RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 HLA-DQA2P01906 255 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 ASAH2BP0C7U1 165 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 SRD5A1P18405 259 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 IL2RGP31785 369 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 PDLIM4P50479 330 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 SUPT4H1P63272 117 aaKnown RBP7.94□□□□□ -1.14
SNHG3-201ENST00000413987 IAH1Q2TAA2 248 aaPredicted RBP7.94□□□□□ -1.14
SNHG3-201ENST00000413987 WDR25Q64LD2 544 aaPredicted RBP7.94□□□□□ -1.14
SNHG3-201ENST00000413987 LINC00336Q6ZUF6 198 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 SLC22A24Q8N4F4 322 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 OR11H1Q8NG94 326 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 OR5H2Q8NGV7 314 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 OR11H2Q8NH07 326 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 OR2AE1Q8NHA4 323 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 FNDC9Q8TBE3 224 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 Q8WTZ3 238 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 HPSE2Q8WWQ2 592 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 AMELYQ99218 206 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 RTBDNQ9BSG5 229 aaPredicted RBP7.94□□□□□ -1.14
SNHG3-201ENST00000413987 KLRF1Q9NZS2 232 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 Q9UFV3 132 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 NSG2Q9Y328 171 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 A0A0A0MQY5 61 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 A0A0G2JMM0 328 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 TMEM269A0A1B0GVZ9 245 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 A0A1W2PPB8 328 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 A0A1W2PRS3 328 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 KIR3DP1A8MWS1 328 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 H3BQ15 152 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 J3QR06 171 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 SPRY2O43597 315 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 RBMXP38159 391 aaKnown RBP7.94□□□□□ -1.14
SNHG3-201ENST00000413987 DCAF10Q5QP82 559 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 Q6ZSR3 168 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 GCSAMQ8N6F7 178 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 OR51A2Q8NGJ7 313 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 OR5L2Q8NGL0 311 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 SSMEM1Q8WWF3 244 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 PSMF1Q92530 271 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 TVP23CQ96ET8 276 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 TSPAN32Q96QS1 320 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 ACTR3CQ9C0K3 210 aaPredicted RBP7.94□□□□□ -1.14
SNHG3-201ENST00000413987 R4GMQ9 66 aa7.94□□□□□ -1.14
SNHG3-201ENST00000413987 MPDZO75970 2070 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 IGKV1D-42A0A075B6H8 117 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 KIR2DL5BA0A0G2JN68 375 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 KIR2DL5BA0A0G2JPC4 375 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 SIRPB1O00241 398 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 CYB5BO43169 146 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 DLEU1O43261 78 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 GPR137BO60478 399 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 TRGC1P0CF51 173 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 CCL3P10147 92 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 GNB3P16520 340 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 GLIPR1P48060 266 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 QRFPP83859 136 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 RPL18Q07020 188 aaKnown RBP7.93□□□□□ -1.14
SNHG3-201ENST00000413987 TMEM42Q69YG0 159 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 LHFPL1Q86WI0 220 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 RPS19BP1Q86WX3 136 aaKnown RBP7.93□□□□□ -1.14
SNHG3-201ENST00000413987 KIR2DL5AQ8N109 375 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 KIR2DL5BQ8NHK3 375 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 C11orf40Q8WZ69 217 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 CMBLQ96DG6 245 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 NKX3-1Q99801 234 aaPredicted RBP7.93□□□□□ -1.14
SNHG3-201ENST00000413987 PRRG4Q9BZD6 226 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 SLC25A31Q9H0C2 315 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 C14orf166Q9Y224 244 aaKnown RBP7.93□□□□□ -1.14
SNHG3-201ENST00000413987 VDAC3Q9Y277 283 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 CHCHD2Q9Y6H1 151 aaPredicted RBP7.93□□□□□ -1.14
SNHG3-201ENST00000413987 ITPR1Q14643 2758 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 RELNP78509 3460 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 CPAMD8Q8IZJ3 1885 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 RBFOX3A6NFN3 312 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 H7C1C5 153 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 PHOX2AO14813 284 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 GCGP01275 180 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 TRGC2P03986 189 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 CXCL1P09341 107 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 AADACP22760 399 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 PTGDSP41222 190 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 RPS27P42677 84 aaKnown RBP7.93□□□□□ -1.14
SNHG3-201ENST00000413987 OR3A2P47893 321 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 FUT6P51993 359 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 TAS2R46P59540 309 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 LCN6P62502 163 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 MFGE8Q08431 387 aaPredicted RBP7.93□□□□□ -1.14
SNHG3-201ENST00000413987 SLC10A1Q14973 349 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 SLC35E3Q7Z769 313 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 ATG4DQ86TL0 474 aaPredicted RBP7.93□□□□□ -1.14
SNHG3-201ENST00000413987 OR14K1Q8NGZ2 314 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 SUCNR1Q9BXA5 334 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 HES7Q9BYE0 225 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 SMIM3Q9BZL3 60 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 PARP12Q9H0J9 701 aaKnown RBP7.93□□□□□ -1.14
SNHG3-201ENST00000413987 SLC7A11Q9UPY5 501 aa7.93□□□□□ -1.14
SNHG3-201ENST00000413987 MRPS18CQ9Y3D5 142 aaKnown RBP7.93□□□□□ -1.14
SNHG3-201ENST00000413987 LOC107986453A0A1B0GWG9 222 aa7.92□□□□□ -1.14
SNHG3-201ENST00000413987 MBPP02686 304 aaPredicted RBP7.92□□□□□ -1.14
SNHG3-201ENST00000413987 VSIG8P0DPA2 414 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms