RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 RRP15Q9Y3B9 282 aaKnown RBP12.34□□□□□ -0.43
ATG4B-203ENST00000400772 I3L521 148 aa12.33□□□□□ -0.44
ATG4B-203ENST00000400772 DTYMKP23919 212 aa12.33□□□□□ -0.44
ATG4B-203ENST00000400772 TALDO1P37837 337 aa12.33□□□□□ -0.44
ATG4B-203ENST00000400772 RAB25P57735 213 aa12.33□□□□□ -0.44
ATG4B-203ENST00000400772 RPS16P62249 146 aaKnown RBP12.33□□□□□ -0.44
ATG4B-203ENST00000400772 PLGLAQ15195 96 aa12.33□□□□□ -0.44
ATG4B-203ENST00000400772 NEDD8Q15843 81 aa12.33□□□□□ -0.44
ATG4B-203ENST00000400772 ECSCRQ19T08 205 aa12.33□□□□□ -0.44
ATG4B-203ENST00000400772 KCTD21Q4G0X4 260 aa12.33□□□□□ -0.44
ATG4B-203ENST00000400772 HACD4Q5VWC8 232 aa12.33□□□□□ -0.44
ATG4B-203ENST00000400772 TMEM65Q6PI78 240 aa12.33□□□□□ -0.44
ATG4B-203ENST00000400772 PDPNQ86YL7 162 aa12.33□□□□□ -0.44
ATG4B-203ENST00000400772 H1FOOQ8IZA3 346 aaPredicted RBP12.33□□□□□ -0.44
ATG4B-203ENST00000400772 OR11H1Q8NG94 326 aa12.33□□□□□ -0.44
ATG4B-203ENST00000400772 OR2D2Q9H210 308 aa12.33□□□□□ -0.44
ATG4B-203ENST00000400772 METTL1Q9UBP6 276 aaKnown RBP12.33□□□□□ -0.44
ATG4B-203ENST00000400772 CA2P00918 260 aa12.32□□□□□ -0.44
ATG4B-203ENST00000400772 IGLV2-23P01705 113 aa12.32□□□□□ -0.44
ATG4B-203ENST00000400772 CD36P16671 472 aa12.32□□□□□ -0.44
ATG4B-203ENST00000400772 MXD1Q05195 221 aa12.32□□□□□ -0.44
ATG4B-203ENST00000400772 ARL6IP1Q15041 203 aa12.32□□□□□ -0.44
ATG4B-203ENST00000400772 ZNF260Q3ZCT1 412 aa12.32□□□□□ -0.44
ATG4B-203ENST00000400772 ASPHD1Q5U4P2 390 aa12.32□□□□□ -0.44
ATG4B-203ENST00000400772 ZNF562Q6V9R5 426 aa12.32□□□□□ -0.44
ATG4B-203ENST00000400772 LGALS14Q8TCE9 139 aa12.32□□□□□ -0.44
ATG4B-203ENST00000400772 CASTOR1Q8WTX7 329 aa12.32□□□□□ -0.44
ATG4B-203ENST00000400772 FLYWCH2Q96CP2 140 aaKnown RBP12.32□□□□□ -0.44
ATG4B-203ENST00000400772 FAM103A1Q9BTL3 118 aaKnown RBP12.32□□□□□ -0.44
ATG4B-203ENST00000400772 CENPOQ9BU64 300 aa12.32□□□□□ -0.44
ATG4B-203ENST00000400772 GPR61Q9BZJ8 451 aa12.32□□□□□ -0.44
ATG4B-203ENST00000400772 TPSG1Q9NRR2 321 aa12.32□□□□□ -0.44
ATG4B-203ENST00000400772 SLC35D1Q9NTN3 355 aa12.32□□□□□ -0.44
ATG4B-203ENST00000400772 VSIG4Q9Y279 399 aa12.32□□□□□ -0.44
ATG4B-203ENST00000400772 LOC100506127A0A0U1RQW1 187 aa12.31□□□□□ -0.44
ATG4B-203ENST00000400772 A0A1W2PN81 502 aa12.31□□□□□ -0.44
ATG4B-203ENST00000400772 TMEM235A6NFC5 223 aa12.31□□□□□ -0.44
ATG4B-203ENST00000400772 ARPC1BO15143 372 aaKnown RBP12.31□□□□□ -0.44
ATG4B-203ENST00000400772 SPDEFO95238 335 aa12.31□□□□□ -0.44
ATG4B-203ENST00000400772 APOA2P02652 100 aa12.31□□□□□ -0.44
ATG4B-203ENST00000400772 CRYGBP07316 175 aa12.31□□□□□ -0.44
ATG4B-203ENST00000400772 CHRNA7P36544 502 aa12.31□□□□□ -0.44
ATG4B-203ENST00000400772 GNB1P62873 340 aa12.31□□□□□ -0.44
ATG4B-203ENST00000400772 SSBP2P81877 361 aaPredicted RBP12.31□□□□□ -0.44
ATG4B-203ENST00000400772 RUNX1Q01196 453 aa12.31□□□□□ -0.44
ATG4B-203ENST00000400772 PPP1R27Q86WC6 154 aa12.31□□□□□ -0.44
ATG4B-203ENST00000400772 OR5H6Q8NGV6 325 aa12.31□□□□□ -0.44
ATG4B-203ENST00000400772 NUDCD2Q8WVJ2 157 aa12.31□□□□□ -0.44
ATG4B-203ENST00000400772 OR5B12Q96R08 314 aa12.31□□□□□ -0.44
ATG4B-203ENST00000400772 TSNAXQ99598 290 aaKnown RBP12.31□□□□□ -0.44
ATG4B-203ENST00000400772 GINS4Q9BRT9 223 aa12.31□□□□□ -0.44
ATG4B-203ENST00000400772 ST6GALNAC5Q9BVH7 336 aa12.31□□□□□ -0.44
ATG4B-203ENST00000400772 A3GALT2U3KPV4 340 aa12.31□□□□□ -0.44
ATG4B-203ENST00000400772 SRRM4A7MD48 611 aaKnown RBP12.3□□□□□ -0.44
ATG4B-203ENST00000400772 SLC25A17O43808 307 aa12.3□□□□□ -0.44
ATG4B-203ENST00000400772 SSX5O60225 188 aa12.3□□□□□ -0.44
ATG4B-203ENST00000400772 LUMP51884 338 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-203ENST00000400772 AKIRIN2Q53H80 203 aa12.3□□□□□ -0.44
ATG4B-203ENST00000400772 TCTEX1D1Q8N7M0 179 aa12.3□□□□□ -0.44
ATG4B-203ENST00000400772 OR5M8Q8NGP6 311 aa12.3□□□□□ -0.44
ATG4B-203ENST00000400772 OR1N2Q8NGR9 330 aa12.3□□□□□ -0.44
ATG4B-203ENST00000400772 DDB2Q92466 427 aa12.3□□□□□ -0.44
ATG4B-203ENST00000400772 DPF1Q92782 380 aa12.3□□□□□ -0.44
ATG4B-203ENST00000400772 SLC25A38Q96DW6 304 aa12.3□□□□□ -0.44
ATG4B-203ENST00000400772 ALX4Q9H161 411 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-203ENST00000400772 DCSTAMPQ9H295 470 aa12.3□□□□□ -0.44
ATG4B-203ENST00000400772 RHBDL2Q9NX52 303 aa12.3□□□□□ -0.44
ATG4B-203ENST00000400772 FOXA2Q9Y261 457 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-203ENST00000400772 DUTP33316 252 aaKnown RBP12.29□□□□□ -0.44
ATG4B-203ENST00000400772 TGFBR1P36897 503 aa12.29□□□□□ -0.44
ATG4B-203ENST00000400772 TMEM267Q0VDI3 215 aaPredicted RBP12.29□□□□□ -0.44
ATG4B-203ENST00000400772 PJVKQ0ZLH3 352 aa12.29□□□□□ -0.44
ATG4B-203ENST00000400772 MRGPRG-AS1Q2M3A8 158 aa12.29□□□□□ -0.44
ATG4B-203ENST00000400772 TMEM177Q53S58 311 aa12.29□□□□□ -0.44
ATG4B-203ENST00000400772 UNQ5815/PRO19632Q6UWF5 114 aa12.29□□□□□ -0.44
ATG4B-203ENST00000400772 BVESQ8NE79 360 aa12.29□□□□□ -0.44
ATG4B-203ENST00000400772 LFNGQ8NES3 379 aa12.29□□□□□ -0.44
ATG4B-203ENST00000400772 ABHD5Q8WTS1 349 aa12.29□□□□□ -0.44
ATG4B-203ENST00000400772 SCOCQ9UIL1 159 aa12.29□□□□□ -0.44
ATG4B-203ENST00000400772 RBM7Q9Y580 266 aaKnown RBP12.29□□□□□ -0.44
ATG4B-203ENST00000400772 LINC00473A8K010 186 aa12.28□□□□□ -0.44
ATG4B-203ENST00000400772 J3QRK9 145 aa12.28□□□□□ -0.44
ATG4B-203ENST00000400772 SCGNO76038 276 aa12.28□□□□□ -0.44
ATG4B-203ENST00000400772 IGLV2-14P01704 120 aa12.28□□□□□ -0.44
ATG4B-203ENST00000400772 NFYAP23511 347 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-203ENST00000400772 LGALS7P47929 136 aa12.28□□□□□ -0.44
ATG4B-203ENST00000400772 SCAND1P57086 179 aa12.28□□□□□ -0.44
ATG4B-203ENST00000400772 PITPNAQ00169 270 aa12.28□□□□□ -0.44
ATG4B-203ENST00000400772 FXYD3Q14802 87 aa12.28□□□□□ -0.44
ATG4B-203ENST00000400772 ACTBL2Q562R1 376 aa12.28□□□□□ -0.44
ATG4B-203ENST00000400772 DEFB121Q5J5C9 76 aa12.28□□□□□ -0.44
ATG4B-203ENST00000400772 IDNKQ5T6J7 187 aa12.28□□□□□ -0.44
ATG4B-203ENST00000400772 ARPC1AQ92747 370 aa12.28□□□□□ -0.44
ATG4B-203ENST00000400772 SEC14L6B5MCN3 397 aa12.27□□□□□ -0.45
ATG4B-203ENST00000400772 HLA-DQB1P01920 261 aa12.27□□□□□ -0.45
ATG4B-203ENST00000400772 CTXN2P0C2S0 81 aa12.27□□□□□ -0.45
ATG4B-203ENST00000400772 OR8U8P0C7N1 319 aa12.27□□□□□ -0.45
ATG4B-203ENST00000400772 GNG2P59768 71 aa12.27□□□□□ -0.45
ATG4B-203ENST00000400772 DGCR2P98153 550 aa12.27□□□□□ -0.45
ATG4B-203ENST00000400772 TAGLNQ01995 201 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms