□□□□ -0.85
LINC00339-203ENST00000420503 RBBP9O75884 186 aa9.73□□□□□ -0.85
LINC00339-203ENST00000420503 IFNA6P05013 189 aa9.73□□□□□ -0.85
LINC00339-203ENST00000420503 CRYGBP07316 175 aa9.73□□□□□ -0.85
LINC00339-203ENST00000420503 MC5RP33032 325 aa9.73□□□□□ -0.85
LINC00339-203ENST00000420503 MECP2P51608 486 aaKnown RBP9.73□□□□□ -0.85
LINC00339-203ENST00000420503 CD81P60033 236 aa9.73□□□□□ -0.85
LINC00339-203ENST00000420503 QRFPP83859 136 aa9.73□□□□□ -0.85
LINC00339-203ENST00000420503 CD300EQ496F6 205 aaPredicted RBP9.73□□□□□ -0.85
LINC00339-203ENST00000420503 PRSS48Q7RTY5 328 aa9.73□□□□□ -0.85
LINC00339-203ENST00000420503 BVESQ8NE79 360 aa9.73□□□□□ -0.85
LINC00339-203ENST00000420503 MND1Q9BWT6 205 aa9.73□□□□□ -0.85
LINC00339-203ENST00000420503 TMEM59Q9BXS4 323 aa9.73□□□□□ -0.85
LINC00339-203ENST00000420503 SRRM4A7MD48 611 aaKnown RBP9.72□□□□□ -0.85
LINC00339-203ENST00000420503 H0Y980 276 aa9.72□□□□□ -0.85
LINC00339-203ENST00000420503 M0R1X1 148 aa9.72□□□□□ -0.85
LINC00339-203ENST00000420503 BMPR1BO00238 502 aa9.72□□□□□ -0.85
LINC00339-203ENST00000420503 CD1AP06126 327 aa9.72□□□□□ -0.85
LINC00339-203ENST00000420503 TAS2R43P59537 309 aa9.72□□□□□ -0.85
LINC00339-203ENST00000420503 GABARAPL2P60520 117 aa9.72□□□□□ -0.85
LINC00339-203ENST00000420503 HLA-DRB3P79483 266 aa9.72□□□□□ -0.85
LINC00339-203ENST00000420503 PLA2G7Q13093 441 aa9.72□□□□□ -0.85
LINC00339-203ENST00000420503 P2RY14Q15391 338 aa9.72□□□□□ -0.85
LINC00339-203ENST00000420503 ZNF343Q6P1L6 599 aa9.72□□□□□ -0.85
LINC00339-203ENST00000420503 C19orf35Q6ZS72 473 aa9.72□□□□□ -0.85
LINC00339-203ENST00000420503 GTSCR1Q86UQ5 136 aa9.72□□□□□ -0.85
LINC00339-203ENST00000420503 CDH26Q8IXH8 852 aa9.72□□□□□ -0.85
LINC00339-203ENST00000420503 NKAIN3Q8N8D7 197 aa9.72□□□□□ -0.85
LINC00339-203ENST00000420503 GFI1Q99684 422 aa9.72□□□□□ -0.85
LINC00339-203ENST00000420503 UQCC2Q9BRT2 126 aa9.72□□□□□ -0.85
LINC00339-203ENST00000420503 TM2D1Q9BX74 207 aa9.72□□□□□ -0.85
LINC00339-203ENST00000420503 TINAGL1Q9GZM7 467 aaPredicted RBP9.72□□□□□ -0.85
LINC00339-203ENST00000420503 COA4Q9NYJ1 87 aa9.72□□□□□ -0.85
LINC00339-203ENST00000420503 PEF1Q9UBV8 284 aaKnown RBP9.72□□□□□ -0.85
LINC00339-203ENST00000420503 BLOC1S6Q9UL45 172 aa9.72□□□□□ -0.85
LINC00339-203ENST00000420503 ZNF785A8K8V0 405 aa9.71□□□□□ -0.86
LINC00339-203ENST00000420503 TMEM14DPA8MWL7 114 aa9.71□□□□□ -0.86
LINC00339-203ENST00000420503 CNIH1O95406 144 aa9.71□□□□□ -0.86
LINC00339-203ENST00000420503 HLA-AP01891 365 aaKnown RBP9.71□□□□□ -0.86
LINC00339-203ENST00000420503 CD40LGP29965 261 aa9.71□□□□□ -0.86
LINC00339-203ENST00000420503 EWSR1Q01844 656 aaKnown RBP eCLIP9.71□□□□□ -0.86
LINC00339-203ENST00000420503 ZNF45Q02386 682 aa9.71□□□□□ -0.86
LINC00339-203ENST00000420503 SPHARQ15513 63 aa9.71□□□□□ -0.86
LINC00339-203ENST00000420503 TBCEQ15813 527 aaPredicted RBP9.71□□□□□ -0.86
LINC00339-203ENST00000420503 C1orf100Q5SVJ3 147 aa9.71□□□□□ -0.86
LINC00339-203ENST00000420503 LCN12Q6JVE5 192 aa9.71□□□□□ -0.86
LINC00339-203ENST00000420503 IDO2Q6ZQW0 420 aa9.71□□□□□ -0.86
LINC00339-203ENST00000420503 TSNAXQ99598 290 aaKnown RBP9.71□□□□□ -0.86
LINC00339-203ENST00000420503 NEURL2Q9BR09 285 aa9.71□□□□□ -0.86
LINC00339-203ENST00000420503 YTHDF1Q9BYJ9 559 aaKnown RBP9.71□□□□□ -0.86
LINC00339-203ENST00000420503 LPAR5Q9H1C0 372 aa9.71□□□□□ -0.86
LINC00339-203ENST00000420503 Q9N2K0 584 aa9.71□□□□□ -0.86
LINC00339-203ENST00000420503 SLC35D1Q9NTN3 355 aa9.71□□□□□ -0.86
LINC00339-203ENST00000420503 LRRC42Q9Y546 428 aa9.71□□□□□ -0.86
LINC00339-203ENST00000420503 SHISA3A0PJX4 238 aa9.7□□□□□ -0.86
LINC00339-203ENST00000420503 FOXI3A8MTJ6 420 aaPredicted RBP9.7□□□□□ -0.86
LINC00339-203ENST00000420503 H3BUA1 57 aa9.7□□□□□ -0.86
LINC00339-203ENST00000420503 MRPS14O60783 128 aaKnown RBP9.7□□□□□ -0.86
LINC00339-203ENST00000420503 SPDEFO95238 335 aa9.7□□□□□ -0.86
LINC00339-203ENST00000420503 TAGLNQ01995 201 aaKnown RBP9.7□□□□□ -0.86
LINC00339-203ENST00000420503 MED22Q15528 200 aa9.7□□□□□ -0.86
LINC00339-203ENST00000420503 RPEL1Q2QD12 228 aa9.7□□□□□ -0.86
LINC00339-203ENST00000420503 ACSM3Q53FZ2 586 aa9.7□□□□□ -0.86
LINC00339-203ENST00000420503 C10orf55Q5SWW7 151 aa9.7□□□□□ -0.86
LINC00339-203ENST00000420503 PDPNQ86YL7 162 aa9.7□□□□□ -0.86
LINC00339-203ENST00000420503 Q8N402 240 aa9.7□□□□□ -0.86
LINC00339-203ENST00000420503 ADAD2Q8NCV1 583 aaKnown RBP9.7□□□□□ -0.86
LINC00339-203ENST00000420503 CACNG8Q8WXS5 425 aa9.7□□□□□ -0.86
LINC00339-203ENST00000420503 LINC00476Q8WZB0 136 aa9.7□□□□□ -0.86
LINC00339-203ENST00000420503 WDR89Q96FK6 387 aaPredicted RBP9.7□□□□□ -0.86
LINC00339-203ENST00000420503 RNF5Q99942 180 aa9.7□□□□□ -0.86
LINC00339-203ENST00000420503 SRD5A3Q9H8P0 318 aa9.7□□□□□ -0.86
LINC00339-203ENST00000420503 PLEKHJ1Q9NW61 149 aa9.7□□□□□ -0.86
LINC00339-203ENST00000420503 RDH8Q9NYR8 311 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms