RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 MSL2Q9HCI7 577 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 TMEM106BQ9NUM4 274 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 LIN7CQ9NUP9 197 aaKnown RBP2.63□□□□□ -1.99
CUL3-204ENST00000409777 CACNG5Q9UF02 275 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 C19orf25Q9UFG5 118 aaPredicted RBP2.63□□□□□ -1.99
CUL3-204ENST00000409777 RP1P56715 2156 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 ARHGAP21Q5T5U3 1957 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 SHANK1Q9Y566 2161 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 TRBV20OR9-2A0A075B6H5 130 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 PRSS29PA6NIE9 313 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 OR5B21A6NL26 309 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 CDIPTO14735 213 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 CBR3O75828 277 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 HPRT1P00492 218 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 HLA-HP01893 362 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 CLEC3BP05452 202 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 GLI4P10075 376 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 CCL3P10147 92 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 FGF8P55075 233 aaPredicted RBP2.63□□□□□ -1.99
CUL3-204ENST00000409777 RANP62826 216 aaKnown RBP2.63□□□□□ -1.99
CUL3-204ENST00000409777 MORN2Q502X0 79 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 ZNF766Q5HY98 468 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 KCNIP4Q6PIL6 250 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 LCN15Q6UWW0 184 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 FAM90A1Q86YD7 464 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 DEFB123Q8N688 67 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 POM121L2Q96KW2 1035 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 SFXN3Q9BWM7 321 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 PHF7Q9BWX1 381 aaPredicted RBP2.63□□□□□ -1.99
CUL3-204ENST00000409777 RBM24Q9BX46 236 aaKnown RBP2.63□□□□□ -1.99
CUL3-204ENST00000409777 NPCDR1Q9BY65 106 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 ZNF703Q9H7S9 590 aaPredicted RBP2.63□□□□□ -1.99
CUL3-204ENST00000409777 DLL3Q9NYJ7 618 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 KCNIP1Q9NZI2 227 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 GAB2Q9UQC2 676 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 WDR83OSQ9Y284 106 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 X6R8D5 127 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 ALPK2Q86TB3 2170 aa2.63□□□□□ -1.99
CUL3-204ENST00000409777 KIAA2026Q5HYC2 2103 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 LNP1A1A4G5 178 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 LRRC30A6NM36 301 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 FNDC10F2Z333 226 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 K7EP13 123 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 SLC33A1O00400 549 aaPredicted RBP2.62□□□□□ -1.99
CUL3-204ENST00000409777 RAB29O14966 203 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 KLF7O75840 302 aaPredicted RBP2.62□□□□□ -1.99
CUL3-204ENST00000409777 OR7C1O76099 320 aaPredicted RBP2.62□□□□□ -1.99
CUL3-204ENST00000409777 LCATP04180 440 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 GUCA1AP43080 201 aaPredicted RBP2.62□□□□□ -1.99
CUL3-204ENST00000409777 OR3A1P47881 315 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 ERVS71-1P61550 626 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 RTP5Q14D33 572 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 ZNF146Q15072 292 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 ADIRFQ15847 76 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 FAM69BQ5VUD6 431 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 ZDHHC23Q8IYP9 409 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 TMEM256Q8N2U0 113 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 DRAM1Q8N682 238 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 OR52E5Q8NH55 327 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 RDH5Q92781 318 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 LHX4Q969G2 390 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 OR5B12Q96R08 314 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 TMEM204Q9BSN7 226 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 LPAR2Q9HBW0 351 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 IL36RNQ9UBH0 155 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 LSM4Q9Y4Z0 139 aaKnown RBP2.62□□□□□ -1.99
CUL3-204ENST00000409777 MPC1Q9Y5U8 109 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 CACNA1CQ13936 2221 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 IGHV3-15A0A0B4J1V0 119 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 TRAV39A0A0B4J263 110 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 IGHV5-10-1A0A0J9YXX1 117 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 A0A1W2PQM1 296 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 ZNF503-AS2A6NEH8 195 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 C15orf62A8K5M9 175 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 RNF212BA8MTL3 300 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 KLK10O43240 276 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 RBFOX2O43251 390 aaKnown RBP eCLIP2.62□□□□□ -1.99
CUL3-204ENST00000409777 SYNGR1O43759 233 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 MPDU1O75352 247 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 CLDN14O95500 239 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 STAG3L2P0CL84 134 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 STAG3L3P0CL85 134 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 TDGF1P13385 188 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 COL8A1P27658 744 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 CD82P27701 267 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 S100GP29377 79 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 TIMP3P35625 211 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 OPRK1P41145 380 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 CD69Q07108 199 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 ADIPOQQ15848 244 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 OR10J3Q5JRS4 329 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 SHISA6Q6ZSJ9 500 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 NUFIP2Q7Z417 695 aaKnown RBP2.62□□□□□ -1.99
CUL3-204ENST00000409777 P4HA3Q7Z4N8 544 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 PRSS58Q8IYP2 241 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 ZNF645Q8N7E2 425 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 ZNF114Q8NC26 417 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 OR2M7Q8NG81 312 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 OR56B2PQ8NGI1 322 aa2.62□□□□□ -1.99
CUL3-204ENST00000409777 OR1L1Q8NH94 360 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms