RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 HEPN1Q6WQI6 88 aa17.21■□□□□ 0.35
GPC1-202ENST00000420138 LSM10Q969L4 123 aaKnown RBP17.21■□□□□ 0.35
GPC1-202ENST00000420138 HSD17B10Q99714 261 aaKnown RBP17.21■□□□□ 0.35
GPC1-202ENST00000420138 SPIN2AQ99865 258 aa17.21■□□□□ 0.35
GPC1-202ENST00000420138 SPIN2BQ9BPZ2 258 aa17.21■□□□□ 0.35
GPC1-202ENST00000420138 ZNF251Q9BRH9 671 aa17.21■□□□□ 0.35
GPC1-202ENST00000420138 C11orf1Q9H5F2 150 aa17.21■□□□□ 0.35
GPC1-202ENST00000420138 LPAR3Q9UBY5 353 aa17.21■□□□□ 0.35
GPC1-202ENST00000420138 NDUFS7O75251 213 aa17.21■□□□□ 0.35
GPC1-202ENST00000420138 LPAR6P43657 344 aa17.21■□□□□ 0.35
GPC1-202ENST00000420138 RAB7AP51149 207 aa17.21■□□□□ 0.35
GPC1-202ENST00000420138 CATR1Q13166 79 aa17.21■□□□□ 0.35
GPC1-202ENST00000420138 IZUMO4Q1ZYL8 232 aa17.21■□□□□ 0.35
GPC1-202ENST00000420138 TMEM155Q4W5P6 130 aa17.21■□□□□ 0.35
GPC1-202ENST00000420138 OR2B11Q5JQS5 317 aa17.21■□□□□ 0.35
GPC1-202ENST00000420138 NCR3LG1Q68D85 454 aa17.21■□□□□ 0.35
GPC1-202ENST00000420138 DMBX1Q8NFW5 382 aa17.21■□□□□ 0.35
GPC1-202ENST00000420138 RNF141Q8WVD5 230 aa17.21■□□□□ 0.35
GPC1-202ENST00000420138 TCTEX1D2Q8WW35 142 aa17.21■□□□□ 0.35
GPC1-202ENST00000420138 FAM212BQ9NTI7 297 aaPredicted RBP17.21■□□□□ 0.35
GPC1-202ENST00000420138 RCL1Q9Y2P8 373 aaKnown RBP17.21■□□□□ 0.35
GPC1-202ENST00000420138 POMT1Q9Y6A1 747 aa17.21■□□□□ 0.35
GPC1-202ENST00000420138 SLC25A6P12236 298 aa17.2■□□□□ 0.34
GPC1-202ENST00000420138 CXorf66Q5JRM2 361 aaPredicted RBP17.2■□□□□ 0.34
GPC1-202ENST00000420138 RPL7L1Q6DKI1 246 aaKnown RBP17.2■□□□□ 0.34
GPC1-202ENST00000420138 SPAG16Q8N0X2 631 aa17.2■□□□□ 0.34
GPC1-202ENST00000420138 C11orf42Q8N5U0 333 aa17.2■□□□□ 0.34
GPC1-202ENST00000420138 TMED6Q8WW62 240 aa17.2■□□□□ 0.34
GPC1-202ENST00000420138 LINC00052Q96N35 136 aa17.2■□□□□ 0.34
GPC1-202ENST00000420138 PIGBOS1A0A0B4J2F0 54 aa17.19■□□□□ 0.34
GPC1-202ENST00000420138 KIAA1324LA8MWY0 1029 aaPredicted RBP17.19■□□□□ 0.34
GPC1-202ENST00000420138 GAPDHP04406 335 aaKnown RBP17.19■□□□□ 0.34
GPC1-202ENST00000420138 P2RY1P47900 373 aa17.19■□□□□ 0.34
GPC1-202ENST00000420138 ID3Q02535 119 aa17.19■□□□□ 0.34
GPC1-202ENST00000420138 GPR157Q5UAW9 335 aa17.19■□□□□ 0.34
GPC1-202ENST00000420138 EIF5AL1Q6IS14 154 aaKnown RBP17.19■□□□□ 0.34
GPC1-202ENST00000420138 SLC25A48Q6ZT89 311 aaKnown RBP17.19■□□□□ 0.34
GPC1-202ENST00000420138 TCTEX1D1Q8N7M0 179 aa17.19■□□□□ 0.34
GPC1-202ENST00000420138 FBXL17Q9UF56 701 aa17.19■□□□□ 0.34
GPC1-202ENST00000420138 ARID1AO14497 2285 aa17.19■□□□□ 0.34
GPC1-202ENST00000420138 SAA2-SAA4A0A096LPE2 208 aa17.19■□□□□ 0.34
GPC1-202ENST00000420138 A0A1B0GU03 582 aa17.19■□□□□ 0.34
GPC1-202ENST00000420138 GPR137BO60478 399 aa17.19■□□□□ 0.34
GPC1-202ENST00000420138 P0C879 139 aa17.19■□□□□ 0.34
GPC1-202ENST00000420138 SAA2P0DJI9 122 aaPredicted RBP17.19■□□□□ 0.34
GPC1-202ENST00000420138 TMEM33P57088 247 aa17.19■□□□□ 0.34
GPC1-202ENST00000420138 CHODLQ9H9P2 273 aa17.19■□□□□ 0.34
GPC1-202ENST00000420138 ZNRD1Q9P1U0 126 aa17.19■□□□□ 0.34
GPC1-202ENST00000420138 NUP50Q9UKX7 468 aa17.19■□□□□ 0.34
GPC1-202ENST00000420138 SPTAN1Q13813 2472 aaKnown RBP17.19■□□□□ 0.34
GPC1-202ENST00000420138 TRBV23-1A0A0A0MS06 115 aa17.18■□□□□ 0.34
GPC1-202ENST00000420138 M0R1X1 148 aa17.18■□□□□ 0.34
GPC1-202ENST00000420138 JTBO76095 146 aa17.18■□□□□ 0.34
GPC1-202ENST00000420138 S1PR2O95136 353 aa17.18■□□□□ 0.34
GPC1-202ENST00000420138 CRYZL1O95825 349 aa17.18■□□□□ 0.34
GPC1-202ENST00000420138 COX6B1P14854 86 aa17.18■□□□□ 0.34
GPC1-202ENST00000420138 GNG10P50151 68 aa17.18■□□□□ 0.34
GPC1-202ENST00000420138 TLE4Q04727 773 aa17.18■□□□□ 0.34
GPC1-202ENST00000420138 ZNF816Q0VGE8 651 aaPredicted RBP17.18■□□□□ 0.34
GPC1-202ENST00000420138 PPIHO43447 177 aaKnown RBP17.17■□□□□ 0.34
GPC1-202ENST00000420138 F12P00748 615 aaPredicted RBP17.17■□□□□ 0.34
GPC1-202ENST00000420138 FAM157CP0CG43 387 aa17.17■□□□□ 0.34
GPC1-202ENST00000420138 NKX2-1P43699 371 aaPredicted RBP17.17■□□□□ 0.34
GPC1-202ENST00000420138 POLR2GP62487 172 aaKnown RBP eCLIP17.17■□□□□ 0.34
GPC1-202ENST00000420138 SP5Q6BEB4 398 aaPredicted RBP17.17■□□□□ 0.34
GPC1-202ENST00000420138 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.17■□□□□ 0.34
GPC1-202ENST00000420138 IGFBPL1Q8WX77 278 aa17.17■□□□□ 0.34
GPC1-202ENST00000420138 DDB2Q92466 427 aa17.17■□□□□ 0.34
GPC1-202ENST00000420138 RAB1CQ92928 201 aa17.17■□□□□ 0.34
GPC1-202ENST00000420138 UTP20O75691 2785 aaKnown RBP17.17■□□□□ 0.34
GPC1-202ENST00000420138 OVOL3O00110 214 aa17.17■□□□□ 0.34
GPC1-202ENST00000420138 RAB29O14966 203 aa17.17■□□□□ 0.34
GPC1-202ENST00000420138 EPHA1P21709 976 aa17.17■□□□□ 0.34
GPC1-202ENST00000420138 OR1S2Q8NGQ3 325 aa17.17■□□□□ 0.34
GPC1-202ENST00000420138 NARFLQ9H6Q4 476 aa17.17■□□□□ 0.34
GPC1-202ENST00000420138 CACNG5Q9UF02 275 aa17.17■□□□□ 0.34
GPC1-202ENST00000420138 AKR1C2P52895 323 aa17.16■□□□□ 0.34
GPC1-202ENST00000420138 WDR25Q64LD2 544 aaPredicted RBP17.16■□□□□ 0.34
GPC1-202ENST00000420138 LYG1Q8N1E2 194 aa17.16■□□□□ 0.34
GPC1-202ENST00000420138 MARC2Q969Z3 335 aa17.16■□□□□ 0.34
GPC1-202ENST00000420138 MIOXQ9UGB7 285 aa17.16■□□□□ 0.34
GPC1-202ENST00000420138 MMP24Q9Y5R2 645 aa17.16■□□□□ 0.34
GPC1-202ENST00000420138 GPR37O15354 613 aa17.15■□□□□ 0.34
GPC1-202ENST00000420138 G6PCP35575 357 aa17.15■□□□□ 0.34
GPC1-202ENST00000420138 NEIL1Q96FI4 390 aaPredicted RBP17.15■□□□□ 0.34
GPC1-202ENST00000420138 TIMD4Q96H15 378 aa17.15■□□□□ 0.34
GPC1-202ENST00000420138 SMIM3Q9BZL3 60 aa17.15■□□□□ 0.34
GPC1-202ENST00000420138 MAGT1Q9H0U3 335 aa17.15■□□□□ 0.34
GPC1-202ENST00000420138 A0A087X0M5 115 aa17.14■□□□□ 0.34
GPC1-202ENST00000420138 A0A1B0GX30 115 aa17.14■□□□□ 0.34
GPC1-202ENST00000420138 RAB19A4D1S5 217 aa17.14■□□□□ 0.34
GPC1-202ENST00000420138 TMEM50AO95807 157 aa17.14■□□□□ 0.34
GPC1-202ENST00000420138 KRASP01116 189 aa17.14■□□□□ 0.34
GPC1-202ENST00000420138 PVALBP20472 110 aaPredicted RBP17.14■□□□□ 0.34
GPC1-202ENST00000420138 EFNA4P52798 201 aa17.14■□□□□ 0.34
GPC1-202ENST00000420138 TUSC1Q2TAM9 212 aa17.14■□□□□ 0.34
GPC1-202ENST00000420138 UBAC2Q8NBM4 344 aa17.14■□□□□ 0.34
GPC1-202ENST00000420138 OR8B3Q8NGG8 313 aa17.14■□□□□ 0.34
GPC1-202ENST00000420138 C8orf46Q8TAG6 207 aa17.14■□□□□ 0.34
GPC1-202ENST00000420138 ZNF596Q8TC21 504 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms