RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 RUNX1Q01196 453 aa15.27■□□□□ 0.04
TSPAN4-209ENST00000409543 FHL3Q13643 280 aa15.27■□□□□ 0.04
TSPAN4-209ENST00000409543 CDNFQ49AH0 187 aa15.27■□□□□ 0.04
TSPAN4-209ENST00000409543 ZNF562Q6V9R5 426 aa15.27■□□□□ 0.04
TSPAN4-209ENST00000409543 TCTEX1D1Q8N7M0 179 aa15.27■□□□□ 0.04
TSPAN4-209ENST00000409543 FLYWCH2Q96CP2 140 aaKnown RBP15.27■□□□□ 0.04
TSPAN4-209ENST00000409543 OR2D2Q9H210 308 aa15.27■□□□□ 0.04
TSPAN4-209ENST00000409543 SDHAF2Q9NX18 166 aa15.27■□□□□ 0.04
TSPAN4-209ENST00000409543 ZMAT5Q9UDW3 170 aaKnown RBP15.27■□□□□ 0.04
TSPAN4-209ENST00000409543 DAPK2Q9UIK4 370 aa15.27■□□□□ 0.04
TSPAN4-209ENST00000409543 SCGNO76038 276 aa15.26■□□□□ 0.03
TSPAN4-209ENST00000409543 TMEM267Q0VDI3 215 aaPredicted RBP15.26■□□□□ 0.03
TSPAN4-209ENST00000409543 ECSCRQ19T08 205 aa15.26■□□□□ 0.03
TSPAN4-209ENST00000409543 KCTD21Q4G0X4 260 aa15.26■□□□□ 0.03
TSPAN4-209ENST00000409543 HACD4Q5VWC8 232 aa15.26■□□□□ 0.03
TSPAN4-209ENST00000409543 SFXN4Q6P4A7 337 aa15.26■□□□□ 0.03
TSPAN4-209ENST00000409543 OR11H1Q8NG94 326 aa15.26■□□□□ 0.03
TSPAN4-209ENST00000409543 GINS4Q9BRT9 223 aa15.26■□□□□ 0.03
TSPAN4-209ENST00000409543 GNB4Q9HAV0 340 aa15.26■□□□□ 0.03
TSPAN4-209ENST00000409543 SLC35D1Q9NTN3 355 aa15.26■□□□□ 0.03
TSPAN4-209ENST00000409543 ELF5Q9UKW6 265 aaPredicted RBP15.26■□□□□ 0.03
TSPAN4-209ENST00000409543 FOXA2Q9Y261 457 aaPredicted RBP15.26■□□□□ 0.03
TSPAN4-209ENST00000409543 RRP15Q9Y3B9 282 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-209ENST00000409543 IGKV1D-8A0A087WSZ0 117 aa15.25■□□□□ 0.03
TSPAN4-209ENST00000409543 A0A1W2PN81 502 aa15.25■□□□□ 0.03
TSPAN4-209ENST00000409543 I3L521 148 aa15.25■□□□□ 0.03
TSPAN4-209ENST00000409543 SOX15O60248 233 aa15.25■□□□□ 0.03
TSPAN4-209ENST00000409543 SDC2P34741 201 aa15.25■□□□□ 0.03
TSPAN4-209ENST00000409543 CHRNA7P36544 502 aa15.25■□□□□ 0.03
TSPAN4-209ENST00000409543 PPP1R27Q86WC6 154 aa15.25■□□□□ 0.03
TSPAN4-209ENST00000409543 ABHD5Q8WTS1 349 aa15.25■□□□□ 0.03
TSPAN4-209ENST00000409543 CLCC1Q96S66 551 aa15.25■□□□□ 0.03
TSPAN4-209ENST00000409543 A3GALT2U3KPV4 340 aa15.25■□□□□ 0.03
TSPAN4-209ENST00000409543 CA2P00918 260 aa15.24■□□□□ 0.03
TSPAN4-209ENST00000409543 SNRPBP14678 240 aaKnown RBP15.24■□□□□ 0.03
TSPAN4-209ENST00000409543 LGALS7P47929 136 aa15.24■□□□□ 0.03
TSPAN4-209ENST00000409543 PITPNAQ00169 270 aa15.24■□□□□ 0.03
TSPAN4-209ENST00000409543 TAGLNQ01995 201 aaKnown RBP15.24■□□□□ 0.03
TSPAN4-209ENST00000409543 AKIRIN2Q53H80 203 aa15.24■□□□□ 0.03
TSPAN4-209ENST00000409543 H1FOOQ8IZA3 346 aaPredicted RBP15.24■□□□□ 0.03
TSPAN4-209ENST00000409543 OR1N2Q8NGR9 330 aa15.24■□□□□ 0.03
TSPAN4-209ENST00000409543 DCSTAMPQ9H295 470 aa15.24■□□□□ 0.03
TSPAN4-209ENST00000409543 RBM7Q9Y580 266 aaKnown RBP15.24■□□□□ 0.03
TSPAN4-209ENST00000409543 SLC25A17O43808 307 aa15.23■□□□□ 0.03
TSPAN4-209ENST00000409543 OR8U8P0C7N1 319 aa15.23■□□□□ 0.03
TSPAN4-209ENST00000409543 CD36P16671 472 aa15.23■□□□□ 0.03
TSPAN4-209ENST00000409543 SCAND1P57086 179 aa15.23■□□□□ 0.03
TSPAN4-209ENST00000409543 DGCR2P98153 550 aa15.23■□□□□ 0.03
TSPAN4-209ENST00000409543 ZNF616Q08AN1 781 aa15.23■□□□□ 0.03
TSPAN4-209ENST00000409543 NEDD8Q15843 81 aa15.23■□□□□ 0.03
TSPAN4-209ENST00000409543 ACTBL2Q562R1 376 aa15.23■□□□□ 0.03
TSPAN4-209ENST00000409543 DEFB121Q5J5C9 76 aa15.23■□□□□ 0.03
TSPAN4-209ENST00000409543 C9orf66Q5T8R8 295 aa15.23■□□□□ 0.03
TSPAN4-209ENST00000409543 PYHIN1Q6K0P9 492 aa15.23■□□□□ 0.03
TSPAN4-209ENST00000409543 LGALS14Q8TCE9 139 aa15.23■□□□□ 0.03
TSPAN4-209ENST00000409543 C5orf30Q96GV9 206 aa15.23■□□□□ 0.03
TSPAN4-209ENST00000409543 FAM103A1Q9BTL3 118 aaKnown RBP15.23■□□□□ 0.03
TSPAN4-209ENST00000409543 ST6GALNAC5Q9BVH7 336 aa15.23■□□□□ 0.03
TSPAN4-209ENST00000409543 LOC100506127A0A0U1RQW1 187 aa15.22■□□□□ 0.03
TSPAN4-209ENST00000409543 RAMP3O60896 148 aa15.22■□□□□ 0.03
TSPAN4-209ENST00000409543 IGLV2-23P01705 113 aa15.22■□□□□ 0.03
TSPAN4-209ENST00000409543 CTXN2P0C2S0 81 aa15.22■□□□□ 0.03
TSPAN4-209ENST00000409543 CLEC2LP0C7M8 214 aa15.22■□□□□ 0.03
TSPAN4-209ENST00000409543 RRASP10301 218 aa15.22■□□□□ 0.03
TSPAN4-209ENST00000409543 LUMP51884 338 aaPredicted RBP15.22■□□□□ 0.03
TSPAN4-209ENST00000409543 GNB1P62873 340 aa15.22■□□□□ 0.03
TSPAN4-209ENST00000409543 MXD1Q05195 221 aa15.22■□□□□ 0.03
TSPAN4-209ENST00000409543 CBX3Q13185 183 aa15.22■□□□□ 0.03
TSPAN4-209ENST00000409543 ZNF260Q3ZCT1 412 aa15.22■□□□□ 0.03
TSPAN4-209ENST00000409543 ASPHD1Q5U4P2 390 aa15.22■□□□□ 0.03
TSPAN4-209ENST00000409543 UNQ5815/PRO19632Q6UWF5 114 aa15.22■□□□□ 0.03
TSPAN4-209ENST00000409543 LFNGQ8NES3 379 aa15.22■□□□□ 0.03
TSPAN4-209ENST00000409543 ARPC1AQ92747 370 aa15.22■□□□□ 0.03
TSPAN4-209ENST00000409543 ADTRPQ96IZ2 230 aa15.22■□□□□ 0.03
TSPAN4-209ENST00000409543 OR5B12Q96R08 314 aa15.22■□□□□ 0.03
TSPAN4-209ENST00000409543 RNF167Q9H6Y7 350 aa15.22■□□□□ 0.03
TSPAN4-209ENST00000409543 TPSG1Q9NRR2 321 aa15.22■□□□□ 0.03
TSPAN4-209ENST00000409543 RHBDL2Q9NX52 303 aa15.22■□□□□ 0.03
TSPAN4-209ENST00000409543 TMEM235A6NFC5 223 aa15.21■□□□□ 0.03
TSPAN4-209ENST00000409543 SEC14L6B5MCN3 397 aa15.21■□□□□ 0.03
TSPAN4-209ENST00000409543 CRYGBP07316 175 aa15.21■□□□□ 0.03
TSPAN4-209ENST00000409543 FXYD3Q14802 87 aa15.21■□□□□ 0.03
TSPAN4-209ENST00000409543 RTL8BQ17RB0 113 aa15.21■□□□□ 0.03
TSPAN4-209ENST00000409543 TMEM177Q53S58 311 aa15.21■□□□□ 0.03
TSPAN4-209ENST00000409543 BVESQ8NE79 360 aa15.21■□□□□ 0.03
TSPAN4-209ENST00000409543 NUDCD2Q8WVJ2 157 aa15.21■□□□□ 0.03
TSPAN4-209ENST00000409543 ETV7Q9Y603 341 aa15.21■□□□□ 0.03
TSPAN4-209ENST00000409543 ARPC1BO15143 372 aaKnown RBP15.2■□□□□ 0.02
TSPAN4-209ENST00000409543 CD40LGP29965 261 aa15.2■□□□□ 0.02
TSPAN4-209ENST00000409543 DUTP33316 252 aaKnown RBP15.2■□□□□ 0.02
TSPAN4-209ENST00000409543 GNG2P59768 71 aa15.2■□□□□ 0.02
TSPAN4-209ENST00000409543 CASTOR1Q8WTX7 329 aa15.2■□□□□ 0.02
TSPAN4-209ENST00000409543 DDB2Q92466 427 aa15.2■□□□□ 0.02
TSPAN4-209ENST00000409543 HARBI1Q96MB7 349 aa15.2■□□□□ 0.02
TSPAN4-209ENST00000409543 SCOCQ9UIL1 159 aa15.2■□□□□ 0.02
TSPAN4-209ENST00000409543 SHOXO15266 292 aa15.19■□□□□ 0.02
TSPAN4-209ENST00000409543 SSX5O60225 188 aa15.19■□□□□ 0.02
TSPAN4-209ENST00000409543 TMEM127O75204 238 aa15.19■□□□□ 0.02
TSPAN4-209ENST00000409543 LGALS1P09382 135 aaKnown RBP15.19■□□□□ 0.02
TSPAN4-209ENST00000409543 SSBP2P81877 361 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms