RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 SNIP1Q8TAD8 396 aaKnown RBP9.98□□□□□ -0.81
LIMK1-202ENST00000418310 PRO3102Q9H379 93 aa9.98□□□□□ -0.81
LIMK1-202ENST00000418310 SDF2L1Q9HCN8 221 aa9.98□□□□□ -0.81
LIMK1-202ENST00000418310 CISD1Q9NZ45 108 aaKnown RBP9.98□□□□□ -0.81
LIMK1-202ENST00000418310 TREM2Q9NZC2 230 aa9.98□□□□□ -0.81
LIMK1-202ENST00000418310 VAX2Q9UIW0 290 aa9.98□□□□□ -0.81
LIMK1-202ENST00000418310 PIEZO2Q9H5I5 2752 aa9.98□□□□□ -0.81
LIMK1-202ENST00000418310 TNRC6AQ8NDV7 1962 aaKnown RBP9.98□□□□□ -0.81
LIMK1-202ENST00000418310 TRAV38-1A0A0B4J264 116 aa9.98□□□□□ -0.81
LIMK1-202ENST00000418310 LINC00473A8K010 186 aa9.98□□□□□ -0.81
LIMK1-202ENST00000418310 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.98□□□□□ -0.81
LIMK1-202ENST00000418310 HOXC12P31275 282 aa9.98□□□□□ -0.81
LIMK1-202ENST00000418310 CHRNA7P36544 502 aa9.98□□□□□ -0.81
LIMK1-202ENST00000418310 CD81P60033 236 aa9.98□□□□□ -0.81
LIMK1-202ENST00000418310 GAMTQ14353 236 aa9.98□□□□□ -0.81
LIMK1-202ENST00000418310 SRSF7Q16629 238 aaKnown RBP eCLIP9.98□□□□□ -0.81
LIMK1-202ENST00000418310 PEAR1Q5VY43 1037 aaPredicted RBP9.98□□□□□ -0.81
LIMK1-202ENST00000418310 CST9LP1Q5W188 147 aa9.98□□□□□ -0.81
LIMK1-202ENST00000418310 H2BFWTQ7Z2G1 175 aa9.98□□□□□ -0.81
LIMK1-202ENST00000418310 DTD1Q8TEA8 209 aa9.98□□□□□ -0.81
LIMK1-202ENST00000418310 GTF3AQ92664 365 aaKnown RBP9.98□□□□□ -0.81
LIMK1-202ENST00000418310 LSM10Q969L4 123 aaKnown RBP9.98□□□□□ -0.81
LIMK1-202ENST00000418310 TMEM30CPA0ZSE6 113 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 C1QTNF9BB2RNN3 333 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 NKX2-8O15522 239 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 CYB5R3P00387 301 aaPredicted RBP9.97□□□□□ -0.81
LIMK1-202ENST00000418310 IGHV2-70P01814 119 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 PRSS8Q16651 343 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 LINC00596Q86U02 117 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 ZPBPQ9BS86 351 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 SPRY4Q9C004 299 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 OPA3Q9H6K4 179 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 PATZ1Q9HBE1 687 aaKnown RBP9.97□□□□□ -0.81
LIMK1-202ENST00000418310 MEF2BQ02080 365 aaPredicted RBP9.97□□□□□ -0.81
LIMK1-202ENST00000418310 COL10A1Q03692 680 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 OR10P1Q8NGE3 313 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 TMEM37Q8WXS4 190 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 DDA1Q9BW61 102 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 GP6Q9HCN6 339 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 A0A087WWC5 75 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 IFNL4K9M1U5 179 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 FCGR3BO75015 233 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 IFNA1P01562 189 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 TGFBR3Q03167 851 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 MRGPRGQ86SM5 289 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 ZNF709Q8N972 641 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 COQ2Q96H96 371 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 PARLQ9H300 379 aa9.97□□□□□ -0.81
LIMK1-202ENST00000418310 FAM201AQ5SY85 155 aa9.96□□□□□ -0.81
LIMK1-202ENST00000418310 C1QL4Q86Z23 238 aa9.96□□□□□ -0.81
LIMK1-202ENST00000418310 HIST3H2BBQ8N257 126 aa9.96□□□□□ -0.81
LIMK1-202ENST00000418310 ZNF645Q8N7E2 425 aa9.96□□□□□ -0.81
LIMK1-202ENST00000418310 MDS2Q8NDY4 140 aa9.96□□□□□ -0.81
LIMK1-202ENST00000418310 RAB24Q969Q5 203 aa9.96□□□□□ -0.81
LIMK1-202ENST00000418310 PCGF1Q9BSM1 259 aa9.96□□□□□ -0.81
LIMK1-202ENST00000418310 HINT2Q9BX68 163 aa9.96□□□□□ -0.81
LIMK1-202ENST00000418310 GPR87Q9BY21 358 aa9.96□□□□□ -0.81
LIMK1-202ENST00000418310 GNG12Q9UBI6 72 aa9.96□□□□□ -0.81
LIMK1-202ENST00000418310 WASF3Q9UPY6 502 aa9.96□□□□□ -0.81
LIMK1-202ENST00000418310 TRBV6-6A0A0A6YYG2 114 aa9.96□□□□□ -0.82
LIMK1-202ENST00000418310 H7BYZ3 331 aa9.96□□□□□ -0.82
LIMK1-202ENST00000418310 CD59P13987 128 aa9.96□□□□□ -0.82
LIMK1-202ENST00000418310 PSMB3P49720 205 aa9.96□□□□□ -0.82
LIMK1-202ENST00000418310 FAM3BP58499 235 aaPredicted RBP9.96□□□□□ -0.82
LIMK1-202ENST00000418310 FOXF2Q12947 444 aa9.96□□□□□ -0.82
LIMK1-202ENST00000418310 MOB1BQ7L9L4 216 aa9.96□□□□□ -0.82
LIMK1-202ENST00000418310 FER1L6-AS2Q96M78 137 aa9.96□□□□□ -0.82
LIMK1-202ENST00000418310 SIRT7Q9NRC8 400 aa9.96□□□□□ -0.82
LIMK1-202ENST00000418310 PTPRZ1P23471 2315 aaPredicted RBP9.96□□□□□ -0.82
LIMK1-202ENST00000418310 TMEM265A0A087WTH1 108 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 LRRC30A6NM36 301 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 BRWD1-AS2P59051 145 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 ERVK11-1P61568 191 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 P2RY6Q15077 328 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 BSXQ3C1V8 233 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 UNQ6494/PRO21346Q6UXR6 183 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 QTRT1Q9BXR0 403 aaKnown RBP9.95□□□□□ -0.82
LIMK1-202ENST00000418310 C21orf140B9A014 251 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 IFNA10P01566 189 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 CATR1Q13166 79 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 MSMO1Q15800 293 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 TMEM241Q24JQ0 296 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 SP5Q6BEB4 398 aaPredicted RBP9.95□□□□□ -0.82
LIMK1-202ENST00000418310 OR2Z1Q8NG97 314 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 PACRGQ96M98 296 aaPredicted RBP9.95□□□□□ -0.82
LIMK1-202ENST00000418310 DERL1Q9BUN8 251 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 ADGRG4Q8IZF6 3080 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 SEC14L6B5MCN3 397 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 CDX4O14627 284 aaPredicted RBP9.95□□□□□ -0.82
LIMK1-202ENST00000418310 SELLP14151 372 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 GZMHP20718 246 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 GALR1P47211 349 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 SERF2P84101 59 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 UTF1Q5T230 341 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 ZNF600Q6ZNG1 722 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 OR13D1Q8NGV5 346 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 MBD3L1Q8WWY6 194 aa9.95□□□□□ -0.82
LIMK1-202ENST00000418310 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.95□□□□□ -0.82
LIMK1-202ENST00000418310 MBNL3Q9NUK0 354 aaKnown RBP9.95□□□□□ -0.82
LIMK1-202ENST00000418310 TNCP24821 2201 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms