RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 SCCPDHQ8NBX0 429 aa16.65■□□□□ 0.26
CCDC47-202ENST00000403162 UBALD1Q8TB05 177 aa16.65■□□□□ 0.26
CCDC47-202ENST00000403162 RPUSD4Q96CM3 377 aaKnown RBP16.65■□□□□ 0.26
CCDC47-202ENST00000403162 PARLQ9H300 379 aa16.65■□□□□ 0.26
CCDC47-202ENST00000403162 SLC25A22Q9H936 323 aa16.65■□□□□ 0.26
CCDC47-202ENST00000403162 LAMP3Q9UQV4 416 aa16.65■□□□□ 0.26
CCDC47-202ENST00000403162 KLF13Q9Y2Y9 288 aaPredicted RBP16.65■□□□□ 0.26
CCDC47-202ENST00000403162 MED12LQ86YW9 2145 aa16.65■□□□□ 0.26
CCDC47-202ENST00000403162 C1QTNF9BB2RNN3 333 aa16.64■□□□□ 0.25
CCDC47-202ENST00000403162 K7ENP7 123 aa16.64■□□□□ 0.25
CCDC47-202ENST00000403162 C1QTNF9P0C862 333 aa16.64■□□□□ 0.25
CCDC47-202ENST00000403162 SSTP61278 116 aa16.64■□□□□ 0.25
CCDC47-202ENST00000403162 IGFBP7Q16270 282 aa16.64■□□□□ 0.25
CCDC47-202ENST00000403162 INO80CQ6PI98 192 aaPredicted RBP16.64■□□□□ 0.25
CCDC47-202ENST00000403162 TTTY12Q9BZ98 90 aa16.64■□□□□ 0.25
CCDC47-202ENST00000403162 A0A087X0M5 115 aa16.64■□□□□ 0.25
CCDC47-202ENST00000403162 A0A1B0GX30 115 aa16.64■□□□□ 0.25
CCDC47-202ENST00000403162 FAM166BA8MTA8 275 aa16.64■□□□□ 0.25
CCDC47-202ENST00000403162 PPP5D1E7EU14 171 aa16.64■□□□□ 0.25
CCDC47-202ENST00000403162 MKRN2OSH3BPM6 223 aa16.64■□□□□ 0.25
CCDC47-202ENST00000403162 HRASP01112 189 aa16.64■□□□□ 0.25
CCDC47-202ENST00000403162 GZMHP20718 246 aa16.64■□□□□ 0.25
CCDC47-202ENST00000403162 IGFL2Q6UWQ7 119 aa16.64■□□□□ 0.25
CCDC47-202ENST00000403162 PMS2P5A8MQ11 134 aa16.63■□□□□ 0.25
CCDC47-202ENST00000403162 SH2D1BO14796 132 aa16.63■□□□□ 0.25
CCDC47-202ENST00000403162 IL18BPO95998 194 aa16.63■□□□□ 0.25
CCDC47-202ENST00000403162 FGF7P21781 194 aa16.63■□□□□ 0.25
CCDC47-202ENST00000403162 TNFSF10P50591 281 aa16.63■□□□□ 0.25
CCDC47-202ENST00000403162 FAM3BP58499 235 aaPredicted RBP16.63■□□□□ 0.25
CCDC47-202ENST00000403162 ZNF766Q5HY98 468 aa16.63■□□□□ 0.25
CCDC47-202ENST00000403162 NECAP1Q8NC96 275 aa16.63■□□□□ 0.25
CCDC47-202ENST00000403162 OR10G9Q8NGN4 311 aa16.63■□□□□ 0.25
CCDC47-202ENST00000403162 OR10G7Q8NGN6 311 aa16.63■□□□□ 0.25
CCDC47-202ENST00000403162 NANOS1Q8WY41 292 aaKnown RBP16.63■□□□□ 0.25
CCDC47-202ENST00000403162 ANAPC16Q96DE5 110 aa16.63■□□□□ 0.25
CCDC47-202ENST00000403162 ACY3Q96HD9 319 aa16.63■□□□□ 0.25
CCDC47-202ENST00000403162 MRPL37Q9BZE1 423 aaKnown RBP16.63■□□□□ 0.25
CCDC47-202ENST00000403162 ACTR3CQ9C0K3 210 aaPredicted RBP16.63■□□□□ 0.25
CCDC47-202ENST00000403162 PRO1933Q9H354 126 aa16.63■□□□□ 0.25
CCDC47-202ENST00000403162 DMXL2Q8TDJ6 3036 aa16.63■□□□□ 0.25
CCDC47-202ENST00000403162 LRRC30A6NM36 301 aa16.62■□□□□ 0.25
CCDC47-202ENST00000403162 J3QW42 95 aa16.62■□□□□ 0.25
CCDC47-202ENST00000403162 GZMBP10144 247 aa16.62■□□□□ 0.25
CCDC47-202ENST00000403162 EIF4EBP1Q13541 118 aaPredicted RBP16.62■□□□□ 0.25
CCDC47-202ENST00000403162 SPATA46Q5T0L3 261 aa16.62■□□□□ 0.25
CCDC47-202ENST00000403162 SSX9Q7RTT3 188 aa16.62■□□□□ 0.25
CCDC47-202ENST00000403162 MCEMP1Q8IX19 187 aa16.62■□□□□ 0.25
CCDC47-202ENST00000403162 TMEM170AQ8WVE7 144 aa16.62■□□□□ 0.25
CCDC47-202ENST00000403162 BCL2L2Q92843 193 aaPredicted RBP16.62■□□□□ 0.25
CCDC47-202ENST00000403162 RAMP3O60896 148 aa16.62■□□□□ 0.25
CCDC47-202ENST00000403162 PDLIM4P50479 330 aa16.62■□□□□ 0.25
CCDC47-202ENST00000403162 TMPRSS3P57727 454 aa16.62■□□□□ 0.25
CCDC47-202ENST00000403162 ERVS71-1P61550 626 aa16.62■□□□□ 0.25
CCDC47-202ENST00000403162 MDP1Q86V88 176 aa16.62■□□□□ 0.25
CCDC47-202ENST00000403162 TMEM251Q8N6I4 163 aa16.62■□□□□ 0.25
CCDC47-202ENST00000403162 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.62■□□□□ 0.25
CCDC47-202ENST00000403162 XKRY2A2RUG3 117 aa16.61■□□□□ 0.25
CCDC47-202ENST00000403162 KLRC4-KLRK1H3BQV0 150 aa16.61■□□□□ 0.25
CCDC47-202ENST00000403162 NXPH2O95156 264 aa16.61■□□□□ 0.25
CCDC47-202ENST00000403162 VENTXO95231 258 aa16.61■□□□□ 0.25
CCDC47-202ENST00000403162 COX5AP20674 150 aa16.61■□□□□ 0.25
CCDC47-202ENST00000403162 MEOX1P50221 254 aa16.61■□□□□ 0.25
CCDC47-202ENST00000403162 UCNP55089 124 aa16.61■□□□□ 0.25
CCDC47-202ENST00000403162 VWC2Q2TAL6 325 aa16.61■□□□□ 0.25
CCDC47-202ENST00000403162 FFAR4Q5NUL3 377 aa16.61■□□□□ 0.25
CCDC47-202ENST00000403162 UNQ6494/PRO21346Q6UXR6 183 aa16.61■□□□□ 0.25
CCDC47-202ENST00000403162 TMEM178AQ8NBL3 297 aa16.61■□□□□ 0.25
CCDC47-202ENST00000403162 OR4F5Q8NH21 305 aa16.61■□□□□ 0.25
CCDC47-202ENST00000403162 OR4F4Q96R69 305 aa16.61■□□□□ 0.25
CCDC47-202ENST00000403162 ODAMA1E959 279 aa16.61■□□□□ 0.25
CCDC47-202ENST00000403162 HMGB3O15347 200 aaKnown RBP16.61■□□□□ 0.25
CCDC47-202ENST00000403162 GGCTO75223 188 aaKnown RBP16.61■□□□□ 0.25
CCDC47-202ENST00000403162 TUBG1P23258 451 aa16.61■□□□□ 0.25
CCDC47-202ENST00000403162 G6PCP35575 357 aa16.61■□□□□ 0.25
CCDC47-202ENST00000403162 PLGLB1Q02325 96 aa16.61■□□□□ 0.25
CCDC47-202ENST00000403162 OR10P1Q8NGE3 313 aa16.61■□□□□ 0.25
CCDC47-202ENST00000403162 RAB24Q969Q5 203 aa16.61■□□□□ 0.25
CCDC47-202ENST00000403162 CLN8Q9UBY8 286 aa16.61■□□□□ 0.25
CCDC47-202ENST00000403162 KRASP01116 189 aa16.6■□□□□ 0.25
CCDC47-202ENST00000403162 TYMSP04818 313 aa16.6■□□□□ 0.25
CCDC47-202ENST00000403162 SRP14P37108 136 aaKnown RBP16.6■□□□□ 0.25
CCDC47-202ENST00000403162 ZNF66Q6ZN08 573 aa16.6■□□□□ 0.25
CCDC47-202ENST00000403162 C5orf30Q96GV9 206 aa16.6■□□□□ 0.25
CCDC47-202ENST00000403162 MEGF10Q96KG7 1140 aa16.6■□□□□ 0.25
CCDC47-202ENST00000403162 PCGF1Q9BSM1 259 aa16.6■□□□□ 0.25
CCDC47-202ENST00000403162 ELOVL1Q9BW60 279 aa16.6■□□□□ 0.25
CCDC47-202ENST00000403162 KCNIP1Q9NZI2 227 aa16.6■□□□□ 0.25
CCDC47-202ENST00000403162 NCOR2Q9Y618 2525 aa16.6■□□□□ 0.25
CCDC47-202ENST00000403162 GYPAP02724 150 aa16.6■□□□□ 0.25
CCDC47-202ENST00000403162 RPL30P62888 115 aaKnown RBP16.6■□□□□ 0.25
CCDC47-202ENST00000403162 CATR1Q13166 79 aa16.6■□□□□ 0.25
CCDC47-202ENST00000403162 HNF4GQ14541 408 aa16.6■□□□□ 0.25
CCDC47-202ENST00000403162 TBC1D28Q2M2D7 210 aa16.6■□□□□ 0.25
CCDC47-202ENST00000403162 ACTL10Q5JWF8 245 aa16.6■□□□□ 0.25
CCDC47-202ENST00000403162 ZADH2Q8N4Q0 377 aa16.6■□□□□ 0.25
CCDC47-202ENST00000403162 DTD1Q8TEA8 209 aa16.6■□□□□ 0.25
CCDC47-202ENST00000403162 GATAD1Q8WUU5 269 aa16.6■□□□□ 0.25
CCDC47-202ENST00000403162 NEIL1Q96FI4 390 aaPredicted RBP16.6■□□□□ 0.25
CCDC47-202ENST00000403162 CIB3Q96Q77 187 aaPredicted RBP16.6■□□□□ 0.25
CCDC47-202ENST00000403162 NPCDR1Q9BY65 106 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms