RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 CADM4Q8NFZ8 388 aa13.07□□□□□ -0.32
ATG4B-205ENST00000404914 WDYHV1Q96HA8 205 aa13.07□□□□□ -0.32
ATG4B-205ENST00000404914 YPEL2Q96QA6 119 aa13.07□□□□□ -0.32
ATG4B-205ENST00000404914 PARD6GQ9BYG4 376 aaPredicted RBP13.07□□□□□ -0.32
ATG4B-205ENST00000404914 GOLT1BQ9Y3E0 138 aa13.07□□□□□ -0.32
ATG4B-205ENST00000404914 RNF114Q9Y508 228 aa13.07□□□□□ -0.32
ATG4B-205ENST00000404914 TRBV20OR9-2A0A075B6H5 130 aa13.06□□□□□ -0.32
ATG4B-205ENST00000404914 ZG16O60844 167 aa13.06□□□□□ -0.32
ATG4B-205ENST00000404914 NDUFB4O95168 129 aa13.06□□□□□ -0.32
ATG4B-205ENST00000404914 SSR4P51571 173 aa13.06□□□□□ -0.32
ATG4B-205ENST00000404914 LINC00205P59089 165 aa13.06□□□□□ -0.32
ATG4B-205ENST00000404914 TOMM20LQ6UXN7 152 aa13.06□□□□□ -0.32
ATG4B-205ENST00000404914 C5orf30Q96GV9 206 aa13.06□□□□□ -0.32
ATG4B-205ENST00000404914 STRADBQ9C0K7 418 aa13.06□□□□□ -0.32
ATG4B-205ENST00000404914 CBR3O75828 277 aa13.06□□□□□ -0.32
ATG4B-205ENST00000404914 OR10J1P30954 320 aa13.06□□□□□ -0.32
ATG4B-205ENST00000404914 PCBD1P61457 104 aa13.06□□□□□ -0.32
ATG4B-205ENST00000404914 ARF1P84077 181 aaKnown RBP13.06□□□□□ -0.32
ATG4B-205ENST00000404914 RELQ04864 619 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-205ENST00000404914 SAXO1Q8IYX7 474 aa13.06□□□□□ -0.32
ATG4B-205ENST00000404914 TIMM9Q9Y5J7 89 aa13.06□□□□□ -0.32
ATG4B-205ENST00000404914 TRAV38-1A0A0B4J264 116 aa13.06□□□□□ -0.32
ATG4B-205ENST00000404914 SIRPB1O00241 398 aa13.06□□□□□ -0.32
ATG4B-205ENST00000404914 PPP1CBP62140 327 aa13.06□□□□□ -0.32
ATG4B-205ENST00000404914 RPL30P62888 115 aaKnown RBP13.06□□□□□ -0.32
ATG4B-205ENST00000404914 ZNF816Q0VGE8 651 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-205ENST00000404914 OR5A2Q8NGI9 324 aa13.06□□□□□ -0.32
ATG4B-205ENST00000404914 ZCCHC14Q8WYQ9 949 aaKnown RBP13.06□□□□□ -0.32
ATG4B-205ENST00000404914 LY6G6EA0A0G2JKS1 128 aa13.05□□□□□ -0.32
ATG4B-205ENST00000404914 SP9P0CG40 484 aa13.05□□□□□ -0.32
ATG4B-205ENST00000404914 TFPI2P48307 235 aa13.05□□□□□ -0.32
ATG4B-205ENST00000404914 HOXA4Q00056 320 aaPredicted RBP13.05□□□□□ -0.32
ATG4B-205ENST00000404914 BATFQ16520 125 aa13.05□□□□□ -0.32
ATG4B-205ENST00000404914 KCNIP4Q6PIL6 250 aa13.05□□□□□ -0.32
ATG4B-205ENST00000404914 SGMS2Q8NHU3 365 aa13.05□□□□□ -0.32
ATG4B-205ENST00000404914 NPCDR1Q9BY65 106 aa13.05□□□□□ -0.32
ATG4B-205ENST00000404914 PAM16Q9Y3D7 125 aa13.05□□□□□ -0.32
ATG4B-205ENST00000404914 U3KQA8 63 aa13.05□□□□□ -0.32
ATG4B-205ENST00000404914 RPLP1P05386 114 aaKnown RBP13.05□□□□□ -0.32
ATG4B-205ENST00000404914 TPTE2P1Q5T6R2 138 aa13.05□□□□□ -0.32
ATG4B-205ENST00000404914 PMS2CLQ68D20 193 aa13.05□□□□□ -0.32
ATG4B-205ENST00000404914 ZNF573Q86YE8 665 aa13.05□□□□□ -0.32
ATG4B-205ENST00000404914 FAM58AQ8N1B3 248 aa13.05□□□□□ -0.32
ATG4B-205ENST00000404914 Q8N7P7 452 aa13.05□□□□□ -0.32
ATG4B-205ENST00000404914 ELOVL5Q9NYP7 299 aa13.05□□□□□ -0.32
ATG4B-205ENST00000404914 PPIAL4AQ9Y536 164 aa13.05□□□□□ -0.32
ATG4B-205ENST00000404914 TRBV6-6A0A0A6YYG2 114 aa13.04□□□□□ -0.32
ATG4B-205ENST00000404914 TRAPPC6AO75865 159 aa13.04□□□□□ -0.32
ATG4B-205ENST00000404914 LCN2P80188 198 aa13.04□□□□□ -0.32
ATG4B-205ENST00000404914 RPS19BP1Q86WX3 136 aaKnown RBP13.04□□□□□ -0.32
ATG4B-205ENST00000404914 PARD6AQ9NPB6 346 aa13.04□□□□□ -0.32
ATG4B-205ENST00000404914 DNAJC13O75165 2243 aa13.04□□□□□ -0.32
ATG4B-205ENST00000404914 DMXL1Q9Y485 3027 aa13.04□□□□□ -0.32
ATG4B-205ENST00000404914 LOC102723996A0A087X1L8 192 aa13.04□□□□□ -0.32
ATG4B-205ENST00000404914 ODAMA1E959 279 aa13.04□□□□□ -0.32
ATG4B-205ENST00000404914 VENTXO95231 258 aa13.04□□□□□ -0.32
ATG4B-205ENST00000404914 CBLN1P23435 193 aa13.04□□□□□ -0.32
ATG4B-205ENST00000404914 THBS3P49746 956 aa13.04□□□□□ -0.32
ATG4B-205ENST00000404914 TMEM147Q9BVK8 224 aa13.04□□□□□ -0.32
ATG4B-205ENST00000404914 MRPS18CQ9Y3D5 142 aaKnown RBP13.04□□□□□ -0.32
ATG4B-205ENST00000404914 TNFSF10P50591 281 aa13.03□□□□□ -0.32
ATG4B-205ENST00000404914 SOX8P57073 446 aa13.03□□□□□ -0.32
ATG4B-205ENST00000404914 BRWD1-AS2P59051 145 aa13.03□□□□□ -0.32
ATG4B-205ENST00000404914 ARSJQ5FYB0 599 aaPredicted RBP13.03□□□□□ -0.32
ATG4B-205ENST00000404914 RIPPLY2Q5TAB7 128 aa13.03□□□□□ -0.32
ATG4B-205ENST00000404914 Q6P435 159 aa13.03□□□□□ -0.32
ATG4B-205ENST00000404914 CMTM2Q8TAZ6 248 aa13.03□□□□□ -0.32
ATG4B-205ENST00000404914 LPAR2Q9HBW0 351 aa13.03□□□□□ -0.32
ATG4B-205ENST00000404914 TMEM106BQ9NUM4 274 aa13.03□□□□□ -0.32
ATG4B-205ENST00000404914 LIN7CQ9NUP9 197 aaKnown RBP13.03□□□□□ -0.32
ATG4B-205ENST00000404914 HSPB7Q9UBY9 170 aa13.03□□□□□ -0.32
ATG4B-205ENST00000404914 DOCK10Q96BY6 2186 aa13.03□□□□□ -0.32
ATG4B-205ENST00000404914 MUC6Q6W4X9 2439 aa13.03□□□□□ -0.32
ATG4B-205ENST00000404914 PINLYPA6NC86 204 aa13.03□□□□□ -0.32
ATG4B-205ENST00000404914 DEGS1O15121 323 aa13.03□□□□□ -0.32
ATG4B-205ENST00000404914 KLF7O75840 302 aaPredicted RBP13.03□□□□□ -0.32
ATG4B-205ENST00000404914 BRS3P32247 399 aa13.03□□□□□ -0.32
ATG4B-205ENST00000404914 LHX2P50458 406 aa13.03□□□□□ -0.32
ATG4B-205ENST00000404914 ZNF808Q8N4W9 903 aaPredicted RBP13.03□□□□□ -0.32
ATG4B-205ENST00000404914 RIMS4Q9H426 269 aaPredicted RBP13.03□□□□□ -0.32
ATG4B-205ENST00000404914 DEPPQ9NTK1 212 aa13.03□□□□□ -0.32
ATG4B-205ENST00000404914 TOX3O15405 576 aaPredicted RBP13.03□□□□□ -0.32
ATG4B-205ENST00000404914 COX5AP20674 150 aa13.03□□□□□ -0.32
ATG4B-205ENST00000404914 CD82P27701 267 aa13.03□□□□□ -0.32
ATG4B-205ENST00000404914 MRPS11P82912 194 aaKnown RBP13.03□□□□□ -0.32
ATG4B-205ENST00000404914 MSL2Q9HCI7 577 aa13.03□□□□□ -0.32
ATG4B-205ENST00000404914 URB1O60287 2271 aaKnown RBP13.02□□□□□ -0.32
ATG4B-205ENST00000404914 GJE1A6NN92 205 aa13.02□□□□□ -0.33
ATG4B-205ENST00000404914 PATE3B3GLJ2 98 aa13.02□□□□□ -0.33
ATG4B-205ENST00000404914 S1PR2O95136 353 aa13.02□□□□□ -0.33
ATG4B-205ENST00000404914 COMPP49747 757 aaPredicted RBP13.02□□□□□ -0.33
ATG4B-205ENST00000404914 NUFIP2Q7Z417 695 aaKnown RBP13.02□□□□□ -0.33
ATG4B-205ENST00000404914 HSPB9Q9BQS6 159 aa13.02□□□□□ -0.33
ATG4B-205ENST00000404914 TRAPPC2LQ9UL33 140 aa13.02□□□□□ -0.33
ATG4B-205ENST00000404914 SERF1AO75920 110 aa13.02□□□□□ -0.33
ATG4B-205ENST00000404914 CDC34P49427 236 aaPredicted RBP13.02□□□□□ -0.33
ATG4B-205ENST00000404914 CEBPDP49716 269 aaPredicted RBP13.02□□□□□ -0.33
ATG4B-205ENST00000404914 SPATA46Q5T0L3 261 aa13.02□□□□□ -0.33
ATG4B-205ENST00000404914 LYSMD4Q5XG99 296 aa13.02□□□□□ -0.33
ATG4B-205ENST00000404914 VN1R17PQ8TDU5 208 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms