RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 LINC00596Q86U02 117 aa10.34□□□□□ -0.75
CHRNA1-205ENST00000409542 FAM90A1Q86YD7 464 aa10.34□□□□□ -0.75
CHRNA1-205ENST00000409542 C11orf44Q8N8P7 122 aa10.34□□□□□ -0.75
CHRNA1-205ENST00000409542 CCDC71LQ8N9Z2 235 aa10.34□□□□□ -0.75
CHRNA1-205ENST00000409542 HIST1H2AAQ96QV6 131 aa10.34□□□□□ -0.75
CHRNA1-205ENST00000409542 RSRP1Q9BUV0 290 aa10.34□□□□□ -0.75
CHRNA1-205ENST00000409542 SLC5A7Q9GZV3 580 aa10.34□□□□□ -0.75
CHRNA1-205ENST00000409542 ZNRD1Q9P1U0 126 aa10.34□□□□□ -0.75
CHRNA1-205ENST00000409542 MPC1Q9Y5U8 109 aa10.34□□□□□ -0.75
CHRNA1-205ENST00000409542 RAB19A4D1S5 217 aa10.33□□□□□ -0.76
CHRNA1-205ENST00000409542 MSGN1A6NI15 193 aa10.33□□□□□ -0.76
CHRNA1-205ENST00000409542 OR5B21A6NL26 309 aa10.33□□□□□ -0.76
CHRNA1-205ENST00000409542 CD300LBA8K4G0 201 aa10.33□□□□□ -0.76
CHRNA1-205ENST00000409542 OR7C1O76099 320 aaPredicted RBP10.33□□□□□ -0.76
CHRNA1-205ENST00000409542 HERV-K104P61576 105 aa10.33□□□□□ -0.76
CHRNA1-205ENST00000409542 SMCO1Q147U7 214 aa10.33□□□□□ -0.76
CHRNA1-205ENST00000409542 LIAT1Q6ZQX7 453 aa10.33□□□□□ -0.76
CHRNA1-205ENST00000409542 FAM185AQ8N0U4 392 aa10.33□□□□□ -0.76
CHRNA1-205ENST00000409542 PNKDQ8N490 385 aa10.33□□□□□ -0.76
CHRNA1-205ENST00000409542 GCSAMQ8N6F7 178 aa10.33□□□□□ -0.76
CHRNA1-205ENST00000409542 PPP1R35Q8TAP8 253 aa10.33□□□□□ -0.76
CHRNA1-205ENST00000409542 RTN4IP1Q8WWV3 396 aaPredicted RBP10.33□□□□□ -0.76
CHRNA1-205ENST00000409542 TOMM40LQ969M1 308 aa10.33□□□□□ -0.76
CHRNA1-205ENST00000409542 SLAMF9Q96A28 289 aa10.33□□□□□ -0.76
CHRNA1-205ENST00000409542 SIRT7Q9NRC8 400 aa10.33□□□□□ -0.76
CHRNA1-205ENST00000409542 VPREB3Q9UKI3 123 aa10.33□□□□□ -0.76
CHRNA1-205ENST00000409542 OOEPA6NGQ2 149 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 ANKRD30BLA7E2S9 258 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 ZNF732B4DXR9 585 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 RNASEK-C17orf49H0YIS7 233 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 DEDDO75618 318 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 PTBP3O95758 552 aaKnown RBP10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 NAPSAO96009 420 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 GLAP06280 429 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 HAAOP46952 286 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 GPM6AP51674 278 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 S100A10P60903 97 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 KLRD1Q13241 179 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 IL13RA2Q14627 380 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 HERPUD1Q15011 391 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 OR8G1Q15617 311 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 OXLD1Q5BKU9 147 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 C1orf122Q6ZSJ8 110 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 LGI3Q8N145 548 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 MRAPQ8TCY5 172 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 RNF141Q8WVD5 230 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 OR5P3Q8WZ94 311 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 MARC2Q969Z3 335 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 PKIBQ9C010 78 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 RHOFQ9HBH0 211 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 SPACA1Q9HBV2 294 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 Q9N2K0 584 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 SLC2A9Q9NRM0 540 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 ZFP57Q9NU63 452 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 TAS2R3Q9NYW6 316 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 GSKIPQ9P0R6 139 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 RPUSD1Q9UJJ7 312 aaKnown RBP10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 FAM96BQ9Y3D0 163 aa10.32□□□□□ -0.76
CHRNA1-205ENST00000409542 NOTCH3Q9UM47 2321 aa10.31□□□□□ -0.76
CHRNA1-205ENST00000409542 TRBV6-6A0A0A6YYG2 114 aa10.31□□□□□ -0.76
CHRNA1-205ENST00000409542 TRAV38-1A0A0B4J264 116 aa10.31□□□□□ -0.76
CHRNA1-205ENST00000409542 TEX46H3BTG2 121 aa10.31□□□□□ -0.76
CHRNA1-205ENST00000409542 GPR37O15354 613 aa10.31□□□□□ -0.76
CHRNA1-205ENST00000409542 GAPDHP04406 335 aaKnown RBP10.31□□□□□ -0.76
CHRNA1-205ENST00000409542 AADACP22760 399 aa10.31□□□□□ -0.76
CHRNA1-205ENST00000409542 FXYD4P59646 89 aa10.31□□□□□ -0.76
CHRNA1-205ENST00000409542 RND3P61587 244 aa10.31□□□□□ -0.76
CHRNA1-205ENST00000409542 SRPXP78539 464 aa10.31□□□□□ -0.76
CHRNA1-205ENST00000409542 EIF5AL1Q6IS14 154 aaKnown RBP10.31□□□□□ -0.76
CHRNA1-205ENST00000409542 LYG1Q8N1E2 194 aa10.31□□□□□ -0.76
CHRNA1-205ENST00000409542 Q8N7P7 452 aa10.31□□□□□ -0.76
CHRNA1-205ENST00000409542 LY6G5BQ8NDX9 201 aa10.31□□□□□ -0.76
CHRNA1-205ENST00000409542 ADAT1Q9BUB4 502 aaKnown RBP10.31□□□□□ -0.76
CHRNA1-205ENST00000409542 RIMS4Q9H426 269 aaPredicted RBP10.31□□□□□ -0.76
CHRNA1-205ENST00000409542 PLEKHA2Q9HB19 425 aa10.31□□□□□ -0.76
CHRNA1-205ENST00000409542 COL7A1Q02388 2944 aa10.31□□□□□ -0.76
CHRNA1-205ENST00000409542 K7EPK0 472 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 BET1O15155 118 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 DIRAS3O95661 229 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 LHBP01229 141 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 PPYP01298 95 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 GRPP07492 148 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 FBP1P09467 338 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 CTXN2P0C2S0 81 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 OR5AC1P0C628 307 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 KIR2DS4P43632 304 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 GNG3P63215 75 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 IL24Q13007 206 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 KIR2DS1Q14954 304 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 ZNF573Q86YE8 665 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 C11orf53Q8IXP5 236 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 FAM71E2Q8N5Q1 922 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 OR1S2Q8NGQ3 325 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 TNFRSF14Q92956 283 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 SAT2Q96F10 170 aaPredicted RBP10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 CCL13Q99616 98 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 IFT22Q9H7X7 185 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 MTCH1Q9NZJ7 389 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 ONECUT1Q9UBC0 465 aa10.3□□□□□ -0.76
CHRNA1-205ENST00000409542 KPTNQ9Y664 436 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms