RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 GLRA1P23415 457 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 FKBP2P26885 142 aaKnown RBP2.09□□□□□ -2.07
VPS41-206ENST00000418457 IL12BP29460 328 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 HOXA6P31267 233 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 AKT2P31751 481 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 ID1P41134 155 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 RPS27P42677 84 aaKnown RBP2.09□□□□□ -2.07
VPS41-206ENST00000418457 TNFRSF4P43489 277 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 NOVA1P51513 510 aaKnown RBP2.09□□□□□ -2.07
VPS41-206ENST00000418457 UBE2KP61086 200 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 LCN6P62502 163 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 GRB2P62993 217 aaKnown RBP2.09□□□□□ -2.07
VPS41-206ENST00000418457 HLA-DRB3P79483 266 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 RIGQ13278 110 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 ARFRP1Q13795 201 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 JOSD1Q15040 202 aaPredicted RBP2.09□□□□□ -2.07
VPS41-206ENST00000418457 ELOBQ15370 118 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 OR8B8Q15620 311 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 CD226Q15762 336 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 TAF9Q16594 264 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 HAGHQ16775 308 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 AARDQ4LEZ3 155 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 HIGD2BQ4VC39 106 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 ABCA11PQ4W5N1 156 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 TCEAL5Q5H9L2 206 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 PYY3Q5JQD4 70 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 COA6Q5JTJ3 125 aaKnown RBP2.09□□□□□ -2.07
VPS41-206ENST00000418457 THEM4Q5T1C6 240 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 NCMAPQ5T1S8 102 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 C9orf66Q5T8R8 295 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 C1orf189Q5VU69 101 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 AADACL3Q5VUY0 350 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 OR2T2Q6IF00 324 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 OR2A2Q6IF42 318 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 CBLN3Q6UW01 205 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 FBXW12Q6X9E4 464 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 DGAT2L6Q6ZPD8 337 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 COX15Q7KZN9 410 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 SLC16A14Q7RTX9 510 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 PRSS41Q7RTY9 318 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 NUFIP2Q7Z417 695 aaKnown RBP2.09□□□□□ -2.07
VPS41-206ENST00000418457 ZNF429Q86V71 674 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 TGIF2LYQ8IUE0 185 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 TMEM183AQ8IXX5 376 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 HIST3H2BBQ8N257 126 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 ZNF283Q8N7M2 679 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 MRPL43Q8N983 215 aaKnown RBP2.09□□□□□ -2.07
VPS41-206ENST00000418457 CSNK1G2-AS1Q8NCQ2 148 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 OR5T3Q8NGG3 340 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 OR51A2Q8NGJ7 313 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 OR51T1Q8NGJ9 327 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 OR5L2Q8NGL0 311 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 OR10D4PQ8NGN7 298 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 OR13C9Q8NGT0 318 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 OR13G1Q8NGZ3 307 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 OR6X1Q8NH79 312 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 OR10G6Q8NH81 332 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 AKR7LQ8NHP1 331 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 BCL2L2Q92843 193 aaPredicted RBP2.09□□□□□ -2.07
VPS41-206ENST00000418457 MRPL24Q96A35 216 aaKnown RBP2.09□□□□□ -2.07
VPS41-206ENST00000418457 ISOC2Q96AB3 205 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 ELSPBP1Q96BH3 223 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 DDIT4LQ96D03 193 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 SLAMF6Q96DU3 332 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 ACY3Q96HD9 319 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 C14orf144Q96I85 54 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 ARHGAP5-AS1Q96IT6 56 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 FAM210BQ96KR6 192 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 FOXN4Q96NZ1 517 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 RAB40CQ96S21 281 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 GPER1Q99527 375 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 NRTNQ99748 197 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 NDUFAF3Q9BU61 184 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 SCRT1Q9BWW7 348 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 ANGPTL4Q9BY76 406 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 PBOV1Q9GZY1 135 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 CHRNA10Q9GZZ6 450 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 METTL9Q9H1A3 318 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 PRO3102Q9H379 93 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 LIME1Q9H400 295 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 NAA60Q9H7X0 242 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 PLEKHF2Q9H8W4 249 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 GPR84Q9NQS5 396 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 NECAP2Q9NVZ3 263 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 EHFQ9NZC4 300 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 TBX21Q9UL17 535 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 FOXA2Q9Y261 457 aaPredicted RBP2.09□□□□□ -2.07
VPS41-206ENST00000418457 CBY1Q9Y3M2 126 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 LSM5Q9Y4Y9 91 aaKnown RBP2.09□□□□□ -2.07
VPS41-206ENST00000418457 PUS1Q9Y606 427 aaKnown RBP eCLIP2.09□□□□□ -2.07
VPS41-206ENST00000418457 SMAD5-AS1Q9Y6J3 95 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 V9GYS6 101 aa2.09□□□□□ -2.07
VPS41-206ENST00000418457 PTPRSQ13332 1948 aa2.09□□□□□ -2.08
VPS41-206ENST00000418457 A0A087WZY1 265 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 A0A0U1RQV5 110 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 A0A1B0GV90 55 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 LRP5LA4QPB2 252 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 ZNF726A6NNF4 738 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 A8MWP6 167 aa2.08□□□□□ -2.08
VPS41-206ENST00000418457 C9J4A7 227 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms