RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 RAB3BP20337 219 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 PPP1CCP36873 323 aaKnown RBP5.48□□□□□ -1.53
HMGN1-205ENST00000419378 VEGFCP49767 419 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 PSMD7P51665 324 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 HTD2P86397 168 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 PLA2G7Q13093 441 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 HES1Q14469 280 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 C2orf76Q3KRA6 126 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 KCTD21Q4G0X4 260 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 ABCA11PQ4W5N1 156 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 MORN2Q502X0 79 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 ZNF880Q6PDB4 577 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 MOB1BQ7L9L4 216 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 NR2C2APQ86WQ0 139 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 LYG1Q8N1E2 194 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 C5orf56Q8N8D9 126 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 SETD6Q8TBK2 473 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 GALMQ96C23 342 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 ARHGAP5-AS1Q96IT6 56 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 C12orf4Q9NQ89 552 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 TXNL4BQ9NX01 149 aaKnown RBP5.48□□□□□ -1.53
HMGN1-205ENST00000419378 ABRACLQ9P1F3 81 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 AK3Q9UIJ7 227 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 STUB1Q9UNE7 303 aa5.48□□□□□ -1.53
HMGN1-205ENST00000419378 A0A0B4J203 849 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 SMIM30A4D0T7 59 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 LINC01548A6NM66 108 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 ZNF736B4DX44 427 aaPredicted RBP5.47□□□□□ -1.53
HMGN1-205ENST00000419378 FGF16O43320 207 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 YPEL1O60688 119 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 RGS11O94810 467 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 CD1BP29016 333 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 FGF9P31371 208 aaPredicted RBP5.47□□□□□ -1.53
HMGN1-205ENST00000419378 RANBP1P43487 201 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 TMEM50BP56557 158 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 HLA-DRB3P79483 266 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 EBI3Q14213 229 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 HNF4GQ14541 408 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 NEDD8Q15843 81 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 MOGAT2Q3SYC2 334 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 C9orf152Q5JTZ5 239 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 LY6G6FQ5SQ64 297 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 LCE5AQ5TCM9 118 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 TGIF2LXQ8IUE1 241 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 Q8N6K4 173 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 OR56B1Q8NGI3 324 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 OR2T10Q8NGZ9 312 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 OSR1Q8TAX0 266 aaPredicted RBP5.47□□□□□ -1.53
HMGN1-205ENST00000419378 IL1F10Q8WWZ1 152 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 YPEL2Q96QA6 119 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 CITED2Q99967 270 aaPredicted RBP5.47□□□□□ -1.53
HMGN1-205ENST00000419378 PECRQ9BY49 303 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 IFI27L2Q9H2X8 130 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 RIMS4Q9H426 269 aaPredicted RBP5.47□□□□□ -1.53
HMGN1-205ENST00000419378 RAB22AQ9UL26 194 aa5.47□□□□□ -1.53
HMGN1-205ENST00000419378 MFNGO00587 321 aa5.46□□□□□ -1.54
HMGN1-205ENST00000419378 LANCL1O43813 399 aa5.46□□□□□ -1.54
HMGN1-205ENST00000419378 SLC2A2P11168 524 aaPredicted RBP5.46□□□□□ -1.54
HMGN1-205ENST00000419378 OR3A3P47888 321 aa5.46□□□□□ -1.54
HMGN1-205ENST00000419378 ZNF833PQ6ZTB9 187 aa5.46□□□□□ -1.54
HMGN1-205ENST00000419378 CENPVQ7Z7K6 275 aaPredicted RBP5.46□□□□□ -1.54
HMGN1-205ENST00000419378 TPRA1Q86W33 373 aa5.46□□□□□ -1.54
HMGN1-205ENST00000419378 NDUFA11Q86Y39 141 aa5.46□□□□□ -1.54
HMGN1-205ENST00000419378 ODF3L1Q8IXM7 274 aa5.46□□□□□ -1.54
HMGN1-205ENST00000419378 OR2AK2Q8NG84 335 aa5.46□□□□□ -1.54
HMGN1-205ENST00000419378 OR5AU1Q8NGC0 362 aa5.46□□□□□ -1.54
HMGN1-205ENST00000419378 PTX4Q96A99 478 aa5.46□□□□□ -1.54
HMGN1-205ENST00000419378 RAB3CQ96E17 227 aa5.46□□□□□ -1.54
HMGN1-205ENST00000419378 RBMXL1Q96E39 390 aaKnown RBP5.46□□□□□ -1.54
HMGN1-205ENST00000419378 RNF125Q96EQ8 232 aa5.46□□□□□ -1.54
HMGN1-205ENST00000419378 CMSS1Q9BQ75 279 aaKnown RBP5.46□□□□□ -1.54
HMGN1-205ENST00000419378 CHCHD6Q9BRQ6 235 aa5.46□□□□□ -1.54
HMGN1-205ENST00000419378 MRPL20Q9BYC9 149 aaKnown RBP5.46□□□□□ -1.54
HMGN1-205ENST00000419378 PARP12Q9H0J9 701 aaKnown RBP5.46□□□□□ -1.54
HMGN1-205ENST00000419378 OR51E2Q9H255 320 aa5.46□□□□□ -1.54
HMGN1-205ENST00000419378 TMPRSS5Q9H3S3 457 aa5.46□□□□□ -1.54
HMGN1-205ENST00000419378 Q9N2K0 584 aa5.46□□□□□ -1.54
HMGN1-205ENST00000419378 MGAT4AQ9UM21 535 aa5.46□□□□□ -1.54
HMGN1-205ENST00000419378 SSR3Q9UNL2 185 aa5.46□□□□□ -1.54
HMGN1-205ENST00000419378 KCNK7Q9Y2U2 307 aa5.46□□□□□ -1.54
HMGN1-205ENST00000419378 A0A075B6Q4 140 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 SAA2-SAA4A0A096LPE2 208 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 IGKV1-6A0A0C4DH72 117 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 LOC100506127A0A0U1RQW1 187 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 NCBP2LA6PVI3 153 aaKnown RBP5.45□□□□□ -1.54
HMGN1-205ENST00000419378 SERPINE3A8MV23 424 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 TRDCB7Z8K6 153 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 MOSP00540 346 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 FCGR3AP08637 254 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 SCTP09683 121 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 CD3GP09693 182 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 SAA2P0DJI9 122 aaPredicted RBP5.45□□□□□ -1.54
HMGN1-205ENST00000419378 HIST1H1DP16402 221 aaKnown RBP5.45□□□□□ -1.54
HMGN1-205ENST00000419378 GNB3P16520 340 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 CD36P16671 472 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 ZBTB25P24278 435 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 GADD45AP24522 165 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 SDC2P34741 201 aa5.45□□□□□ -1.54
HMGN1-205ENST00000419378 MRPS15P82914 257 aaKnown RBP5.45□□□□□ -1.54
HMGN1-205ENST00000419378 NSUN5P1Q3KNT7 163 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms