RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 GALMQ96C23 342 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 WDR12Q9GZL7 423 aaKnown RBP10.11□□□□□ -0.79
LINC00339-202ENST00000416769 TAS2R8Q9NYW2 309 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 ZNF107Q9UII5 783 aaPredicted RBP10.11□□□□□ -0.79
LINC00339-202ENST00000416769 ANXA10Q9UJ72 324 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 RBMX2Q9Y388 322 aaKnown RBP10.11□□□□□ -0.79
LINC00339-202ENST00000416769 DNAH7Q8WXX0 4024 aa10.11□□□□□ -0.79
LINC00339-202ENST00000416769 IGKV1D-8A0A087WSZ0 117 aa10.1□□□□□ -0.79
LINC00339-202ENST00000416769 J3QR06 171 aa10.1□□□□□ -0.79
LINC00339-202ENST00000416769 FABP7O15540 132 aa10.1□□□□□ -0.79
LINC00339-202ENST00000416769 FAM106CPP0CH98 169 aa10.1□□□□□ -0.79
LINC00339-202ENST00000416769 SSTR5P35346 364 aa10.1□□□□□ -0.79
LINC00339-202ENST00000416769 ECI1P42126 302 aa10.1□□□□□ -0.79
LINC00339-202ENST00000416769 C5orf24Q7Z6I8 188 aa10.1□□□□□ -0.79
LINC00339-202ENST00000416769 SLC35E3Q7Z769 313 aa10.1□□□□□ -0.79
LINC00339-202ENST00000416769 STPG2Q8N412 459 aa10.1□□□□□ -0.79
LINC00339-202ENST00000416769 TMEM229BQ8NBD8 167 aa10.1□□□□□ -0.79
LINC00339-202ENST00000416769 OR1L1Q8NH94 360 aa10.1□□□□□ -0.79
LINC00339-202ENST00000416769 UBALD1Q8TB05 177 aa10.1□□□□□ -0.79
LINC00339-202ENST00000416769 SDHCQ99643 169 aaPredicted RBP10.1□□□□□ -0.79
LINC00339-202ENST00000416769 MCRIP2Q9BUT9 160 aaKnown RBP10.1□□□□□ -0.79
LINC00339-202ENST00000416769 GPR61Q9BZJ8 451 aa10.1□□□□□ -0.79
LINC00339-202ENST00000416769 PSG11Q9UQ72 335 aa10.1□□□□□ -0.79
LINC00339-202ENST00000416769 M0QZK8 103 aa10.09□□□□□ -0.79
LINC00339-202ENST00000416769 CEACAM3P40198 252 aa10.09□□□□□ -0.79
LINC00339-202ENST00000416769 ARHGDIBP52566 201 aa10.09□□□□□ -0.79
LINC00339-202ENST00000416769 PRRX1P54821 245 aa10.09□□□□□ -0.79
LINC00339-202ENST00000416769 Q3ZCU0 254 aa10.09□□□□□ -0.79
LINC00339-202ENST00000416769 RNASE12Q5GAN4 147 aaKnown RBP10.09□□□□□ -0.79
LINC00339-202ENST00000416769 LY6G6FQ5SQ64 297 aa10.09□□□□□ -0.79
LINC00339-202ENST00000416769 STEAP3Q658P3 488 aa10.09□□□□□ -0.79
LINC00339-202ENST00000416769 PRR18Q8N4B5 295 aa10.09□□□□□ -0.79
LINC00339-202ENST00000416769 OR5AP2Q8NGF4 316 aa10.09□□□□□ -0.79
LINC00339-202ENST00000416769 OR9G1Q8NH87 305 aa10.09□□□□□ -0.79
LINC00339-202ENST00000416769 CHPT1Q8WUD6 406 aa10.09□□□□□ -0.79
LINC00339-202ENST00000416769 SNAPC3Q92966 411 aa10.09□□□□□ -0.79
LINC00339-202ENST00000416769 TSC22D3Q99576 134 aa10.09□□□□□ -0.79
LINC00339-202ENST00000416769 CABLES2Q9BTV7 478 aa10.09□□□□□ -0.79
LINC00339-202ENST00000416769 CCDC32Q9BV29 185 aa10.09□□□□□ -0.79
LINC00339-202ENST00000416769 TOLLIPQ9H0E2 274 aa10.09□□□□□ -0.79
LINC00339-202ENST00000416769 OR2S2Q9NQN1 319 aa10.09□□□□□ -0.79
LINC00339-202ENST00000416769 TRBV6-7A0A0A0MS04 114 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 IGKV1-6A0A0C4DH72 117 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 ZNF736B4DX44 427 aaPredicted RBP10.08□□□□□ -0.8
LINC00339-202ENST00000416769 SDCBPO00560 298 aaPredicted RBP10.08□□□□□ -0.8
LINC00339-202ENST00000416769 LANCL1O43813 399 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 YPEL1O60688 119 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 IGHG2P01859 326 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 NHLRC4P0CG21 123 aaPredicted RBP10.08□□□□□ -0.8
LINC00339-202ENST00000416769 ZBTB25P24278 435 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 GPR12P47775 334 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 OR3A3P47888 321 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 TAS2R46P59540 309 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 TAS2R19P59542 299 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 ARPC4P59998 168 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 BAK1Q16611 211 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 MORN2Q502X0 79 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 IGSF11Q5DX21 431 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 CASC10Q5T4H9 136 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 CCDC144NLQ6NUI1 221 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 THNSL2Q86YJ6 484 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 YPEL2Q96QA6 119 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 HSPB9Q9BQS6 159 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 ZFP57Q9NU63 452 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 GFOD1Q9NXC2 390 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 JPT1Q9UK76 154 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 DNAH1Q9P2D7 4330 aa10.08□□□□□ -0.8
LINC00339-202ENST00000416769 ANKRD20A5PA0PJZ0 165 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 OOSP1A8MZH6 123 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 SEC14L6B5MCN3 397 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 RGS11O94810 467 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 CD74P04233 296 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 FCER2P06734 321 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 TBPP20226 339 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 HLA-DMAP28067 261 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 CEACAM6P40199 344 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 AP3S2P59780 193 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 CDK10Q15131 360 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 ACTBL2Q562R1 376 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 ASPHD1Q5U4P2 390 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 OVCH2Q7RTZ1 564 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 SBSPONQ8IVN8 264 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 TOMM5Q8N4H5 51 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 Q8N9W7 124 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 OR52L2PQ8NGH6 319 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 OR5H2Q8NGV7 314 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 OR10J5Q8NHC4 309 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 IL1F10Q8WWZ1 152 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 DEDD2Q8WXF8 326 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 TRIM63Q969Q1 353 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 EAF1Q96JC9 268 aaPredicted RBP10.07□□□□□ -0.8
LINC00339-202ENST00000416769 GNG12Q9UBI6 72 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 STARD9Q9P2P6 4700 aa10.07□□□□□ -0.8
LINC00339-202ENST00000416769 IGHV3-43A0A0B4J1X8 118 aa10.06□□□□□ -0.8
LINC00339-202ENST00000416769 C3orf84H3BNL1 204 aa10.06□□□□□ -0.8
LINC00339-202ENST00000416769 ITGB1BP1O14713 200 aa10.06□□□□□ -0.8
LINC00339-202ENST00000416769 HSD17B6O14756 317 aa10.06□□□□□ -0.8
LINC00339-202ENST00000416769 BET1O15155 118 aa10.06□□□□□ -0.8
LINC00339-202ENST00000416769 HSPA12AO43301 675 aa10.06□□□□□ -0.8
LINC00339-202ENST00000416769 FGF16O43320 207 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms