RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 MINDY2Q8NBR6 621 aa10.37□□□□□ -0.75
SDF4-203ENST00000403997 OR11H1Q8NG94 326 aa10.37□□□□□ -0.75
SDF4-203ENST00000403997 MYOZ3Q8TDC0 251 aa10.37□□□□□ -0.75
SDF4-203ENST00000403997 FLYWCH2Q96CP2 140 aaKnown RBP10.37□□□□□ -0.75
SDF4-203ENST00000403997 OR5B12Q96R08 314 aa10.37□□□□□ -0.75
SDF4-203ENST00000403997 ST6GALNAC5Q9BVH7 336 aa10.37□□□□□ -0.75
SDF4-203ENST00000403997 SLC35D1Q9NTN3 355 aa10.37□□□□□ -0.75
SDF4-203ENST00000403997 FOXA2Q9Y261 457 aaPredicted RBP10.37□□□□□ -0.75
SDF4-203ENST00000403997 RRP15Q9Y3B9 282 aaKnown RBP10.37□□□□□ -0.75
SDF4-203ENST00000403997 FBXO7Q9Y3I1 522 aa10.37□□□□□ -0.75
SDF4-203ENST00000403997 NUBP2Q9Y5Y2 271 aa10.37□□□□□ -0.75
SDF4-203ENST00000403997 DNAH3Q8TD57 4116 aa10.36□□□□□ -0.75
SDF4-203ENST00000403997 DIRAS3O95661 229 aa10.36□□□□□ -0.75
SDF4-203ENST00000403997 EGR2P11161 476 aaPredicted RBP10.36□□□□□ -0.75
SDF4-203ENST00000403997 SNRPBP14678 240 aaKnown RBP10.36□□□□□ -0.75
SDF4-203ENST00000403997 SDC2P34741 201 aa10.36□□□□□ -0.75
SDF4-203ENST00000403997 CRIP2P52943 208 aaPredicted RBP10.36□□□□□ -0.75
SDF4-203ENST00000403997 SRSF7Q16629 238 aaKnown RBP eCLIP10.36□□□□□ -0.752e-11■■■■■ 40.5
SDF4-203ENST00000403997 UNQ5815/PRO19632Q6UWF5 114 aa10.36□□□□□ -0.75
SDF4-203ENST00000403997 ZNF562Q6V9R5 426 aa10.36□□□□□ -0.75
SDF4-203ENST00000403997 PPP1R27Q86WC6 154 aa10.36□□□□□ -0.75
SDF4-203ENST00000403997 OR1N2Q8NGR9 330 aa10.36□□□□□ -0.75
SDF4-203ENST00000403997 FAM103A1Q9BTL3 118 aaKnown RBP10.36□□□□□ -0.75
SDF4-203ENST00000403997 CENPOQ9BU64 300 aa10.36□□□□□ -0.75
SDF4-203ENST00000403997 GNB4Q9HAV0 340 aa10.36□□□□□ -0.75
SDF4-203ENST00000403997 SDHAF2Q9NX18 166 aa10.36□□□□□ -0.75
SDF4-203ENST00000403997 ZMAT5Q9UDW3 170 aaKnown RBP10.36□□□□□ -0.75
SDF4-203ENST00000403997 GAB2Q9UQC2 676 aa10.36□□□□□ -0.75
SDF4-203ENST00000403997 IGKV1D-8A0A087WSZ0 117 aa10.35□□□□□ -0.75
SDF4-203ENST00000403997 LOC100506127A0A0U1RQW1 187 aa10.35□□□□□ -0.75
SDF4-203ENST00000403997 I3L521 148 aa10.35□□□□□ -0.75
SDF4-203ENST00000403997 SLC25A17O43808 307 aa10.35□□□□□ -0.75
SDF4-203ENST00000403997 SPDEFO95238 335 aa10.35□□□□□ -0.75
SDF4-203ENST00000403997 CA2P00918 260 aa10.35□□□□□ -0.75
SDF4-203ENST00000403997 DTYMKP23919 212 aa10.35□□□□□ -0.75
SDF4-203ENST00000403997 DGCR2P98153 550 aa10.35□□□□□ -0.75
SDF4-203ENST00000403997 RUNX1Q01196 453 aa10.35□□□□□ -0.75
SDF4-203ENST00000403997 MXD1Q05195 221 aa10.35□□□□□ -0.75
SDF4-203ENST00000403997 NEDD8Q15843 81 aa10.35□□□□□ -0.75
SDF4-203ENST00000403997 C19orf54Q5BKX5 351 aa10.35□□□□□ -0.75
SDF4-203ENST00000403997 C9orf66Q5T8R8 295 aa10.35□□□□□ -0.75
SDF4-203ENST00000403997 HACD4Q5VWC8 232 aa10.35□□□□□ -0.75
SDF4-203ENST00000403997 SFXN4Q6P4A7 337 aa10.35□□□□□ -0.75
SDF4-203ENST00000403997 Q6ZS49 121 aa10.35□□□□□ -0.75
SDF4-203ENST00000403997 TCTEX1D1Q8N7M0 179 aa10.35□□□□□ -0.75
SDF4-203ENST00000403997 CASTOR1Q8WTX7 329 aa10.35□□□□□ -0.75
SDF4-203ENST00000403997 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.35□□□□□ -0.75
SDF4-203ENST00000403997 SEC14L6B5MCN3 397 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 J3QRK9 145 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 SOX15O60248 233 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 SCGNO76038 276 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 CNIH1O95406 144 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 CLEC2LP0C7M8 214 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 OR8U8P0C7N1 319 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 CD36P16671 472 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 CD40LGP29965 261 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 LGALS7P47929 136 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 LUMP51884 338 aaPredicted RBP10.34□□□□□ -0.75
SDF4-203ENST00000403997 GNB1P62873 340 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 PITPNAQ00169 270 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 ZNF616Q08AN1 781 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 CBX3Q13185 183 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 FHL3Q13643 280 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 FXYD3Q14802 87 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 AKIRIN2Q53H80 203 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 ACTBL2Q562R1 376 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 H1FOOQ8IZA3 346 aaPredicted RBP10.34□□□□□ -0.75
SDF4-203ENST00000403997 BVESQ8NE79 360 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 LFNGQ8NES3 379 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 GRPEL2Q8TAA5 225 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 LGALS14Q8TCE9 139 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 RNF167Q9H6Y7 350 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 TPSG1Q9NRR2 321 aa10.34□□□□□ -0.75
SDF4-203ENST00000403997 TMEM235A6NFC5 223 aa10.33□□□□□ -0.76
SDF4-203ENST00000403997 SHOXO15266 292 aa10.33□□□□□ -0.76
SDF4-203ENST00000403997 CTXN2P0C2S0 81 aa10.33□□□□□ -0.76
SDF4-203ENST00000403997 GNG2P59768 71 aa10.33□□□□□ -0.76
SDF4-203ENST00000403997 TAGLNQ01995 201 aaKnown RBP10.33□□□□□ -0.76
SDF4-203ENST00000403997 RTL8BQ17RB0 113 aa10.33□□□□□ -0.76
SDF4-203ENST00000403997 ZNF260Q3ZCT1 412 aa10.33□□□□□ -0.76
SDF4-203ENST00000403997 KCTD21Q4G0X4 260 aa10.33□□□□□ -0.76
SDF4-203ENST00000403997 IDNKQ5T6J7 187 aa10.33□□□□□ -0.76
SDF4-203ENST00000403997 PYHIN1Q6K0P9 492 aa10.33□□□□□ -0.76
SDF4-203ENST00000403997 NUDCD2Q8WVJ2 157 aa10.33□□□□□ -0.76
SDF4-203ENST00000403997 ARPC1AQ92747 370 aa10.33□□□□□ -0.76
SDF4-203ENST00000403997 C5orf30Q96GV9 206 aa10.33□□□□□ -0.76
SDF4-203ENST00000403997 ADTRPQ96IZ2 230 aa10.33□□□□□ -0.76
SDF4-203ENST00000403997 HARBI1Q96MB7 349 aa10.33□□□□□ -0.76
SDF4-203ENST00000403997 MS4A10Q96PG2 267 aa10.33□□□□□ -0.76
SDF4-203ENST00000403997 DCSTAMPQ9H295 470 aa10.33□□□□□ -0.76
SDF4-203ENST00000403997 RHBDL2Q9NX52 303 aa10.33□□□□□ -0.76
SDF4-203ENST00000403997 ARPC1BO15143 372 aaKnown RBP10.32□□□□□ -0.76
SDF4-203ENST00000403997 RAMP3O60896 148 aa10.32□□□□□ -0.76
SDF4-203ENST00000403997 IGLV2-23P01705 113 aa10.32□□□□□ -0.76
SDF4-203ENST00000403997 RRASP10301 218 aa10.32□□□□□ -0.76
SDF4-203ENST00000403997 ECI1P42126 302 aa10.32□□□□□ -0.76
SDF4-203ENST00000403997 PJVKQ0ZLH3 352 aa10.32□□□□□ -0.76
SDF4-203ENST00000403997 ASPHD1Q5U4P2 390 aa10.32□□□□□ -0.76
SDF4-203ENST00000403997 OR5H6Q8NGV6 325 aa10.32□□□□□ -0.76
SDF4-203ENST00000403997 DCUN1D4Q92564 292 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms