RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 NUDCD2Q8WVJ2 157 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 PTX4Q96A99 478 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 RAX2Q96IS3 184 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 KCTD7Q96MP8 289 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 CLCC1Q96S66 551 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 CABLES2Q9BTV7 478 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 CENPOQ9BU64 300 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 OR2D2Q9H210 308 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 KLK15Q9H2R5 256 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 OR51J1Q9H342 316 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 AURKAIP1Q9NWT8 199 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 KIAA1456Q9P272 454 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 ZNF221Q9UK13 617 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 MGAT4AQ9UM21 535 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 GAB2Q9UQC2 676 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 FBXO7Q9Y3I1 522 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 A3GALT2U3KPV4 340 aa4.51□□□□□ -1.69
HMGB1P20-201ENST00000402555 TRBV6-7A0A0A0MS04 114 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 TRAV41A0A0B4J266 112 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 TMEM235A6NFC5 223 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 OR5H14A6NHG9 310 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 SSX5O60225 188 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 NDUFA3O95167 84 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 IGHG4P01861 327 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 IGKV1-16P04430 117 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 IGF1P05019 195 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 TFAP2AP05549 437 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 FCER2P06734 321 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 PTHLHP12272 177 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 TALDO1P37837 337 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 RANBP1P43487 201 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 RAB25P57735 213 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 KRTAP10-11P60412 298 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 RPS16P62249 146 aaKnown RBP4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 CX3CL1P78423 397 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 FOXE3Q13461 319 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 KIR2DS1Q14954 304 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 PLGLAQ15195 96 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 IDNKQ5T6J7 187 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 FAM71F2Q6NXP2 309 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 TPRA1Q86W33 373 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 OR5AN1Q8NGI8 311 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 OR10J5Q8NHC4 309 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 MRAPQ8TCY5 172 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 ABHD5Q8WTS1 349 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 SLC25A38Q96DW6 304 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 OR5B12Q96R08 314 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 P2RX4Q99571 388 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 GINS4Q9BRT9 223 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 FAM103A1Q9BTL3 118 aaKnown RBP4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 ST6GALNAC5Q9BVH7 336 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 KRTAP4-9Q9BYQ8 210 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 TOLLIPQ9H0E2 274 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 GNB4Q9HAV0 340 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 ZFP57Q9NU63 452 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 NECAP2Q9NVZ3 263 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 SDHAF2Q9NX18 166 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 RHBDL2Q9NX52 303 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 METTL1Q9UBP6 276 aaKnown RBP4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 WASHC3Q9Y3C0 194 aa4.5□□□□□ -1.69
HMGB1P20-201ENST00000402555 TRAV18A0A075B6X5 111 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 A0A1W2PN81 502 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 WI2-2373I1.2A0A1W2PRP0 233 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 K7EIL1 84 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 CCL24O00175 119 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 SLC25A17O43808 307 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 SOX15O60248 233 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 RBBP9O75884 186 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 CA2P00918 260 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 APOA2P02652 100 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 ELANEP08246 267 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 EGR2P11161 476 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 NFYAP23511 347 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 PSMB8P28062 276 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 PPIFP30405 207 aaKnown RBP4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 MC5RP33032 325 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 CHRNA7P36544 502 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 MYCNOSP40205 109 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 SERPINB10P48595 397 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 LSM3P62310 102 aaKnown RBP4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 KIAA0141Q14154 515 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 PSG5Q15238 335 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 ZNF260Q3ZCT1 412 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 C19orf54Q5BKX5 351 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 HACD4Q5VWC8 232 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 TMEM65Q6PI78 240 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 H1FOOQ8IZA3 346 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 RNF152Q8N8N0 203 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 BVESQ8NE79 360 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 TSPAN14Q8NG11 270 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 YIPF6Q96EC8 236 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 RCC1LQ96I51 464 aaKnown RBP4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 GON7Q9BXV9 100 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 ALX4Q9H161 411 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 SLC35D1Q9NTN3 355 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 C19orf73Q9NVV2 129 aa4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 RBM7Q9Y580 266 aaKnown RBP4.49□□□□□ -1.69
HMGB1P20-201ENST00000402555 COL7A1Q02388 2944 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms