RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 LGALS7P47929 136 aa11.64□□□□□ -0.55
LIMS1-206ENST00000414829 OVCH2Q7RTZ1 564 aa11.64□□□□□ -0.55
LIMS1-206ENST00000414829 TMEM17Q86X19 198 aa11.64□□□□□ -0.55
LIMS1-206ENST00000414829 FAM71E2Q8N5Q1 922 aa11.64□□□□□ -0.55
LIMS1-206ENST00000414829 NPBQ8NG41 125 aa11.64□□□□□ -0.55
LIMS1-206ENST00000414829 OR6F1Q8NGZ6 308 aa11.64□□□□□ -0.55
LIMS1-206ENST00000414829 CHPT1Q8WUD6 406 aa11.64□□□□□ -0.55
LIMS1-206ENST00000414829 FLYWCH2Q96CP2 140 aaKnown RBP11.64□□□□□ -0.55
LIMS1-206ENST00000414829 TAS2R8Q9NYW2 309 aa11.64□□□□□ -0.55
LIMS1-206ENST00000414829 RBMX2Q9Y388 322 aaKnown RBP11.64□□□□□ -0.55
LIMS1-206ENST00000414829 M0QZ24 198 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 CTDSP2O14595 271 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 CREBL2O60519 120 aaPredicted RBP11.63□□□□□ -0.55
LIMS1-206ENST00000414829 NDUFA3O95167 84 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 IGHG2P01859 326 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 HLA-DRB1P01911 266 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 AADACP22760 399 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 HRH1P35367 487 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 KIR2DS2P43631 304 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 SLC35B1P78383 322 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 CATR1Q13166 79 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 IL18Q14116 193 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 PLGLAQ15195 96 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 C5orf64Q2M2E5 130 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 ZNF66Q6ZN08 573 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 KCTD9Q7L273 389 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 ZNF383Q8NA42 475 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 DRAXINQ8NBI3 349 aaPredicted RBP11.63□□□□□ -0.55
LIMS1-206ENST00000414829 OR4X2Q8NGF9 303 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 DGCR14Q96DF8 476 aaKnown RBP11.63□□□□□ -0.55
LIMS1-206ENST00000414829 DCUN1D5Q9BTE7 237 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 WNT10AQ9GZT5 417 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 NXF2Q9GZY0 626 aaKnown RBP11.63□□□□□ -0.55
LIMS1-206ENST00000414829 MIXL1Q9H2W2 232 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 MTFP1Q9UDX5 166 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 ZNF580Q9UK33 172 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 SIGLEC9Q9Y336 463 aa11.63□□□□□ -0.55
LIMS1-206ENST00000414829 RRHO14718 337 aa11.62□□□□□ -0.55
LIMS1-206ENST00000414829 FBXO24O75426 580 aa11.62□□□□□ -0.55
LIMS1-206ENST00000414829 OPN1MWP04001 364 aa11.62□□□□□ -0.55
LIMS1-206ENST00000414829 IFNA6P05013 189 aa11.62□□□□□ -0.55
LIMS1-206ENST00000414829 OPN1MW2P0DN77 364 aa11.62□□□□□ -0.55
LIMS1-206ENST00000414829 OPN1MW3P0DN78 364 aa11.62□□□□□ -0.55
LIMS1-206ENST00000414829 DUTP33316 252 aaKnown RBP11.62□□□□□ -0.55
LIMS1-206ENST00000414829 TSPAN5P62079 268 aa11.62□□□□□ -0.55
LIMS1-206ENST00000414829 RPS16P62249 146 aaKnown RBP11.62□□□□□ -0.55
LIMS1-206ENST00000414829 C2orf68Q2NKX9 166 aa11.62□□□□□ -0.55
LIMS1-206ENST00000414829 FBLN7Q53RD9 439 aa11.62□□□□□ -0.55
LIMS1-206ENST00000414829 RNASE10Q5GAN6 216 aaKnown RBP11.62□□□□□ -0.55
LIMS1-206ENST00000414829 VAX1Q5SQQ9 334 aa11.62□□□□□ -0.55
LIMS1-206ENST00000414829 LPCAT3Q6P1A2 487 aa11.62□□□□□ -0.55
LIMS1-206ENST00000414829 DHRS11Q6UWP2 260 aa11.62□□□□□ -0.55
LIMS1-206ENST00000414829 GLDNQ6ZMI3 551 aaPredicted RBP11.62□□□□□ -0.55
LIMS1-206ENST00000414829 CENPVQ7Z7K6 275 aaPredicted RBP11.62□□□□□ -0.55
LIMS1-206ENST00000414829 CMTM1Q8IZ96 169 aa11.62□□□□□ -0.55
LIMS1-206ENST00000414829 ARRDC1Q8N5I2 433 aa11.62□□□□□ -0.55
LIMS1-206ENST00000414829 COMMD1Q8N668 190 aa11.62□□□□□ -0.55
LIMS1-206ENST00000414829 OSR1Q8TAX0 266 aaPredicted RBP11.62□□□□□ -0.55
LIMS1-206ENST00000414829 SMIM4Q8WVI0 70 aa11.62□□□□□ -0.55
LIMS1-206ENST00000414829 SECTM1Q8WVN6 248 aa11.62□□□□□ -0.55
LIMS1-206ENST00000414829 HARBI1Q96MB7 349 aa11.62□□□□□ -0.55
LIMS1-206ENST00000414829 SLC5A7Q9GZV3 580 aa11.62□□□□□ -0.55
LIMS1-206ENST00000414829 PLSCR3Q9NRY6 295 aa11.62□□□□□ -0.55
LIMS1-206ENST00000414829 IGKV1D-13A0A0B4J2D9 117 aa11.61□□□□□ -0.55
LIMS1-206ENST00000414829 PROP1O75360 226 aa11.61□□□□□ -0.55
LIMS1-206ENST00000414829 PMP2P02689 132 aa11.61□□□□□ -0.55
LIMS1-206ENST00000414829 FCER2P06734 321 aa11.61□□□□□ -0.55
LIMS1-206ENST00000414829 CSF1P09603 554 aa11.61□□□□□ -0.55
LIMS1-206ENST00000414829 IGKV1-13P0DP09 117 aa11.61□□□□□ -0.55
LIMS1-206ENST00000414829 HLA-DMAP28067 261 aa11.61□□□□□ -0.55
LIMS1-206ENST00000414829 TAS2R19P59542 299 aa11.61□□□□□ -0.55
LIMS1-206ENST00000414829 FXYD4P59646 89 aa11.61□□□□□ -0.55
LIMS1-206ENST00000414829 LIN54Q6MZP7 749 aa11.61□□□□□ -0.55
LIMS1-206ENST00000414829 POC5Q8NA72 575 aa11.61□□□□□ -0.55
LIMS1-206ENST00000414829 OR52I2Q8NH67 350 aa11.61□□□□□ -0.55
LIMS1-206ENST00000414829 OR4S2Q8NH73 311 aa11.61□□□□□ -0.55
LIMS1-206ENST00000414829 CD300LFQ8TDQ1 290 aa11.61□□□□□ -0.55
LIMS1-206ENST00000414829 MOB3AQ96BX8 217 aa11.61□□□□□ -0.55
LIMS1-206ENST00000414829 ABHD1Q96SE0 405 aa11.61□□□□□ -0.55
LIMS1-206ENST00000414829 AIFM2Q9BRQ8 373 aa11.61□□□□□ -0.55
LIMS1-206ENST00000414829 ZNF2Q9BSG1 426 aaPredicted RBP11.61□□□□□ -0.55
LIMS1-206ENST00000414829 ANK2Q01484 3957 aa11.6□□□□□ -0.55
LIMS1-206ENST00000414829 PSMB11A5LHX3 300 aa11.6□□□□□ -0.55
LIMS1-206ENST00000414829 FABP12A6NFH5 140 aa11.6□□□□□ -0.55
LIMS1-206ENST00000414829 SHOXO15266 292 aa11.6□□□□□ -0.55
LIMS1-206ENST00000414829 IGKV1-16P04430 117 aa11.6□□□□□ -0.55
LIMS1-206ENST00000414829 VDAC1P21796 283 aa11.6□□□□□ -0.55
LIMS1-206ENST00000414829 PTBP1P26599 531 aaKnown RBP eCLIP11.6□□□□□ -0.55
LIMS1-206ENST00000414829 RFX2P48378 723 aa11.6□□□□□ -0.55
LIMS1-206ENST00000414829 F2RL1P55085 397 aa11.6□□□□□ -0.55
LIMS1-206ENST00000414829 MEF2DQ14814 521 aa11.6□□□□□ -0.55
LIMS1-206ENST00000414829 VMA21Q3ZAQ7 101 aa11.6□□□□□ -0.55
LIMS1-206ENST00000414829 TMEM177Q53S58 311 aa11.6□□□□□ -0.55
LIMS1-206ENST00000414829 TCTEX1D2Q8WW35 142 aa11.6□□□□□ -0.55
LIMS1-206ENST00000414829 DDB2Q92466 427 aa11.6□□□□□ -0.55
LIMS1-206ENST00000414829 J3QRK9 145 aa11.59□□□□□ -0.55
LIMS1-206ENST00000414829 GSTZ1O43708 216 aaPredicted RBP11.59□□□□□ -0.55
LIMS1-206ENST00000414829 IGF1P05019 195 aa11.59□□□□□ -0.55
LIMS1-206ENST00000414829 TNFSF8P32971 234 aa11.59□□□□□ -0.55
LIMS1-206ENST00000414829 ECI1P42126 302 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms