RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 FAM103A1Q9BTL3 118 aaKnown RBP14.85□□□□□ -0.03
SF3A1-202ENST00000411423 GNB4Q9HAV0 340 aa14.85□□□□□ -0.03
SF3A1-202ENST00000411423 RHBDL2Q9NX52 303 aa14.85□□□□□ -0.03
SF3A1-202ENST00000411423 RBBP9O75884 186 aa14.84□□□□□ -0.03
SF3A1-202ENST00000411423 DIRAS3O95661 229 aa14.84□□□□□ -0.03
SF3A1-202ENST00000411423 IGLV2-23P01705 113 aa14.84□□□□□ -0.03
SF3A1-202ENST00000411423 TALDO1P37837 337 aa14.84□□□□□ -0.03
SF3A1-202ENST00000411423 IDNKQ5T6J7 187 aa14.84□□□□□ -0.03
SF3A1-202ENST00000411423 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.84□□□□□ -0.03
SF3A1-202ENST00000411423 CASTOR1Q8WTX7 329 aa14.84□□□□□ -0.03
SF3A1-202ENST00000411423 ST6GALNAC5Q9BVH7 336 aa14.84□□□□□ -0.03
SF3A1-202ENST00000411423 SLC35D1Q9NTN3 355 aa14.84□□□□□ -0.03
SF3A1-202ENST00000411423 METTL1Q9UBP6 276 aaKnown RBP14.84□□□□□ -0.03
SF3A1-202ENST00000411423 J3QRK9 145 aa14.83□□□□□ -0.04
SF3A1-202ENST00000411423 CA2P00918 260 aa14.83□□□□□ -0.04
SF3A1-202ENST00000411423 SLC6A1P30531 599 aa14.83□□□□□ -0.04
SF3A1-202ENST00000411423 ECSCRQ19T08 205 aa14.83□□□□□ -0.04
SF3A1-202ENST00000411423 ASPHD1Q5U4P2 390 aa14.83□□□□□ -0.04
SF3A1-202ENST00000411423 ZNF660Q6AZW8 331 aaPredicted RBP14.83□□□□□ -0.04
SF3A1-202ENST00000411423 PDPNQ86YL7 162 aa14.83□□□□□ -0.04
SF3A1-202ENST00000411423 ZNF491Q8N8L2 437 aa14.83□□□□□ -0.04
SF3A1-202ENST00000411423 RNF5Q99942 180 aa14.83□□□□□ -0.04
SF3A1-202ENST00000411423 NUBP2Q9Y5Y2 271 aa14.83□□□□□ -0.04
SF3A1-202ENST00000411423 A3GALT2U3KPV4 340 aa14.83□□□□□ -0.04
SF3A1-202ENST00000411423 LINC00473A8K010 186 aa14.82□□□□□ -0.04
SF3A1-202ENST00000411423 K7EIL1 84 aa14.82□□□□□ -0.04
SF3A1-202ENST00000411423 ARPC1BO15143 372 aaKnown RBP14.82□□□□□ -0.04
SF3A1-202ENST00000411423 SLC25A17O43808 307 aa14.82□□□□□ -0.04
SF3A1-202ENST00000411423 CRYGBP07316 175 aa14.82□□□□□ -0.04
SF3A1-202ENST00000411423 OR5H8P0DN80 308 aa14.82□□□□□ -0.04
SF3A1-202ENST00000411423 PTHLHP12272 177 aa14.82□□□□□ -0.04
SF3A1-202ENST00000411423 NFYAP23511 347 aaPredicted RBP14.82□□□□□ -0.04
SF3A1-202ENST00000411423 RPS16P62249 146 aaKnown RBP14.82□□□□□ -0.04
SF3A1-202ENST00000411423 EGFEM1PQ0D2K5 195 aa14.82□□□□□ -0.04
SF3A1-202ENST00000411423 PLGLAQ15195 96 aa14.82□□□□□ -0.04
SF3A1-202ENST00000411423 MRGPRG-AS1Q2M3A8 158 aa14.82□□□□□ -0.04
SF3A1-202ENST00000411423 REC114Q7Z4M0 266 aa14.82□□□□□ -0.04
SF3A1-202ENST00000411423 TSPAN14Q8NG11 270 aa14.82□□□□□ -0.04
SF3A1-202ENST00000411423 MRAPQ8TCY5 172 aa14.82□□□□□ -0.04
SF3A1-202ENST00000411423 C4orf3Q8WVX3 66 aa14.82□□□□□ -0.04
SF3A1-202ENST00000411423 DDB2Q92466 427 aa14.82□□□□□ -0.04
SF3A1-202ENST00000411423 GINS4Q9BRT9 223 aa14.82□□□□□ -0.04
SF3A1-202ENST00000411423 A0A1W2PN81 502 aa14.81□□□□□ -0.04
SF3A1-202ENST00000411423 WI2-2373I1.2A0A1W2PRP0 233 aa14.81□□□□□ -0.04
SF3A1-202ENST00000411423 SRRM4A7MD48 611 aaKnown RBP14.81□□□□□ -0.04
SF3A1-202ENST00000411423 I3L521 148 aa14.81□□□□□ -0.04
SF3A1-202ENST00000411423 IGLV2-14P01704 120 aa14.81□□□□□ -0.04
SF3A1-202ENST00000411423 CHRNA7P36544 502 aa14.81□□□□□ -0.04
SF3A1-202ENST00000411423 RAB9AP51151 201 aa14.81□□□□□ -0.04
SF3A1-202ENST00000411423 RAB25P57735 213 aa14.81□□□□□ -0.04
SF3A1-202ENST00000411423 LSM3P62310 102 aaKnown RBP14.81□□□□□ -0.04
SF3A1-202ENST00000411423 GNB1P62873 340 aa14.81□□□□□ -0.04
SF3A1-202ENST00000411423 PJVKQ0ZLH3 352 aa14.81□□□□□ -0.04
SF3A1-202ENST00000411423 FHL3Q13643 280 aa14.81□□□□□ -0.04
SF3A1-202ENST00000411423 ARL6IP1Q15041 203 aa14.81□□□□□ -0.04
SF3A1-202ENST00000411423 BVESQ8NE79 360 aa14.81□□□□□ -0.04
SF3A1-202ENST00000411423 FLYWCH2Q96CP2 140 aaKnown RBP14.81□□□□□ -0.04
SF3A1-202ENST00000411423 OR5B12Q96R08 314 aa14.81□□□□□ -0.04
SF3A1-202ENST00000411423 ALX4Q9H161 411 aaPredicted RBP14.81□□□□□ -0.04
SF3A1-202ENST00000411423 DNAH9Q9NYC9 4486 aa14.81□□□□□ -0.04
SF3A1-202ENST00000411423 TRAV18A0A075B6X5 111 aa14.8□□□□□ -0.04
SF3A1-202ENST00000411423 IGKV1D-13A0A0B4J2D9 117 aa14.8□□□□□ -0.04
SF3A1-202ENST00000411423 TRIM64CA6NLI5 447 aa14.8□□□□□ -0.04
SF3A1-202ENST00000411423 SPDEFO95238 335 aa14.8□□□□□ -0.04
SF3A1-202ENST00000411423 DUS4LO95620 317 aaKnown RBP14.8□□□□□ -0.04
SF3A1-202ENST00000411423 APOA2P02652 100 aa14.8□□□□□ -0.04
SF3A1-202ENST00000411423 IGKV1-13P0DP09 117 aa14.8□□□□□ -0.04
SF3A1-202ENST00000411423 DUTP33316 252 aaKnown RBP14.8□□□□□ -0.04
SF3A1-202ENST00000411423 RPS19P39019 145 aaKnown RBP14.8□□□□□ -0.04
SF3A1-202ENST00000411423 SCAND1P57086 179 aa14.8□□□□□ -0.04
SF3A1-202ENST00000411423 GNG2P59768 71 aa14.8□□□□□ -0.04
SF3A1-202ENST00000411423 ZNF562Q6V9R5 426 aa14.8□□□□□ -0.04
SF3A1-202ENST00000411423 GVQW1Q8N7I0 195 aa14.8□□□□□ -0.04
SF3A1-202ENST00000411423 TSNAXQ99598 290 aaKnown RBP14.8□□□□□ -0.04
SF3A1-202ENST00000411423 DCSTAMPQ9H295 470 aa14.8□□□□□ -0.04
SF3A1-202ENST00000411423 ETV7Q9Y603 341 aa14.8□□□□□ -0.04
SF3A1-202ENST00000411423 A0A087WXM4 84 aa14.79□□□□□ -0.04
SF3A1-202ENST00000411423 AIREO43918 545 aa14.79□□□□□ -0.04
SF3A1-202ENST00000411423 TNFAIP8O95379 198 aa14.79□□□□□ -0.04
SF3A1-202ENST00000411423 PPP1R27Q86WC6 154 aa14.79□□□□□ -0.04
SF3A1-202ENST00000411423 LFNGQ8NES3 379 aa14.79□□□□□ -0.04
SF3A1-202ENST00000411423 OR11H1Q8NG94 326 aa14.79□□□□□ -0.04
SF3A1-202ENST00000411423 UBE2E2Q96LR5 201 aa14.79□□□□□ -0.04
SF3A1-202ENST00000411423 SPATA2Q9UM82 520 aa14.79□□□□□ -0.04
SF3A1-202ENST00000411423 RBM7Q9Y580 266 aaKnown RBP14.79□□□□□ -0.04
SF3A1-202ENST00000411423 SCGNO76038 276 aa14.78□□□□□ -0.04
SF3A1-202ENST00000411423 HLA-DQB1P01920 261 aa14.78□□□□□ -0.04
SF3A1-202ENST00000411423 FCER2P06734 321 aa14.78□□□□□ -0.04
SF3A1-202ENST00000411423 LUMP51884 338 aaPredicted RBP14.78□□□□□ -0.04
SF3A1-202ENST00000411423 RPL30P62888 115 aaKnown RBP14.78□□□□□ -0.04
SF3A1-202ENST00000411423 TMEM177Q53S58 311 aa14.78□□□□□ -0.04
SF3A1-202ENST00000411423 CNIH2Q6PI25 160 aa14.78□□□□□ -0.04
SF3A1-202ENST00000411423 TMEM65Q6PI78 240 aa14.78□□□□□ -0.04
SF3A1-202ENST00000411423 ABHD5Q8WTS1 349 aa14.78□□□□□ -0.04
SF3A1-202ENST00000411423 HARBI1Q96MB7 349 aa14.78□□□□□ -0.04
SF3A1-202ENST00000411423 ANXA10Q9UJ72 324 aa14.78□□□□□ -0.04
SF3A1-202ENST00000411423 FOXA2Q9Y261 457 aaPredicted RBP14.78□□□□□ -0.04
SF3A1-202ENST00000411423 VSIG4Q9Y279 399 aa14.78□□□□□ -0.04
SF3A1-202ENST00000411423 PITPNAQ00169 270 aa14.77□□□□□ -0.05
SF3A1-202ENST00000411423 RUNX1Q01196 453 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms