RNA–Protein interactions for RNA: ENST00000415361.6

CTNND1-206, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-206ENST00000415361 GALNT14Q96FL9 552 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 RCC2Q9P258 522 aaKnown RBP7.28□□□□□ -1.24
CTNND1-206ENST00000415361 V9GYH0 126 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 TRAV8-7A0A075B6U6 113 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 hCG_38984A0A1B0GV85 526 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 TMEM229AB2RXF0 380 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 J3KRW8 73 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 REG1BP48304 166 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 GZMMP51124 257 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 RPS4XP62701 263 aaKnown RBP7.28□□□□□ -1.24
CTNND1-206ENST00000415361 C1orf162Q8NEQ5 155 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-206ENST00000415361 OR10D4PQ8NGN7 298 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 IGKV3-7A0A075B6H7 116 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 TRBV5-5A0A0J9YX44 114 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 C19orf67A6NJJ6 358 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 UQCRFS1P47985 274 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 IGLV3-21P80748 117 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-206ENST00000415361 FAM53AQ6NSI3 398 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-206ENST00000415361 RTN4RL2Q86UN3 420 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 TMEM54Q969K7 222 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 DCTN5Q9BTE1 182 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 RALYQ9UKM9 306 aaKnown RBP7.28□□□□□ -1.24
CTNND1-206ENST00000415361 ODAMA1E959 279 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 MT-ND6P03923 174 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 SRSF9Q13242 221 aaKnown RBP eCLIP7.28□□□□□ -1.24
CTNND1-206ENST00000415361 FAM24BQ8N5W8 94 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 LSM10Q969L4 123 aaKnown RBP7.28□□□□□ -1.24
CTNND1-206ENST00000415361 PRSS27Q9BQR3 290 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 KLK13Q9UKR3 277 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 PXMP4Q9Y6I8 212 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 CACNA1BQ00975 2339 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 CACNA1HO95180 2353 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 PF4P02776 101 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 CSN3P07498 182 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 LIMS1P48059 325 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 DLK1P80370 383 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 TWIST1Q15672 202 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 LDLRAD3Q86YD5 345 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 SCMH1Q96GD3 660 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 GPA33Q99795 319 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 MOB4Q9Y3A3 225 aa7.28□□□□□ -1.24
CTNND1-206ENST00000415361 MRPS16Q9Y3D3 137 aaKnown RBP7.28□□□□□ -1.24
CTNND1-206ENST00000415361 EP400Q96L91 3159 aa7.27□□□□□ -1.24
CTNND1-206ENST00000415361 LOC390937A0A1W2PQ73 354 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 RD3LP0DJH9 198 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 C10orf111Q8N326 155 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 DUX5Q96PT3 197 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 COL25A1Q9BXS0 654 aaPredicted RBP7.27□□□□□ -1.25
CTNND1-206ENST00000415361 TMEM222Q9H0R3 208 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 AP4M1O00189 453 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 C1QCP02747 245 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 MUC1P15941 1255 aaPredicted RBP7.27□□□□□ -1.25
CTNND1-206ENST00000415361 WNT5AP41221 380 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 SNRPD3P62318 126 aaKnown RBP7.27□□□□□ -1.25
CTNND1-206ENST00000415361 C11orf91Q3C1V1 193 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 TIMM23BQ5SRD1 257 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 ADAD2Q8NCV1 583 aaKnown RBP7.27□□□□□ -1.25
CTNND1-206ENST00000415361 CHODLQ9H9P2 273 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 ZFC3H1O60293 1989 aaKnown RBP7.27□□□□□ -1.25
CTNND1-206ENST00000415361 TMEM238LA0A1B0GVL6 79 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 A1L4Q6 167 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 A6NJY4 79 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 M0QZK8 103 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 GGCTO75223 188 aaKnown RBP7.27□□□□□ -1.25
CTNND1-206ENST00000415361 ZXDCQ2QGD7 858 aaPredicted RBP7.27□□□□□ -1.25
CTNND1-206ENST00000415361 PQLC2Q6ZP29 291 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 OR5AU1Q8NGC0 362 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 OR4C13Q8NGP0 309 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 OPN4Q9UHM6 478 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 VWA8A3KMH1 1905 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 NPIPB11E5RHQ5 1161 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 SMIM10L1P0DMW3 83 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 OR10J1P30954 320 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 AWAT1Q58HT5 328 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 C10orf128Q5T292 105 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 SAMD13Q5VXD3 122 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 ABHD12Q8N2K0 398 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 OR2D3Q8NGH3 330 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 SMIM10Q96HG1 83 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 JMJD8Q96S16 334 aa7.27□□□□□ -1.25
CTNND1-206ENST00000415361 MRPL32Q9BYC8 188 aaKnown RBP7.27□□□□□ -1.25
CTNND1-206ENST00000415361 M0R3E3 92 aa7.26□□□□□ -1.25
CTNND1-206ENST00000415361 TCL1AP56279 114 aa7.26□□□□□ -1.25
CTNND1-206ENST00000415361 Q6ZT83 130 aa7.26□□□□□ -1.25
CTNND1-206ENST00000415361 KLF14Q8TD94 323 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-206ENST00000415361 PACRGQ96M98 296 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-206ENST00000415361 SH3BGRL3Q9H299 93 aa7.26□□□□□ -1.25
CTNND1-206ENST00000415361 IGLV1-36A0A0B4J1U3 117 aa7.26□□□□□ -1.25
CTNND1-206ENST00000415361 A0A1W2PPE3 182 aa7.26□□□□□ -1.25
CTNND1-206ENST00000415361 TMEM218A2RU14 115 aa7.26□□□□□ -1.25
CTNND1-206ENST00000415361 PRSS53Q2L4Q9 553 aa7.26□□□□□ -1.25
CTNND1-206ENST00000415361 C1orf100Q5SVJ3 147 aa7.26□□□□□ -1.25
CTNND1-206ENST00000415361 DCAF12L2Q5VW00 463 aa7.26□□□□□ -1.25
CTNND1-206ENST00000415361 CENPVQ7Z7K6 275 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-206ENST00000415361 ZNF488Q96MN9 340 aa7.26□□□□□ -1.25
CTNND1-206ENST00000415361 QTRT1Q9BXR0 403 aaKnown RBP7.26□□□□□ -1.25
CTNND1-206ENST00000415361 PTBP3O95758 552 aaKnown RBP7.26□□□□□ -1.25
CTNND1-206ENST00000415361 HSPE1P61604 102 aaKnown RBP7.26□□□□□ -1.25
CTNND1-206ENST00000415361 NRN1LQ496H8 165 aa7.26□□□□□ -1.25
CTNND1-206ENST00000415361 CHD5Q8TDI0 1954 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms