RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 VSIG10L2P0DP72 767 aa9.9□□□□□ -0.82
SKA1-203ENST00000417656 MC5RP33032 325 aa9.9□□□□□ -0.82
SKA1-203ENST00000417656 RFX2P48378 723 aa9.9□□□□□ -0.82
SKA1-203ENST00000417656 THBS3P49746 956 aa9.9□□□□□ -0.82
SKA1-203ENST00000417656 TMEM17Q86X19 198 aa9.9□□□□□ -0.82
SKA1-203ENST00000417656 PDPNQ86YL7 162 aa9.9□□□□□ -0.82
SKA1-203ENST00000417656 LYSMD2Q8IV50 215 aa9.9□□□□□ -0.82
SKA1-203ENST00000417656 OR8H1Q8NGG4 311 aa9.9□□□□□ -0.82
SKA1-203ENST00000417656 C15orf40Q8WUR7 153 aa9.9□□□□□ -0.82
SKA1-203ENST00000417656 SECTM1Q8WVN6 248 aa9.9□□□□□ -0.82
SKA1-203ENST00000417656 FXYD6Q9H0Q3 95 aa9.9□□□□□ -0.82
SKA1-203ENST00000417656 SLC35D1Q9NTN3 355 aa9.9□□□□□ -0.82
SKA1-203ENST00000417656 LIN7CQ9NUP9 197 aaKnown RBP9.9□□□□□ -0.82
SKA1-203ENST00000417656 RBMX2Q9Y388 322 aaKnown RBP9.9□□□□□ -0.82
SKA1-203ENST00000417656 LINC00473A8K010 186 aa9.89□□□□□ -0.83
SKA1-203ENST00000417656 NBR2O15453 112 aa9.89□□□□□ -0.83
SKA1-203ENST00000417656 PEX14O75381 377 aa9.89□□□□□ -0.83
SKA1-203ENST00000417656 IGLV2-14P01704 120 aa9.89□□□□□ -0.83
SKA1-203ENST00000417656 IGKV1-16P04430 117 aa9.89□□□□□ -0.83
SKA1-203ENST00000417656 TNFSF8P32971 234 aa9.89□□□□□ -0.83
SKA1-203ENST00000417656 DUTP33316 252 aaKnown RBP9.89□□□□□ -0.83
SKA1-203ENST00000417656 HERV-K104P61576 105 aa9.89□□□□□ -0.83
SKA1-203ENST00000417656 DYRK1AQ13627 763 aa9.89□□□□□ -0.83
SKA1-203ENST00000417656 ZNF660Q6AZW8 331 aaPredicted RBP9.89□□□□□ -0.83
SKA1-203ENST00000417656 HIST2H2BDQ6DRA6 164 aa9.89□□□□□ -0.83
SKA1-203ENST00000417656 PYHIN1Q6K0P9 492 aa9.89□□□□□ -0.83
SKA1-203ENST00000417656 SHISA2Q6UWI4 295 aa9.89□□□□□ -0.83
SKA1-203ENST00000417656 OVCH2Q7RTZ1 564 aa9.89□□□□□ -0.83
SKA1-203ENST00000417656 FAM71E2Q8N5Q1 922 aa9.89□□□□□ -0.83
SKA1-203ENST00000417656 SMIM4Q8WVI0 70 aa9.89□□□□□ -0.83
SKA1-203ENST00000417656 RASL11BQ9BPW5 248 aa9.89□□□□□ -0.83
SKA1-203ENST00000417656 ZNF2Q9BSG1 426 aaPredicted RBP9.89□□□□□ -0.83
SKA1-203ENST00000417656 SLC5A7Q9GZV3 580 aa9.89□□□□□ -0.83
SKA1-203ENST00000417656 MMP27Q9H306 513 aa9.89□□□□□ -0.83
SKA1-203ENST00000417656 CCL28Q9NRJ3 127 aa9.89□□□□□ -0.83
SKA1-203ENST00000417656 KLK11Q9UBX7 282 aa9.89□□□□□ -0.83
SKA1-203ENST00000417656 MTFP1Q9UDX5 166 aa9.89□□□□□ -0.83
SKA1-203ENST00000417656 GABARAPH6UMI1 98 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 M0QYG6 137 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 RBBP9O75884 186 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 SLC22A5O76082 557 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 NDUFA3O95167 84 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 MRPS10P82664 201 aaKnown RBP9.88□□□□□ -0.83
SKA1-203ENST00000417656 ACTBL2Q562R1 376 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 OR2B11Q5JQS5 317 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 KCTD9Q7L273 389 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 SLC35E3Q7Z769 313 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 C11orf44Q8N8P7 122 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 BVESQ8NE79 360 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 GIMAP1Q8WWP7 306 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 FCAMRQ8WWV6 532 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 DDB2Q92466 427 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 MOB3AQ96BX8 217 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 ADTRPQ96IZ2 230 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 GPHA2Q96T91 129 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 CITED1Q99966 193 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 HSPB9Q9BQS6 159 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 WNT10AQ9GZT5 417 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 TAS2R8Q9NYW2 309 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 NDUFA13Q9P0J0 144 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 A3GALT2U3KPV4 340 aa9.88□□□□□ -0.83
SKA1-203ENST00000417656 TNFSF12O43508 249 aa9.87□□□□□ -0.83
SKA1-203ENST00000417656 SMCPP49901 116 aaPredicted RBP9.87□□□□□ -0.83
SKA1-203ENST00000417656 RPL30P62888 115 aaKnown RBP9.87□□□□□ -0.83
SKA1-203ENST00000417656 EIF4EBP1Q13541 118 aaPredicted RBP9.87□□□□□ -0.83
SKA1-203ENST00000417656 RTL8BQ17RB0 113 aa9.87□□□□□ -0.83
SKA1-203ENST00000417656 C5orf64Q2M2E5 130 aa9.87□□□□□ -0.83
SKA1-203ENST00000417656 RNASE10Q5GAN6 216 aaKnown RBP9.87□□□□□ -0.83
SKA1-203ENST00000417656 VAX1Q5SQQ9 334 aa9.87□□□□□ -0.83
SKA1-203ENST00000417656 NPBQ8NG41 125 aa9.87□□□□□ -0.83
SKA1-203ENST00000417656 WIPF2Q8TF74 440 aaPredicted RBP9.87□□□□□ -0.83
SKA1-203ENST00000417656 TCTEX1D2Q8WW35 142 aa9.87□□□□□ -0.83
SKA1-203ENST00000417656 DGCR14Q96DF8 476 aaKnown RBP9.87□□□□□ -0.83
SKA1-203ENST00000417656 HARBI1Q96MB7 349 aa9.87□□□□□ -0.83
SKA1-203ENST00000417656 TINAGL1Q9GZM7 467 aaPredicted RBP9.87□□□□□ -0.83
SKA1-203ENST00000417656 FBXL15Q9H469 300 aa9.87□□□□□ -0.83
SKA1-203ENST00000417656 KIAA1456Q9P272 454 aa9.87□□□□□ -0.83
SKA1-203ENST00000417656 RABL2AQ9UBK7 228 aaPredicted RBP9.87□□□□□ -0.83
SKA1-203ENST00000417656 ZNF107Q9UII5 783 aaPredicted RBP9.87□□□□□ -0.83
SKA1-203ENST00000417656 RABL2BQ9UNT1 228 aa9.87□□□□□ -0.83
SKA1-203ENST00000417656 V9GYH0 126 aa9.87□□□□□ -0.83
SKA1-203ENST00000417656 FABP12A6NFH5 140 aa9.86□□□□□ -0.83
SKA1-203ENST00000417656 LINC01548A6NM66 108 aa9.86□□□□□ -0.83
SKA1-203ENST00000417656 RRHO14718 337 aa9.86□□□□□ -0.83
SKA1-203ENST00000417656 CTDSPLO15194 276 aa9.86□□□□□ -0.83
SKA1-203ENST00000417656 FCGR3BO75015 233 aa9.86□□□□□ -0.83
SKA1-203ENST00000417656 CRYZL1O95825 349 aa9.86□□□□□ -0.83
SKA1-203ENST00000417656 IGHG2P01859 326 aa9.86□□□□□ -0.83
SKA1-203ENST00000417656 HLA-DRB1P01911 266 aa9.86□□□□□ -0.83
SKA1-203ENST00000417656 CD3DP04234 171 aa9.86□□□□□ -0.83
SKA1-203ENST00000417656 S100A5P33763 92 aa9.86□□□□□ -0.83
SKA1-203ENST00000417656 TSPAN5P62079 268 aa9.86□□□□□ -0.83
SKA1-203ENST00000417656 RPS16P62249 146 aaKnown RBP9.86□□□□□ -0.83
SKA1-203ENST00000417656 CBX3Q13185 183 aa9.86□□□□□ -0.83
SKA1-203ENST00000417656 PLGLAQ15195 96 aa9.86□□□□□ -0.83
SKA1-203ENST00000417656 MSMO1Q15800 293 aa9.86□□□□□ -0.83
SKA1-203ENST00000417656 C10orf99Q6UWK7 81 aa9.86□□□□□ -0.83
SKA1-203ENST00000417656 DHRS11Q6UWP2 260 aa9.86□□□□□ -0.83
SKA1-203ENST00000417656 ZNF818PQ6ZRF7 136 aa9.86□□□□□ -0.83
SKA1-203ENST00000417656 OR4D10Q8NGI6 311 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms