RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 GHRLQ9UBU3 117 aa10.72□□□□□ -0.69
NFE4-201ENST00000420058 EXOSC1Q9Y3B2 195 aaKnown RBP10.72□□□□□ -0.69
NFE4-201ENST00000420058 BMPR1BO00238 502 aa10.71□□□□□ -0.69
NFE4-201ENST00000420058 OR2A4O95047 310 aa10.71□□□□□ -0.69
NFE4-201ENST00000420058 SCTP09683 121 aa10.71□□□□□ -0.69
NFE4-201ENST00000420058 EDN2P20800 178 aa10.71□□□□□ -0.69
NFE4-201ENST00000420058 AADACP22760 399 aa10.71□□□□□ -0.69
NFE4-201ENST00000420058 INSL4Q14641 139 aa10.71□□□□□ -0.69
NFE4-201ENST00000420058 DEFB114Q30KQ6 69 aa10.71□□□□□ -0.69
NFE4-201ENST00000420058 PDPNQ86YL7 162 aa10.71□□□□□ -0.69
NFE4-201ENST00000420058 USMG5Q96IX5 58 aa10.71□□□□□ -0.69
NFE4-201ENST00000420058 TMEM68Q96MH6 324 aa10.71□□□□□ -0.69
NFE4-201ENST00000420058 DMRT1Q9Y5R6 373 aa10.71□□□□□ -0.69
NFE4-201ENST00000420058 PNMA8CA0A1B0GUJ8 204 aa10.7□□□□□ -0.7
NFE4-201ENST00000420058 DYNC1I1O14576 645 aa10.7□□□□□ -0.7
NFE4-201ENST00000420058 CIB2O75838 187 aa10.7□□□□□ -0.7
NFE4-201ENST00000420058 ATP5HO75947 161 aa10.7□□□□□ -0.7
NFE4-201ENST00000420058 CNIH1O95406 144 aa10.7□□□□□ -0.7
NFE4-201ENST00000420058 TATDN3Q17R31 274 aa10.7□□□□□ -0.7
NFE4-201ENST00000420058 RPEL1Q2QD12 228 aa10.7□□□□□ -0.7
NFE4-201ENST00000420058 C1orf100Q5SVJ3 147 aa10.7□□□□□ -0.7
NFE4-201ENST00000420058 LRRTM1Q86UE6 522 aa10.7□□□□□ -0.7
NFE4-201ENST00000420058 NKAIN3Q8N8D7 197 aa10.7□□□□□ -0.7
NFE4-201ENST00000420058 ADAD2Q8NCV1 583 aaKnown RBP10.7□□□□□ -0.7
NFE4-201ENST00000420058 GGHQ92820 318 aa10.7□□□□□ -0.7
NFE4-201ENST00000420058 C5orf30Q96GV9 206 aa10.7□□□□□ -0.7
NFE4-201ENST00000420058 TMEM80Q96HE8 168 aa10.7□□□□□ -0.7
NFE4-201ENST00000420058 FOXI3A8MTJ6 420 aaPredicted RBP10.69□□□□□ -0.7
NFE4-201ENST00000420058 TMEM14DPA8MWL7 114 aa10.69□□□□□ -0.7
NFE4-201ENST00000420058 OR11H12B2RN74 326 aa10.69□□□□□ -0.7
NFE4-201ENST00000420058 TPPPO94811 219 aa10.69□□□□□ -0.7
NFE4-201ENST00000420058 CD1AP06126 327 aa10.69□□□□□ -0.7
NFE4-201ENST00000420058 APELAP0DMC3 54 aa10.69□□□□□ -0.7
NFE4-201ENST00000420058 ZBTB25P24278 435 aa10.69□□□□□ -0.7
NFE4-201ENST00000420058 LGALS7P47929 136 aa10.69□□□□□ -0.7
NFE4-201ENST00000420058 EWSR1Q01844 656 aaKnown RBP eCLIP10.69□□□□□ -0.7
NFE4-201ENST00000420058 LAX1Q8IWV1 398 aa10.69□□□□□ -0.7
NFE4-201ENST00000420058 SETD6Q8TBK2 473 aa10.69□□□□□ -0.7
NFE4-201ENST00000420058 EDARADDQ8WWZ3 215 aa10.69□□□□□ -0.7
NFE4-201ENST00000420058 SNAPC3Q92966 411 aa10.69□□□□□ -0.7
NFE4-201ENST00000420058 OVOL2Q9BRP0 275 aa10.69□□□□□ -0.7
NFE4-201ENST00000420058 C9orf16Q9BUW7 83 aa10.69□□□□□ -0.7
NFE4-201ENST00000420058 SRD5A3Q9H8P0 318 aa10.69□□□□□ -0.7
NFE4-201ENST00000420058 ZC4H2Q9NQZ6 224 aa10.69□□□□□ -0.7
NFE4-201ENST00000420058 ZNF230Q9UIE0 474 aaPredicted RBP10.69□□□□□ -0.7
NFE4-201ENST00000420058 AK3Q9UIJ7 227 aa10.69□□□□□ -0.7
NFE4-201ENST00000420058 TRBV9A0A0B4J1U6 114 aa10.68□□□□□ -0.7
NFE4-201ENST00000420058 MSGN1A6NI15 193 aa10.68□□□□□ -0.7
NFE4-201ENST00000420058 SOCS1O15524 211 aa10.68□□□□□ -0.7
NFE4-201ENST00000420058 LY6G6CO95867 125 aa10.68□□□□□ -0.7
NFE4-201ENST00000420058 UBBP0CG47 229 aa10.68□□□□□ -0.7
NFE4-201ENST00000420058 MYL12AP19105 171 aa10.68□□□□□ -0.7
NFE4-201ENST00000420058 CELP19835 753 aa10.68□□□□□ -0.7
NFE4-201ENST00000420058 KIR2DS2P43631 304 aa10.68□□□□□ -0.7
NFE4-201ENST00000420058 TMEM50BP56557 158 aa10.68□□□□□ -0.7
NFE4-201ENST00000420058 ZNF45Q02386 682 aa10.68□□□□□ -0.7
NFE4-201ENST00000420058 LAIR2Q6ISS4 152 aa10.68□□□□□ -0.7
NFE4-201ENST00000420058 ZFP1Q6P2D0 407 aa10.68□□□□□ -0.7
NFE4-201ENST00000420058 MOB1BQ7L9L4 216 aa10.68□□□□□ -0.7
NFE4-201ENST00000420058 FAM89BQ8N5H3 189 aa10.68□□□□□ -0.7
NFE4-201ENST00000420058 TMEM59Q9BXS4 323 aa10.68□□□□□ -0.7
NFE4-201ENST00000420058 LPAR5Q9H1C0 372 aa10.68□□□□□ -0.7
NFE4-201ENST00000420058 RIMS4Q9H426 269 aaPredicted RBP10.68□□□□□ -0.7
NFE4-201ENST00000420058 CHMP1AQ9HD42 196 aaPredicted RBP10.68□□□□□ -0.7
NFE4-201ENST00000420058 Q9N2K0 584 aa10.68□□□□□ -0.7
NFE4-201ENST00000420058 AKIP1Q9NQ31 210 aa10.68□□□□□ -0.7
NFE4-201ENST00000420058 SLC35D1Q9NTN3 355 aa10.68□□□□□ -0.7
NFE4-201ENST00000420058 COA4Q9NYJ1 87 aa10.68□□□□□ -0.7
NFE4-201ENST00000420058 DNAH6Q9C0G6 4158 aa10.67□□□□□ -0.7
NFE4-201ENST00000420058 IRGMA1A4Y4 181 aa10.67□□□□□ -0.7
NFE4-201ENST00000420058 M0R1X1 148 aa10.67□□□□□ -0.7
NFE4-201ENST00000420058 AIREO43918 545 aa10.67□□□□□ -0.7
NFE4-201ENST00000420058 PRH1P02810 166 aa10.67□□□□□ -0.7
NFE4-201ENST00000420058 HLA-DRB3P79483 266 aa10.67□□□□□ -0.7
NFE4-201ENST00000420058 ST3GAL4Q11206 333 aa10.67□□□□□ -0.7
NFE4-201ENST00000420058 TMEM177Q53S58 311 aa10.67□□□□□ -0.7
NFE4-201ENST00000420058 KCNG3Q8TAE7 436 aa10.67□□□□□ -0.7
NFE4-201ENST00000420058 WDR89Q96FK6 387 aaPredicted RBP10.67□□□□□ -0.7
NFE4-201ENST00000420058 PLEKHJ1Q9NW61 149 aa10.67□□□□□ -0.7
NFE4-201ENST00000420058 SLC2A8Q9NY64 477 aa10.67□□□□□ -0.7
NFE4-201ENST00000420058 RDH8Q9NYR8 311 aa10.67□□□□□ -0.7
NFE4-201ENST00000420058 PEMTQ9UBM1 199 aa10.67□□□□□ -0.7
NFE4-201ENST00000420058 ZNF221Q9UK13 617 aa10.67□□□□□ -0.7
NFE4-201ENST00000420058 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.66□□□□□ -0.7
NFE4-201ENST00000420058 C2orf70A6NJV1 201 aa10.66□□□□□ -0.7
NFE4-201ENST00000420058 APOA2P02652 100 aa10.66□□□□□ -0.7
NFE4-201ENST00000420058 CD3GP09693 182 aa10.66□□□□□ -0.7
NFE4-201ENST00000420058 OR9G9P0C7N8 305 aa10.66□□□□□ -0.7
NFE4-201ENST00000420058 FOLR2P14207 255 aa10.66□□□□□ -0.7
NFE4-201ENST00000420058 RHOGP84095 191 aa10.66□□□□□ -0.7
NFE4-201ENST00000420058 RPP25LQ8N5L8 163 aaKnown RBP10.66□□□□□ -0.7
NFE4-201ENST00000420058 ST6GALNAC5Q9BVH7 336 aa10.66□□□□□ -0.7
NFE4-201ENST00000420058 SELENOKQ9Y6D0 94 aa10.66□□□□□ -0.7
NFE4-201ENST00000420058 EFCAB10A6NFE3 127 aa10.65□□□□□ -0.7
NFE4-201ENST00000420058 TAS2R43P59537 309 aa10.65□□□□□ -0.7
NFE4-201ENST00000420058 PRSS8Q16651 343 aa10.65□□□□□ -0.7
NFE4-201ENST00000420058 ACSM3Q53FZ2 586 aa10.65□□□□□ -0.7
NFE4-201ENST00000420058 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.65□□□□□ -0.7
NFE4-201ENST00000420058 SDHAF2Q9NX18 166 aa10.65□□□□□ -0.7
NFE4-201ENST00000420058 DNAH17Q9UFH2 4485 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms