RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 ZNF586Q9NXT0 402 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 PGLYRP1O75594 196 aaPredicted RBP14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 SULT1A2P50226 295 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 NR2C2APQ86WQ0 139 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 TPRX1Q8N7U7 411 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 OR2T10Q8NGZ9 312 aa14.31□□□□□ -0.12
PCDHA13-202ENST00000409494 CCL1P22362 96 aa14.3□□□□□ -0.12
PCDHA13-202ENST00000409494 PSG7Q13046 419 aa14.3□□□□□ -0.12
PCDHA13-202ENST00000409494 ANKRD55Q3KP44 614 aa14.3□□□□□ -0.12
PCDHA13-202ENST00000409494 PRR27Q6MZM9 219 aa14.3□□□□□ -0.12
PCDHA13-202ENST00000409494 PUSL1Q8N0Z8 303 aaKnown RBP14.3□□□□□ -0.12
PCDHA13-202ENST00000409494 OR4X1Q8NH49 305 aa14.3□□□□□ -0.12
PCDHA13-202ENST00000409494 TMEM37Q8WXS4 190 aa14.3□□□□□ -0.12
PCDHA13-202ENST00000409494 RSRP1Q9BUV0 290 aa14.3□□□□□ -0.12
PCDHA13-202ENST00000409494 NBL1P41271 181 aa14.3□□□□□ -0.12
PCDHA13-202ENST00000409494 FAM78BQ5VT40 261 aa14.3□□□□□ -0.12
PCDHA13-202ENST00000409494 RGP1Q92546 391 aaPredicted RBP14.3□□□□□ -0.12
PCDHA13-202ENST00000409494 METTL1Q9UBP6 276 aaKnown RBP14.3□□□□□ -0.12
PCDHA13-202ENST00000409494 PI4KAP42356 2102 aa14.3□□□□□ -0.12
PCDHA13-202ENST00000409494 GATCO43716 136 aaKnown RBP14.3□□□□□ -0.12
PCDHA13-202ENST00000409494 CXorf1O96002 111 aa14.3□□□□□ -0.12
PCDHA13-202ENST00000409494 DSCR9P59020 149 aa14.3□□□□□ -0.12
PCDHA13-202ENST00000409494 PLSCR2Q9NRY7 297 aa14.3□□□□□ -0.12
PCDHA13-202ENST00000409494 SMIM6P0DI80 62 aa14.3□□□□□ -0.12
PCDHA13-202ENST00000409494 PAX6P26367 422 aa14.3□□□□□ -0.12
PCDHA13-202ENST00000409494 SIGLECL1Q8N7X8 197 aa14.3□□□□□ -0.12
PCDHA13-202ENST00000409494 SLC35E3Q7Z769 313 aa14.29□□□□□ -0.12
PCDHA13-202ENST00000409494 DYNLRB2Q8TF09 96 aa14.29□□□□□ -0.12
PCDHA13-202ENST00000409494 TMEM208Q9BTX3 173 aa14.29□□□□□ -0.12
PCDHA13-202ENST00000409494 HYPMO75409 117 aa14.29□□□□□ -0.12
PCDHA13-202ENST00000409494 F12P00748 615 aaPredicted RBP14.29□□□□□ -0.12
PCDHA13-202ENST00000409494 IGHG3P01860 377 aa14.29□□□□□ -0.12
PCDHA13-202ENST00000409494 FGF8P55075 233 aaPredicted RBP14.29□□□□□ -0.12
PCDHA13-202ENST00000409494 RPS11P62280 158 aaKnown RBP eCLIP14.29□□□□□ -0.12
PCDHA13-202ENST00000409494 MYPOPQ86VE0 399 aaPredicted RBP14.29□□□□□ -0.12
PCDHA13-202ENST00000409494 SLC25A22Q9H936 323 aa14.29□□□□□ -0.12
PCDHA13-202ENST00000409494 SEC14L6B5MCN3 397 aa14.29□□□□□ -0.12
PCDHA13-202ENST00000409494 NAT1P18440 290 aa14.29□□□□□ -0.12
PCDHA13-202ENST00000409494 ECSCRQ19T08 205 aa14.29□□□□□ -0.12
PCDHA13-202ENST00000409494 VAX2Q9UIW0 290 aa14.29□□□□□ -0.12
PCDHA13-202ENST00000409494 PDE6DO43924 150 aa14.29□□□□□ -0.12
PCDHA13-202ENST00000409494 HIST1H1BP16401 226 aaKnown RBP14.29□□□□□ -0.12
PCDHA13-202ENST00000409494 CD1BP29016 333 aa14.29□□□□□ -0.12
PCDHA13-202ENST00000409494 SPINK9Q5DT21 86 aa14.29□□□□□ -0.12
PCDHA13-202ENST00000409494 OSR1Q8TAX0 266 aaPredicted RBP14.29□□□□□ -0.12
PCDHA13-202ENST00000409494 FAM168AQ92567 244 aa14.29□□□□□ -0.12
PCDHA13-202ENST00000409494 COL4A6Q14031 1691 aa14.28□□□□□ -0.12
PCDHA13-202ENST00000409494 STARD4Q96DR4 205 aa14.28□□□□□ -0.12
PCDHA13-202ENST00000409494 A0A1B0GTI1 187 aa14.28□□□□□ -0.12
PCDHA13-202ENST00000409494 SERTM2A0A1B0GWG4 89 aa14.28□□□□□ -0.12
PCDHA13-202ENST00000409494 ZNF98A6NK75 572 aa14.28□□□□□ -0.12
PCDHA13-202ENST00000409494 ARF6P62330 175 aa14.28□□□□□ -0.12
PCDHA13-202ENST00000409494 RCC2Q9P258 522 aaKnown RBP14.28□□□□□ -0.12
PCDHA13-202ENST00000409494 DPM3Q9P2X0 92 aa14.28□□□□□ -0.12
PCDHA13-202ENST00000409494 HILPDAQ9Y5L2 63 aa14.28□□□□□ -0.12
PCDHA13-202ENST00000409494 IGKV1D-43A0A0B4J1Z2 117 aa14.28□□□□□ -0.12
PCDHA13-202ENST00000409494 FAM74A7A6NL05 159 aa14.28□□□□□ -0.12
PCDHA13-202ENST00000409494 KBTBD11O94819 623 aa14.28□□□□□ -0.12
PCDHA13-202ENST00000409494 P2RY4P51582 365 aa14.28□□□□□ -0.12
PCDHA13-202ENST00000409494 ARTNQ5T4W7 220 aa14.28□□□□□ -0.12
PCDHA13-202ENST00000409494 SPRR3Q9UBC9 169 aa14.28□□□□□ -0.12
PCDHA13-202ENST00000409494 SDK2Q58EX2 2172 aa14.28□□□□□ -0.12
PCDHA13-202ENST00000409494 B4DEV8 164 aa14.27□□□□□ -0.12
PCDHA13-202ENST00000409494 NTF3P20783 257 aa14.27□□□□□ -0.12
PCDHA13-202ENST00000409494 ATP6V0CP27449 155 aa14.27□□□□□ -0.12
PCDHA13-202ENST00000409494 REG1BP48304 166 aa14.27□□□□□ -0.12
PCDHA13-202ENST00000409494 OR4A5Q8NH83 315 aa14.27□□□□□ -0.12
PCDHA13-202ENST00000409494 C19orf24Q9BVV8 132 aa14.27□□□□□ -0.12
PCDHA13-202ENST00000409494 HIGD1AQ9Y241 93 aa14.27□□□□□ -0.12
PCDHA13-202ENST00000409494 YTHDF2Q9Y5A9 579 aaKnown RBP14.27□□□□□ -0.12
PCDHA13-202ENST00000409494 FGFRL1Q8N441 504 aa14.27□□□□□ -0.12
PCDHA13-202ENST00000409494 TRAPPC1Q9Y5R8 145 aa14.27□□□□□ -0.12
PCDHA13-202ENST00000409494 LINC00312Q9Y6C7 94 aa14.27□□□□□ -0.12
PCDHA13-202ENST00000409494 DEDDO75618 318 aa14.27□□□□□ -0.13
PCDHA13-202ENST00000409494 GLIPR1P48060 266 aa14.27□□□□□ -0.13
PCDHA13-202ENST00000409494 WDR73Q6P4I2 378 aa14.27□□□□□ -0.13
PCDHA13-202ENST00000409494 AQP10Q96PS8 301 aa14.27□□□□□ -0.13
PCDHA13-202ENST00000409494 ICE1Q9Y2F5 2266 aa14.27□□□□□ -0.13
PCDHA13-202ENST00000409494 ADAM11O75078 769 aa14.27□□□□□ -0.13
PCDHA13-202ENST00000409494 NPBWR2P48146 333 aa14.27□□□□□ -0.13
PCDHA13-202ENST00000409494 BSXQ3C1V8 233 aa14.27□□□□□ -0.13
PCDHA13-202ENST00000409494 TMEM255AQ5JRV8 349 aa14.27□□□□□ -0.13
PCDHA13-202ENST00000409494 NCMAPQ5T1S8 102 aa14.27□□□□□ -0.13
PCDHA13-202ENST00000409494 A0A1W2PPE3 182 aa14.26□□□□□ -0.13
PCDHA13-202ENST00000409494 PQLC2LA1A4F0 135 aa14.26□□□□□ -0.13
PCDHA13-202ENST00000409494 SIGLEC5O15389 551 aa14.26□□□□□ -0.13
PCDHA13-202ENST00000409494 CD8AP01732 235 aa14.26□□□□□ -0.13
PCDHA13-202ENST00000409494 MFAP4P55083 255 aa14.26□□□□□ -0.13
PCDHA13-202ENST00000409494 DLK1P80370 383 aa14.26□□□□□ -0.13
PCDHA13-202ENST00000409494 EFNB1P98172 346 aa14.26□□□□□ -0.13
PCDHA13-202ENST00000409494 ST6GALNAC3Q8NDV1 305 aa14.26□□□□□ -0.13
PCDHA13-202ENST00000409494 SSBP3Q9BWW4 388 aaPredicted RBP14.26□□□□□ -0.13
PCDHA13-202ENST00000409494 NAT8Q9UHE5 227 aa14.26□□□□□ -0.13
PCDHA13-202ENST00000409494 SPTBN2O15020 2390 aa14.26□□□□□ -0.13
PCDHA13-202ENST00000409494 H3BQ15 152 aa14.26□□□□□ -0.13
PCDHA13-202ENST00000409494 WBP1Q96G27 269 aa14.26□□□□□ -0.13
PCDHA13-202ENST00000409494 DOK5Q9P104 306 aa14.26□□□□□ -0.13
PCDHA13-202ENST00000409494 BTCP35070 178 aa14.26□□□□□ -0.13
PCDHA13-202ENST00000409494 RND3P61587 244 aa14.26□□□□□ -0.13
PCDHA13-202ENST00000409494 GGNQ86UU5 652 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms