RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 MCRIP1C9JLW8 97 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 J3QRE1 110 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 ARPC1BO15143 372 aaKnown RBP7.05□□□□□ -1.28
LINC01238-201ENST00000416204 RBMXL2O75526 392 aaKnown RBP7.05□□□□□ -1.28
LINC01238-201ENST00000416204 MAS1P04201 325 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 CT45A6P0DMU7 189 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 CT45A5P0DMU8 189 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 CT45A7P0DMV0 189 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 S100A5P33763 92 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 ZNF93P35789 620 aaPredicted RBP7.05□□□□□ -1.28
LINC01238-201ENST00000416204 ETV1P50549 477 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 PPP5CP53041 499 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 LINC00205P59089 165 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 ZNF45Q02386 682 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 PSG5Q15238 335 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 Q3ZCU0 254 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 AKIRIN2Q53H80 203 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 C6orf183Q5T699 404 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 DDI2Q5TDH0 399 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 CEMP1Q6PRD7 247 aaPredicted RBP7.05□□□□□ -1.28
LINC01238-201ENST00000416204 TMPRSS11AQ6ZMR5 421 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 Q6ZNX1 250 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 KCTD20Q7Z5Y7 419 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 POC5Q8NA72 575 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 DRAXINQ8NBI3 349 aaPredicted RBP7.05□□□□□ -1.28
LINC01238-201ENST00000416204 OR5AK2Q8NH90 309 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 UFD1Q92890 307 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 WDR89Q96FK6 387 aaPredicted RBP7.05□□□□□ -1.28
LINC01238-201ENST00000416204 S100A13Q99584 98 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 ALG8Q9BVK2 526 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 BANF2Q9H503 90 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 SLA2Q9H6Q3 261 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 CLEC2DQ9UHP7 191 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 RNF150Q9ULK6 438 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 DNAH17Q9UFH2 4485 aa7.05□□□□□ -1.28
LINC01238-201ENST00000416204 NUPR2A6NF83 97 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 GPX5O75715 221 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 LIMS3P0CW19 117 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 LIMS4P0CW20 117 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 FGF9P31371 208 aaPredicted RBP7.04□□□□□ -1.28
LINC01238-201ENST00000416204 ETV6P41212 452 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 RORCP51449 518 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 PJVKQ0ZLH3 352 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 FXYD3Q14802 87 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 RGS21Q2M5E4 152 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 RPEL1Q2QD12 228 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 MPV17LQ2QL34 196 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 NHLRC3Q5JS37 347 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 ZNF529Q6P280 563 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 MFSD4AQ8N468 514 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 ACBD7Q8N6N7 88 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 BVESQ8NE79 360 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 OR2AK2Q8NG84 335 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 IL1F10Q8WWZ1 152 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 CPNE2Q96FN4 548 aaPredicted RBP7.04□□□□□ -1.28
LINC01238-201ENST00000416204 MRPL48Q96GC5 212 aaKnown RBP7.04□□□□□ -1.28
LINC01238-201ENST00000416204 ABHD14BQ96IU4 210 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 CENPOQ9BU64 300 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 IFI27L2Q9H2X8 130 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 SLC2A8Q9NY64 477 aa7.04□□□□□ -1.28
LINC01238-201ENST00000416204 PEF1Q9UBV8 284 aaKnown RBP7.04□□□□□ -1.28
LINC01238-201ENST00000416204 A0A1B0GVG6 124 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 TRDV1A0A1B0GX56 115 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 TMEM212A6NML5 194 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 H0YJW9 148 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 GTF2F2P13984 249 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 TAS2R43P59537 309 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 PRR20EP86478 221 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 PRR20CP86479 221 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 PRR20DP86480 221 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 PRR20BP86481 221 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 PRR20AP86496 221 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 TRAM1Q15629 374 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 STEAP3Q658P3 488 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 ZNF562Q6V9R5 426 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 LINC00596Q86U02 117 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 ZNF485Q8NCK3 441 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 OR13C5Q8NGS8 318 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 MRPL30Q8TCC3 161 aaKnown RBP7.03□□□□□ -1.28
LINC01238-201ENST00000416204 DYNLRB2Q8TF09 96 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 TMEM106AQ96A25 262 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 ERVK13-1Q9NX77 482 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 COA4Q9NYJ1 87 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 IL36GQ9NZH8 169 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 KCNIP1Q9NZI2 227 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 RCC2Q9P258 522 aaKnown RBP7.03□□□□□ -1.28
LINC01238-201ENST00000416204 DNAH11Q96DT5 4516 aa7.03□□□□□ -1.28
LINC01238-201ENST00000416204 A0A0G2JLM5 398 aa7.02□□□□□ -1.29
LINC01238-201ENST00000416204 J3QRK9 145 aa7.02□□□□□ -1.29
LINC01238-201ENST00000416204 HLA-AP01891 365 aaKnown RBP7.02□□□□□ -1.29
LINC01238-201ENST00000416204 PRH1P02810 166 aa7.02□□□□□ -1.29
LINC01238-201ENST00000416204 IGKV1-16P04430 117 aa7.02□□□□□ -1.29
LINC01238-201ENST00000416204 BDKRB2P30411 391 aa7.02□□□□□ -1.29
LINC01238-201ENST00000416204 MECP2P51608 486 aaKnown RBP7.02□□□□□ -1.29
LINC01238-201ENST00000416204 PPP3R1P63098 170 aa7.02□□□□□ -1.29
LINC01238-201ENST00000416204 SSBP2P81877 361 aaPredicted RBP7.02□□□□□ -1.29
LINC01238-201ENST00000416204 TATDN3Q17R31 274 aa7.02□□□□□ -1.29
LINC01238-201ENST00000416204 TMEM30BQ3MIR4 351 aa7.02□□□□□ -1.29
LINC01238-201ENST00000416204 LIPKQ5VXJ0 399 aa7.02□□□□□ -1.29
LINC01238-201ENST00000416204 DMKNQ6E0U4 476 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms