RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 FCGR2CP31995 323 aa7.38□□□□□ -1.23
VPS53-203ENST00000401468 CEACAM3P40198 252 aa7.38□□□□□ -1.23
VPS53-203ENST00000401468 GNG10P50151 68 aa7.38□□□□□ -1.23
VPS53-203ENST00000401468 RAG2P55895 527 aa7.38□□□□□ -1.23
VPS53-203ENST00000401468 AP3S2P59780 193 aa7.38□□□□□ -1.23
VPS53-203ENST00000401468 RNASE12Q5GAN4 147 aaKnown RBP7.38□□□□□ -1.23
VPS53-203ENST00000401468 RNASE10Q5GAN6 216 aaKnown RBP7.38□□□□□ -1.23
VPS53-203ENST00000401468 TPTE2P1Q5T6R2 138 aa7.38□□□□□ -1.23
VPS53-203ENST00000401468 C16orf87Q6PH81 154 aa7.38□□□□□ -1.23
VPS53-203ENST00000401468 Q6YL49 198 aa7.38□□□□□ -1.23
VPS53-203ENST00000401468 DYNAPQ8N1N2 210 aa7.38□□□□□ -1.23
VPS53-203ENST00000401468 RTN4IP1Q8WWV3 396 aaPredicted RBP7.38□□□□□ -1.23
VPS53-203ENST00000401468 CFHR4Q92496 578 aa7.38□□□□□ -1.23
VPS53-203ENST00000401468 MRGPRFQ96AM1 343 aa7.38□□□□□ -1.23
VPS53-203ENST00000401468 C5orf30Q96GV9 206 aa7.38□□□□□ -1.23
VPS53-203ENST00000401468 ZNF747Q9BV97 191 aa7.38□□□□□ -1.23
VPS53-203ENST00000401468 TINAGL1Q9GZM7 467 aaPredicted RBP7.38□□□□□ -1.23
VPS53-203ENST00000401468 C1RLQ9NZP8 487 aa7.38□□□□□ -1.23
VPS53-203ENST00000401468 A0A1W2PPE3 182 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 M0QYG6 137 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 HSD17B6O14756 317 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 RAB29O14966 203 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 UPK1BO75841 260 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 RAB3DO95716 219 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 FBP1P09467 338 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 IL3RAP26951 378 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 OR3A3P47888 321 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 LUMP51884 338 aaPredicted RBP7.37□□□□□ -1.23
VPS53-203ENST00000401468 EBI3Q14213 229 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 DIAPH2-AS1Q14236 149 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 ZNF124Q15973 351 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 PDLIM3Q53GG5 364 aaPredicted RBP7.37□□□□□ -1.23
VPS53-203ENST00000401468 PLA1AQ53H76 456 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 OR8H3Q8N146 312 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 TOMM5Q8N4H5 51 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 ZNF645Q8N7E2 425 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 ZBTB34Q8NCN2 500 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 OR10X1Q8NGY0 326 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 OR6F1Q8NGZ6 308 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 TERB2Q8NHR7 220 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 PIFOQ8TCI5 191 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 C7orf50Q9BRJ6 194 aaKnown RBP7.37□□□□□ -1.23
VPS53-203ENST00000401468 FXYD6Q9H0Q3 95 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 HRASLSQ9HDD0 168 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 SIGLEC9Q9Y336 463 aa7.37□□□□□ -1.23
VPS53-203ENST00000401468 IGHV1-3A0A0C4DH29 117 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 NAP1L6A6NFF2 107 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 OR5H14A6NHG9 310 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 J3QRK9 145 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 PLA2G10O15496 165 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 GPR137BO60478 399 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 GAPDHP04406 335 aaKnown RBP7.36□□□□□ -1.23
VPS53-203ENST00000401468 CRYBA1P05813 215 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 FCER2P06734 321 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 OR8U9P0C7N5 309 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 GNRHRP30968 328 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 BTCP35070 178 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 FAUP35544 74 aaKnown RBP7.36□□□□□ -1.23
VPS53-203ENST00000401468 IER3P46695 156 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 LGALS4P56470 323 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 IFITM3Q01628 133 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 SURF2Q15527 256 aaPredicted RBP7.36□□□□□ -1.23
VPS53-203ENST00000401468 LY6EQ16553 131 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 TRIQKQ629K1 86 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 CCDC144NLQ6NUI1 221 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 TMEM17Q86X19 198 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 C1QL4Q86Z23 238 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 LYG1Q8N1E2 194 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 TMEM86BQ8N661 226 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 BVESQ8NE79 360 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 OR5AN1Q8NGI8 311 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 OR13C8Q8NGS7 320 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 OR8U1Q8NH10 309 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 OR56B4Q8NH76 319 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 DDB2Q92466 427 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 ABHD14BQ96IU4 210 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 AKR1E2Q96JD6 320 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 PRRT1Q99946 306 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 ZNF2Q9BSG1 426 aaPredicted RBP7.36□□□□□ -1.23
VPS53-203ENST00000401468 RSRP1Q9BUV0 290 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 OR2D2Q9H210 308 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 SDHAF2Q9NX18 166 aa7.36□□□□□ -1.23
VPS53-203ENST00000401468 DISC1C4P0D8 188 aa7.35□□□□□ -1.23
VPS53-203ENST00000401468 CLDN34H7C241 214 aa7.35□□□□□ -1.23
VPS53-203ENST00000401468 AMY2AP04746 511 aa7.35□□□□□ -1.23
VPS53-203ENST00000401468 CT45A6P0DMU7 189 aa7.35□□□□□ -1.23
VPS53-203ENST00000401468 CT45A5P0DMU8 189 aa7.35□□□□□ -1.23
VPS53-203ENST00000401468 CT45A7P0DMV0 189 aa7.35□□□□□ -1.23
VPS53-203ENST00000401468 CD1BP29016 333 aa7.35□□□□□ -1.23
VPS53-203ENST00000401468 ECI1P42126 302 aa7.35□□□□□ -1.23
VPS53-203ENST00000401468 GPR12P47775 334 aa7.35□□□□□ -1.23
VPS53-203ENST00000401468 RND3P61587 244 aa7.35□□□□□ -1.23
VPS53-203ENST00000401468 ASAH1Q13510 395 aa7.35□□□□□ -1.23
VPS53-203ENST00000401468 SSX2Q16385 188 aa7.35□□□□□ -1.23
VPS53-203ENST00000401468 LRRC75BQ2VPJ9 315 aa7.35□□□□□ -1.23
VPS53-203ENST00000401468 FAAP20Q6NZ36 180 aa7.35□□□□□ -1.23
VPS53-203ENST00000401468 LPCAT3Q6P1A2 487 aa7.35□□□□□ -1.23
VPS53-203ENST00000401468 THNSL2Q86YJ6 484 aa7.35□□□□□ -1.23
VPS53-203ENST00000401468 DRAM1Q8N682 238 aa7.35□□□□□ -1.23
VPS53-203ENST00000401468 Q8N6K4 173 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms