RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 HIST1H2BKO60814 126 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 HIST1H2BJP06899 126 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 DEFA4P12838 97 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 WT1P19544 449 aaPredicted RBP13.82□□□□□ -0.2
COL23A1-202ENST00000407622 HIST1H2BOP23527 126 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 HIST1H2BBP33778 126 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 HIST1H2BDP58876 126 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 HIST1H2BCP62807 126 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 HIST2H2BEQ16778 126 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 LTC4SQ16873 150 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.82□□□□□ -0.2
COL23A1-202ENST00000407622 ZNF610Q8N9Z0 462 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 HIST1H2BHQ93079 126 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 LHX4Q969G2 390 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 HIST1H2BNQ99877 126 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 HIST1H2BMQ99879 126 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 VAX2Q9UIW0 290 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 ZNF737O75373 536 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 COX5AP20674 150 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 CD81P60033 236 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 Q3ZCU0 254 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 MRGPRGQ86SM5 289 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 ZBTB34Q8NCN2 500 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 GATAD1Q8WUU5 269 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 NINJ1Q92982 152 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 TCEAL7Q9BRU2 100 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 SLC39A9Q9NUM3 307 aa13.82□□□□□ -0.2
COL23A1-202ENST00000407622 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.81□□□□□ -0.2
COL23A1-202ENST00000407622 WDR25Q64LD2 544 aaPredicted RBP13.81□□□□□ -0.2
COL23A1-202ENST00000407622 CD177Q8N6Q3 437 aa13.81□□□□□ -0.2
COL23A1-202ENST00000407622 PINX1Q96BK5 328 aaKnown RBP13.81□□□□□ -0.2
COL23A1-202ENST00000407622 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.81□□□□□ -0.2
COL23A1-202ENST00000407622 MIOXQ9UGB7 285 aa13.81□□□□□ -0.2
COL23A1-202ENST00000407622 PSG11Q9UQ72 335 aa13.81□□□□□ -0.2
COL23A1-202ENST00000407622 HOXC12P31275 282 aa13.81□□□□□ -0.2
COL23A1-202ENST00000407622 CATR1Q13166 79 aa13.81□□□□□ -0.2
COL23A1-202ENST00000407622 MSMO1Q15800 293 aa13.81□□□□□ -0.2
COL23A1-202ENST00000407622 ACSF3Q4G176 576 aaPredicted RBP13.81□□□□□ -0.2
COL23A1-202ENST00000407622 GFI1BQ5VTD9 330 aa13.81□□□□□ -0.2
COL23A1-202ENST00000407622 DTD1Q8TEA8 209 aa13.81□□□□□ -0.2
COL23A1-202ENST00000407622 HCFC1P51610 2035 aa13.81□□□□□ -0.2
COL23A1-202ENST00000407622 B4DEV8 164 aa13.8□□□□□ -0.2
COL23A1-202ENST00000407622 CYB5R3P00387 301 aaPredicted RBP13.8□□□□□ -0.2
COL23A1-202ENST00000407622 MDKP21741 143 aaPredicted RBP13.8□□□□□ -0.2
COL23A1-202ENST00000407622 FGF7P21781 194 aa13.8□□□□□ -0.2
COL23A1-202ENST00000407622 EDDM3AQ14507 147 aa13.8□□□□□ -0.2
COL23A1-202ENST00000407622 PRR7Q8TB68 274 aa13.8□□□□□ -0.2
COL23A1-202ENST00000407622 P2RX4Q99571 388 aa13.8□□□□□ -0.2
COL23A1-202ENST00000407622 TOLLIPQ9H0E2 274 aa13.8□□□□□ -0.2
COL23A1-202ENST00000407622 EGR1P18146 543 aa13.8□□□□□ -0.2
COL23A1-202ENST00000407622 MSMPQ1L6U9 139 aa13.8□□□□□ -0.2
COL23A1-202ENST00000407622 LURAP1LQ8IV03 231 aa13.8□□□□□ -0.2
COL23A1-202ENST00000407622 FAM210BQ96KR6 192 aa13.8□□□□□ -0.2
COL23A1-202ENST00000407622 AGMATQ9BSE5 352 aa13.8□□□□□ -0.2
COL23A1-202ENST00000407622 TMEM147Q9BVK8 224 aa13.8□□□□□ -0.2
COL23A1-202ENST00000407622 TIMM9Q9Y5J7 89 aa13.8□□□□□ -0.2
COL23A1-202ENST00000407622 PROP1O75360 226 aa13.79□□□□□ -0.2
COL23A1-202ENST00000407622 RBMXL2O75526 392 aaKnown RBP13.79□□□□□ -0.2
COL23A1-202ENST00000407622 CLDN14O95500 239 aa13.79□□□□□ -0.2
COL23A1-202ENST00000407622 KITLGP21583 273 aa13.79□□□□□ -0.2
COL23A1-202ENST00000407622 CDX1P47902 265 aaPredicted RBP13.79□□□□□ -0.2
COL23A1-202ENST00000407622 RND2P52198 227 aa13.79□□□□□ -0.2
COL23A1-202ENST00000407622 PNRC1Q12796 327 aaPredicted RBP13.79□□□□□ -0.2
COL23A1-202ENST00000407622 CDPF1Q6NVV7 123 aa13.79□□□□□ -0.2
COL23A1-202ENST00000407622 H2BFWTQ7Z2G1 175 aa13.79□□□□□ -0.2
COL23A1-202ENST00000407622 CENPVQ7Z7K6 275 aaPredicted RBP13.79□□□□□ -0.2
COL23A1-202ENST00000407622 ABHD5Q8WTS1 349 aa13.79□□□□□ -0.2
COL23A1-202ENST00000407622 EDARADDQ8WWZ3 215 aa13.79□□□□□ -0.2
COL23A1-202ENST00000407622 OPN3Q9H1Y3 402 aaPredicted RBP13.79□□□□□ -0.2
COL23A1-202ENST00000407622 IGHV2OR16-5A0A0B4J2B6 119 aa13.79□□□□□ -0.2
COL23A1-202ENST00000407622 IGHV1-18A0A0C4DH31 117 aa13.79□□□□□ -0.2
COL23A1-202ENST00000407622 C15orf65H3BRN8 121 aa13.79□□□□□ -0.2
COL23A1-202ENST00000407622 IGHV3-13P01766 116 aa13.79□□□□□ -0.2
COL23A1-202ENST00000407622 IGHV3-7P01780 117 aa13.79□□□□□ -0.2
COL23A1-202ENST00000407622 PDZD11Q5EBL8 140 aa13.79□□□□□ -0.2
COL23A1-202ENST00000407622 NCR3LG1Q68D85 454 aa13.79□□□□□ -0.2
COL23A1-202ENST00000407622 LRRC29Q8WV35 223 aa13.79□□□□□ -0.2
COL23A1-202ENST00000407622 FRZBQ92765 325 aa13.79□□□□□ -0.2
COL23A1-202ENST00000407622 GGACTQ9BVM4 153 aa13.79□□□□□ -0.2
COL23A1-202ENST00000407622 OR51M1Q9H341 326 aa13.79□□□□□ -0.2
COL23A1-202ENST00000407622 CLDN34H7C241 214 aa13.78□□□□□ -0.2
COL23A1-202ENST00000407622 RAB29O14966 203 aa13.78□□□□□ -0.2
COL23A1-202ENST00000407622 MEF2BQ02080 365 aaPredicted RBP13.78□□□□□ -0.2
COL23A1-202ENST00000407622 C4orf17Q53FE4 359 aa13.78□□□□□ -0.2
COL23A1-202ENST00000407622 SPRNQ5BIV9 151 aa13.78□□□□□ -0.2
COL23A1-202ENST00000407622 FFAR4Q5NUL3 377 aa13.78□□□□□ -0.2
COL23A1-202ENST00000407622 OR10P1Q8NGE3 313 aa13.78□□□□□ -0.2
COL23A1-202ENST00000407622 OR10G9Q8NGN4 311 aa13.78□□□□□ -0.2
COL23A1-202ENST00000407622 OR10G7Q8NGN6 311 aa13.78□□□□□ -0.2
COL23A1-202ENST00000407622 RPUSD4Q96CM3 377 aaKnown RBP13.78□□□□□ -0.2
COL23A1-202ENST00000407622 QTRT1Q9BXR0 403 aaKnown RBP13.78□□□□□ -0.2
COL23A1-202ENST00000407622 CEP250Q9BV73 2442 aa13.78□□□□□ -0.2
COL23A1-202ENST00000407622 MARCH11A6NNE9 402 aa13.78□□□□□ -0.2
COL23A1-202ENST00000407622 IFNA1P01562 189 aa13.78□□□□□ -0.2
COL23A1-202ENST00000407622 SOD3P08294 240 aa13.78□□□□□ -0.2
COL23A1-202ENST00000407622 OR9G9P0C7N8 305 aa13.78□□□□□ -0.2
COL23A1-202ENST00000407622 TRGC1P0CF51 173 aa13.78□□□□□ -0.2
COL23A1-202ENST00000407622 ADIRFQ15847 76 aa13.78□□□□□ -0.2
COL23A1-202ENST00000407622 SMIM21Q3B7S5 101 aa13.78□□□□□ -0.2
COL23A1-202ENST00000407622 PYY3Q5JQD4 70 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms