RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 OR10C1Q96KK4 312 aa9.53□□□□□ -0.88
SNX13-202ENST00000409604 ARV1Q9H2C2 271 aa9.53□□□□□ -0.88
SNX13-202ENST00000409604 GNG13Q9P2W3 67 aa9.53□□□□□ -0.88
SNX13-202ENST00000409604 GPR132Q9UNW8 380 aa9.53□□□□□ -0.88
SNX13-202ENST00000409604 TMED3Q9Y3Q3 217 aa9.53□□□□□ -0.88
SNX13-202ENST00000409604 CFAP46Q8IYW2 2715 aa9.53□□□□□ -0.88
SNX13-202ENST00000409604 USP34Q70CQ2 3546 aa9.53□□□□□ -0.88
SNX13-202ENST00000409604 TMEM8BA6NDV4 472 aa9.53□□□□□ -0.88
SNX13-202ENST00000409604 MT-CO2P00403 227 aa9.53□□□□□ -0.88
SNX13-202ENST00000409604 SLC25A6P12236 298 aa9.53□□□□□ -0.88
SNX13-202ENST00000409604 ADORA2A-AS1P86434 159 aa9.53□□□□□ -0.88
SNX13-202ENST00000409604 ZNF273Q14593 569 aa9.53□□□□□ -0.88
SNX13-202ENST00000409604 RPL7L1Q6DKI1 246 aaKnown RBP9.53□□□□□ -0.88
SNX13-202ENST00000409604 TRAT1Q6PIZ9 186 aa9.53□□□□□ -0.88
SNX13-202ENST00000409604 METTL1Q9UBP6 276 aaKnown RBP9.53□□□□□ -0.88
SNX13-202ENST00000409604 J3QR06 171 aa9.53□□□□□ -0.88
SNX13-202ENST00000409604 SYNGR2O43760 224 aa9.53□□□□□ -0.88
SNX13-202ENST00000409604 SCGB2A1O75556 95 aa9.53□□□□□ -0.88
SNX13-202ENST00000409604 CLEC3BP05452 202 aa9.53□□□□□ -0.88
SNX13-202ENST00000409604 RAB4BP61018 213 aa9.53□□□□□ -0.88
SNX13-202ENST00000409604 ZNF561Q8N587 486 aa9.53□□□□□ -0.88
SNX13-202ENST00000409604 FBXL15Q9H469 300 aa9.53□□□□□ -0.88
SNX13-202ENST00000409604 TRAV40A0A0B4J280 105 aa9.52□□□□□ -0.88
SNX13-202ENST00000409604 CCL1P22362 96 aa9.52□□□□□ -0.88
SNX13-202ENST00000409604 ZNF266Q14584 549 aa9.52□□□□□ -0.88
SNX13-202ENST00000409604 SIGIRRQ6IA17 410 aa9.52□□□□□ -0.88
SNX13-202ENST00000409604 IGF2-ASQ6U949 168 aa9.52□□□□□ -0.88
SNX13-202ENST00000409604 C20orf204Q6ZNR8 217 aa9.52□□□□□ -0.88
SNX13-202ENST00000409604 OR2C3Q8N628 320 aa9.52□□□□□ -0.88
SNX13-202ENST00000409604 OR52M1Q8NGK5 317 aa9.52□□□□□ -0.88
SNX13-202ENST00000409604 MRPL30Q8TCC3 161 aaKnown RBP9.52□□□□□ -0.88
SNX13-202ENST00000409604 DTD1Q8TEA8 209 aa9.52□□□□□ -0.88
SNX13-202ENST00000409604 FAM212BQ9NTI7 297 aaPredicted RBP9.52□□□□□ -0.88
SNX13-202ENST00000409604 C17orf98A8MV24 154 aa9.52□□□□□ -0.89
SNX13-202ENST00000409604 TMEM127O75204 238 aa9.52□□□□□ -0.89
SNX13-202ENST00000409604 IGHV3-23P01764 117 aa9.52□□□□□ -0.89
SNX13-202ENST00000409604 FGF8P55075 233 aaPredicted RBP9.52□□□□□ -0.89
SNX13-202ENST00000409604 ZNF596Q8TC21 504 aa9.52□□□□□ -0.89
SNX13-202ENST00000409604 FBXL17Q9UF56 701 aa9.52□□□□□ -0.89
SNX13-202ENST00000409604 HSF4Q9ULV5 492 aa9.52□□□□□ -0.89
SNX13-202ENST00000409604 KIAA1549Q9HCM3 1950 aa9.52□□□□□ -0.89
SNX13-202ENST00000409604 PF4V1P10720 104 aa9.52□□□□□ -0.89
SNX13-202ENST00000409604 TMEM33P57088 247 aa9.52□□□□□ -0.89
SNX13-202ENST00000409604 ZP1P60852 638 aa9.52□□□□□ -0.89
SNX13-202ENST00000409604 RUNX1Q01196 453 aa9.52□□□□□ -0.89
SNX13-202ENST00000409604 C2orf68Q2NKX9 166 aa9.52□□□□□ -0.89
SNX13-202ENST00000409604 TOR2AQ5JU69 321 aa9.52□□□□□ -0.89
SNX13-202ENST00000409604 SSX8Q7RTT4 187 aa9.52□□□□□ -0.89
SNX13-202ENST00000409604 SLC51BQ86UW2 128 aa9.52□□□□□ -0.89
SNX13-202ENST00000409604 LIME1Q9H400 295 aa9.52□□□□□ -0.89
SNX13-202ENST00000409604 GAMTQ14353 236 aa9.51□□□□□ -0.89
SNX13-202ENST00000409604 WDR86Q86TI4 376 aa9.51□□□□□ -0.89
SNX13-202ENST00000409604 TMEM219Q86XT9 240 aa9.51□□□□□ -0.89
SNX13-202ENST00000409604 FAM222BQ8WU58 562 aa9.51□□□□□ -0.89
SNX13-202ENST00000409604 TUBG2Q9NRH3 451 aa9.51□□□□□ -0.89
SNX13-202ENST00000409604 SRRM5B3KS81 715 aa9.51□□□□□ -0.89
SNX13-202ENST00000409604 J3QW42 95 aa9.51□□□□□ -0.89
SNX13-202ENST00000409604 GAPDHP04406 335 aaKnown RBP9.51□□□□□ -0.89
SNX13-202ENST00000409604 SNRNP70P08621 437 aaKnown RBP9.51□□□□□ -0.89
SNX13-202ENST00000409604 SLC38A11Q08AI6 406 aa9.51□□□□□ -0.89
SNX13-202ENST00000409604 ST6GAL2Q96JF0 529 aa9.51□□□□□ -0.89
SNX13-202ENST00000409604 TMEM56Q96MV1 263 aa9.51□□□□□ -0.89
SNX13-202ENST00000409604 CLEC7AQ9BXN2 247 aa9.51□□□□□ -0.89
SNX13-202ENST00000409604 OR5AC2Q9NZP5 309 aa9.51□□□□□ -0.89
SNX13-202ENST00000409604 AMMECR1Q9Y4X0 333 aaPredicted RBP9.51□□□□□ -0.89
SNX13-202ENST00000409604 IGHV3-49A0A0A0MS15 119 aa9.51□□□□□ -0.89
SNX13-202ENST00000409604 IGKV1D-17A0A075B6S4 117 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 CDK2AP1O14519 115 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 NDUFA2O43678 99 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 VAX1Q5SQQ9 334 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 C1QTNF12Q5T7M4 302 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 BAP18Q8IXM2 172 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 OR9G1Q8NH87 305 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 LILRB1Q8NHL6 650 aaPredicted RBP9.5□□□□□ -0.89
SNX13-202ENST00000409604 NEU4Q8WWR8 484 aaPredicted RBP9.5□□□□□ -0.89
SNX13-202ENST00000409604 RAB18Q9NP72 206 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 H2AFB1P0C5Y9 115 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 DYNLT3P51808 116 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 HIST1H3AP68431 136 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 HIST2H3PS2Q5TEC6 136 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 HIST2H3AQ71DI3 136 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 SAXO1Q8IYX7 474 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 BLNKQ8WV28 456 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 PATZ1Q9HBE1 687 aaKnown RBP9.5□□□□□ -0.89
SNX13-202ENST00000409604 OPN4Q9UHM6 478 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 ARPC4-TTLL3A0A0A6YYG9 625 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 MARCH11A6NNE9 402 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 TMEM178BH3BS89 294 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 J3KRW8 73 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 EXOSC2Q13868 293 aaKnown RBP9.5□□□□□ -0.89
SNX13-202ENST00000409604 WFDC3Q8IUB2 231 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 RNF138Q8WVD3 245 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 RSRP1Q9BUV0 290 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 MRPL20Q9BYC9 149 aaKnown RBP9.5□□□□□ -0.89
SNX13-202ENST00000409604 KBTBD11-OT1A0A1B0GTJ5 212 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 SRSF10O75494 262 aaKnown RBP9.5□□□□□ -0.89
SNX13-202ENST00000409604 IGKV1D-33P01593 117 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 IGKV1-33P01594 117 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 CCKARP32238 428 aa9.5□□□□□ -0.89
SNX13-202ENST00000409604 H2BFSP57053 126 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms