RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 DDX39BQ13838 428 aaKnown RBP-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 RCN1Q15293 331 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 RBBP7Q16576 425 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 BCL7AQ4VC05 210 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 FAM98BQ52LJ0 330 aaKnown RBP-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 RNF219Q5W0B1 726 aaPredicted RBP-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 STEAP1BQ6NZ63 245 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 TRAT1Q6PIZ9 186 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 CCDC137Q6PK04 289 aaKnown RBP-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 FIGLAQ6QHK4 219 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 CCNYL1Q8N7R7 359 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 CEP112Q8N8E3 955 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR51A4Q8NGJ6 313 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR10J6PQ8NGY7 276 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 TERB2Q8NHR7 220 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 DCAKDQ8WVC6 231 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 FGF11Q92914 225 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 SPSB1Q96BD6 273 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 ULK4Q96C45 1275 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 PAGE5Q96GU1 130 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 SFRP2Q96HF1 295 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 CDK5RAP3Q96JB5 506 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 SERPINB12Q96P63 405 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR4C12Q96R67 309 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR52E6Q96RD3 313 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 KCNS3Q9BQ31 491 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 NACAP1Q9BZK3 213 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 RNF122Q9H9V4 155 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 SEPSECSQ9HD40 501 aaKnown RBP-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 OBP2BQ9NPH6 170 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 UQCC1Q9NVA1 299 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 COA4Q9NYJ1 87 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 PEMTQ9UBM1 199 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 TMCO1Q9UM00 188 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 SLC22A13Q9Y226 551 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 EXOSC1Q9Y3B2 195 aaKnown RBP-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 RPL36Q9Y3U8 105 aaKnown RBP-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 HLA-DRB4X5D2U9 266 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 ATP7BP35670 1465 aa-2.45□□□□□ -2.8
RNU4-88P-201ENST00000411220 EIF3AQ14152 1382 aaKnown RBP-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 USP54Q70EL1 1684 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 TRAV18A0A075B6X5 111 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 A0A0J9YY99 117 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 A0A1W2PPL8 197 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 ANKUB1A6NFN9 424 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 LRRC72A6NJI9 287 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 H3BQ06 376 aaPredicted RBP-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 L7N2F9 121 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 AIPO00170 330 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 CDIPTO14735 213 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 GABRDO14764 452 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 CLDN3O15551 220 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 TGOLN2O43493 480 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 MED7O43513 233 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 COX7A2P2O60397 106 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 ATP6AP2O75787 350 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 NDUFB2O95178 105 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 SNX4O95219 450 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 ASS1P00966 412 aaKnown RBP-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 NPYP01303 97 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 IGHV3-7P01780 117 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 FGGP02679 453 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 CRYGBP07316 175 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 CT45A8P0DMV1 189 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 CT45A9P0DMV2 189 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 TROVE2P10155 538 aaKnown RBP eCLIP-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 TNNT1P13805 278 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 TNNI3P19429 210 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 GJB2P29033 226 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 GABRA5P31644 462 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 GLRXP35754 106 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 PNPLA4P41247 253 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 SSR1P43307 286 aaKnown RBP-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 NDUFA8P51970 172 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 CDC42P60953 191 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 RAB14P61106 215 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 RPS16P62249 146 aaKnown RBP-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 ELP6Q0PNE2 266 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 RPA4Q13156 261 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 FGFBP1Q14512 234 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 TRMT5Q32P41 509 aaKnown RBP-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 TKFCQ3LXA3 575 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 CAVIN4Q5BKX8 364 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 CT45A2Q5DJT8 189 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 MFSD14CQ5VZR4 134 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR8G2PQ6IF36 304 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 C12orf54Q6X4T0 127 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 PLEKHG7Q6ZR37 379 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 Q6ZUT4 128 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 MTERF4Q7Z6M4 381 aaKnown RBP-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 PLCZ1Q86YW0 608 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 C1orf174Q8IYL3 243 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 CLYBLQ8N0X4 340 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 MINDY1Q8N5J2 469 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 ANKRD29Q8N6D5 301 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 CNTD1Q8N815 330 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 Q8N8P6 123 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 WFDC11Q8NEX6 87 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR4F17Q8NGA8 305 aa-2.46□□□□□ -2.8
RNU4-88P-201ENST00000411220 OR51A2Q8NGJ7 313 aa-2.46□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms