RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 DIAPH2-AS1Q14236 149 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 PLGLAQ15195 96 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 MSMO1Q15800 293 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 ZNF660Q6AZW8 331 aaPredicted RBP6.84□□□□□ -1.32
TRIM48-201ENST00000417545 LHFPL1Q86WI0 220 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 SGPP2Q8IWX5 399 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 ODF3L1Q8IXM7 274 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 CENPSQ8N2Z9 138 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 ZDHHC22Q8N966 263 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 OR2T10Q8NGZ9 312 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 OR4S2Q8NH73 311 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 RNASE11Q8TAA1 199 aaKnown RBP6.84□□□□□ -1.32
TRIM48-201ENST00000417545 C17orf50Q8WW18 174 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 NABP2Q9BQ15 211 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 ZNF251Q9BRH9 671 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 AGMATQ9BSE5 352 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 RSRP1Q9BUV0 290 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 PALMDQ9NP74 551 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 SLC2A9Q9NRM0 540 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 GAB2Q9UQC2 676 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 WASHC3Q9Y3C0 194 aa6.84□□□□□ -1.32
TRIM48-201ENST00000417545 SOX21Q9Y651 276 aaPredicted RBP6.84□□□□□ -1.32
TRIM48-201ENST00000417545 CELSR1Q9NYQ6 3014 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 A0A1W2PPI3 338 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 LY6LH3BQJ8 138 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 SHOXO15266 292 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 HOXA3O43365 443 aaPredicted RBP6.83□□□□□ -1.32
TRIM48-201ENST00000417545 FCGR3BO75015 233 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 PEX14O75381 377 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 MOSP00540 346 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 CRYBA1P05813 215 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 ANXA3P12429 323 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 CD24P25063 80 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 CD1BP29016 333 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 GNRHRP30968 328 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 DUTP33316 252 aaKnown RBP6.83□□□□□ -1.32
TRIM48-201ENST00000417545 RPS16P62249 146 aaKnown RBP6.83□□□□□ -1.32
TRIM48-201ENST00000417545 HNF4GQ14541 408 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 TRIM16LQ309B1 348 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 TBC1D26Q86UD7 250 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 LDLRAD3Q86YD5 345 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 PDPNQ86YL7 162 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 DYNAPQ8N1N2 210 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 BVESQ8NE79 360 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 ST6GALNAC6Q969X2 333 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 HARBI1Q96MB7 349 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 MEGF9Q9H1U4 602 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 RAB18Q9NP72 206 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 KIAA1456Q9P272 454 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 KCNIP3Q9Y2W7 256 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 HIVEP2P31629 2446 aa6.83□□□□□ -1.32
TRIM48-201ENST00000417545 DNAJC9-AS1A6NH13 148 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 NCBP2LA6PVI3 153 aaKnown RBP6.82□□□□□ -1.32
TRIM48-201ENST00000417545 TRIM77I1YAP6 450 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 ARPC1BO15143 372 aaKnown RBP6.82□□□□□ -1.32
TRIM48-201ENST00000417545 PLA2G10O15496 165 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 NDUFB6O95139 128 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 CRYZL1O95825 349 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 IGHV4-59P01825 116 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 SERPINE2P07093 398 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 CT45A6P0DMU7 189 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 CT45A5P0DMU8 189 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 CT45A7P0DMV0 189 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 VAMP1P23763 118 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 DYNLT3P51808 116 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 ERVK-16P61578 105 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 MMDQ15546 238 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 AANATQ16613 207 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 C4orf46Q504U0 113 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 DHRS7BQ6IAN0 325 aaPredicted RBP6.82□□□□□ -1.32
TRIM48-201ENST00000417545 PLET1Q6UQ28 207 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 Q6YL49 198 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 SPAG16Q8N0X2 631 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 CD300LFQ8TDQ1 290 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 FLYWCH2Q96CP2 140 aaKnown RBP6.82□□□□□ -1.32
TRIM48-201ENST00000417545 DUX5Q96PT3 197 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 GPHA2Q96T91 129 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 AIFM2Q9BRQ8 373 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 SLC25A33Q9BSK2 321 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 C20orf85Q9H1P6 137 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 NUDT15Q9NV35 164 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 C1RLQ9NZP8 487 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 VPREB3Q9UKI3 123 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 TBC1D24Q9ULP9 559 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 NUBP2Q9Y5Y2 271 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 POMT1Q9Y6A1 747 aa6.82□□□□□ -1.32
TRIM48-201ENST00000417545 ZNF469Q96JG9 3925 aaPredicted RBP6.82□□□□□ -1.32
TRIM48-201ENST00000417545 ACANP16112 2415 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 TRAV6A0A075B6T7 132 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 VGLL3A8MV65 326 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 H0YJW9 148 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 MPPED1O15442 326 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 PGLYRP1O75594 196 aaPredicted RBP6.81□□□□□ -1.32
TRIM48-201ENST00000417545 ATG12O94817 140 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 VENTXO95231 258 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 HRASP01112 189 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 TCRBP04435 133 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 H2AFB2P0C5Z0 115 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 IER3P46695 156 aa6.81□□□□□ -1.32
TRIM48-201ENST00000417545 RND3P61587 244 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms