RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 FOXG1P55316 489 aaPredicted RBP12.21□□□□□ -0.46
GABPA-202ENST00000400075 BTNL8Q6UX41 500 aa12.21□□□□□ -0.46
GABPA-202ENST00000400075 ZNF645Q8N7E2 425 aa12.21□□□□□ -0.46
GABPA-202ENST00000400075 RXFP4Q8TDU9 374 aa12.21□□□□□ -0.46
GABPA-202ENST00000400075 SCARB1Q8WTV0 552 aa12.21□□□□□ -0.46
GABPA-202ENST00000400075 TM4SF20Q53R12 229 aa12.2□□□□□ -0.46
GABPA-202ENST00000400075 EAF1Q96JC9 268 aaPredicted RBP12.2□□□□□ -0.46
GABPA-202ENST00000400075 CTDSP1Q9GZU7 261 aa12.2□□□□□ -0.46
GABPA-202ENST00000400075 DOCK4Q8N1I0 1966 aa12.2□□□□□ -0.46
GABPA-202ENST00000400075 C11orf87Q6NUJ2 197 aa12.2□□□□□ -0.46
GABPA-202ENST00000400075 CABLES2Q9BTV7 478 aa12.2□□□□□ -0.46
GABPA-202ENST00000400075 H3F3CQ6NXT2 135 aa12.2□□□□□ -0.46
GABPA-202ENST00000400075 DDB2Q92466 427 aa12.2□□□□□ -0.46
GABPA-202ENST00000400075 LURAP1Q96LR2 239 aa12.2□□□□□ -0.46
GABPA-202ENST00000400075 KCNK7Q9Y2U2 307 aa12.2□□□□□ -0.46
GABPA-202ENST00000400075 SLC25A15Q9Y619 301 aa12.2□□□□□ -0.46
GABPA-202ENST00000400075 ANKHD1Q8IWZ3 2542 aaKnown RBP12.2□□□□□ -0.46
GABPA-202ENST00000400075 M0QZK8 103 aa12.2□□□□□ -0.46
GABPA-202ENST00000400075 BMPR1BO00238 502 aa12.2□□□□□ -0.46
GABPA-202ENST00000400075 PJVKQ0ZLH3 352 aa12.2□□□□□ -0.46
GABPA-202ENST00000400075 IRF3Q14653 427 aa12.2□□□□□ -0.46
GABPA-202ENST00000400075 FDX2Q6P4F2 183 aa12.2□□□□□ -0.46
GABPA-202ENST00000400075 LINC00114Q6XXX2 140 aa12.2□□□□□ -0.46
GABPA-202ENST00000400075 LINC00312Q9Y6C7 94 aa12.2□□□□□ -0.46
GABPA-202ENST00000400075 PCP4L1A6NKN8 68 aa12.19□□□□□ -0.46
GABPA-202ENST00000400075 CEACAM18A8MTB9 384 aa12.19□□□□□ -0.46
GABPA-202ENST00000400075 IGKV1D-33P01593 117 aa12.19□□□□□ -0.46
GABPA-202ENST00000400075 IGKV1-33P01594 117 aa12.19□□□□□ -0.46
GABPA-202ENST00000400075 PRB1P04280 392 aa12.19□□□□□ -0.46
GABPA-202ENST00000400075 DGAT2L7PQ6IED9 249 aa12.19□□□□□ -0.46
GABPA-202ENST00000400075 OVCH2Q7RTZ1 564 aa12.19□□□□□ -0.46
GABPA-202ENST00000400075 C3orf56Q8N813 242 aa12.19□□□□□ -0.46
GABPA-202ENST00000400075 C10orf113Q5VZT2 155 aa12.19□□□□□ -0.46
GABPA-202ENST00000400075 TEPPQ6URK8 271 aa12.19□□□□□ -0.46
GABPA-202ENST00000400075 C16orf82Q7Z2V1 217 aa12.19□□□□□ -0.46
GABPA-202ENST00000400075 BAGE3Q86Y29 109 aa12.19□□□□□ -0.46
GABPA-202ENST00000400075 BAGE2Q86Y30 109 aa12.19□□□□□ -0.46
GABPA-202ENST00000400075 OR10G4Q8NGN3 311 aa12.19□□□□□ -0.46
GABPA-202ENST00000400075 OR10G9Q8NGN4 311 aa12.19□□□□□ -0.46
GABPA-202ENST00000400075 OR10G7Q8NGN6 311 aa12.19□□□□□ -0.46
GABPA-202ENST00000400075 IGHV3OR16-12A0A075B7B8 117 aa12.19□□□□□ -0.46
GABPA-202ENST00000400075 ZNF705FA8MVS1 300 aaPredicted RBP12.19□□□□□ -0.46
GABPA-202ENST00000400075 HYPMO75409 117 aa12.19□□□□□ -0.46
GABPA-202ENST00000400075 IGHV1-46P01743 117 aa12.19□□□□□ -0.46
GABPA-202ENST00000400075 ZNF705DP0CH99 300 aaPredicted RBP12.19□□□□□ -0.46
GABPA-202ENST00000400075 ZNF705BP0CI00 300 aaPredicted RBP12.19□□□□□ -0.46
GABPA-202ENST00000400075 EEF1AKMT3Q96AZ1 226 aa12.19□□□□□ -0.46
GABPA-202ENST00000400075 Q96M66 194 aa12.19□□□□□ -0.46
GABPA-202ENST00000400075 CTDSPLO15194 276 aa12.18□□□□□ -0.46
GABPA-202ENST00000400075 EFNA2O43921 213 aa12.18□□□□□ -0.46
GABPA-202ENST00000400075 C1QBP02746 253 aa12.18□□□□□ -0.46
GABPA-202ENST00000400075 H3F3AP84243 136 aa12.18□□□□□ -0.46
GABPA-202ENST00000400075 Q5PR19 223 aa12.18□□□□□ -0.46
GABPA-202ENST00000400075 LYZL2Q7Z4W2 148 aa12.18□□□□□ -0.46
GABPA-202ENST00000400075 WBP1Q96G27 269 aa12.18□□□□□ -0.46
GABPA-202ENST00000400075 QTRT1Q9BXR0 403 aaKnown RBP12.18□□□□□ -0.46
GABPA-202ENST00000400075 U3KQ87 197 aa12.18□□□□□ -0.46
GABPA-202ENST00000400075 TANC1Q9C0D5 1861 aa12.18□□□□□ -0.46
GABPA-202ENST00000400075 C20orf202A1L168 122 aa12.18□□□□□ -0.46
GABPA-202ENST00000400075 RRN3P1Q2M238 152 aa12.18□□□□□ -0.46
GABPA-202ENST00000400075 HSD17B13Q7Z5P4 300 aaPredicted RBP12.18□□□□□ -0.46
GABPA-202ENST00000400075 C16orf92Q96LL3 132 aa12.18□□□□□ -0.46
GABPA-202ENST00000400075 TMEM167BQ9NRX6 74 aa12.18□□□□□ -0.46
GABPA-202ENST00000400075 RAG2P55895 527 aa12.18□□□□□ -0.46
GABPA-202ENST00000400075 SPCS3P61009 180 aa12.18□□□□□ -0.46
GABPA-202ENST00000400075 COLCA1Q6ZS62 124 aa12.18□□□□□ -0.46
GABPA-202ENST00000400075 OR4B1Q8NGF8 309 aa12.18□□□□□ -0.46
GABPA-202ENST00000400075 B2MP61769 119 aa12.18□□□□□ -0.46
GABPA-202ENST00000400075 ZNF474Q6S9Z5 364 aaPredicted RBP12.18□□□□□ -0.46
GABPA-202ENST00000400075 MAP1LC3B2A6NCE7 125 aa12.17□□□□□ -0.46
GABPA-202ENST00000400075 KIAA1324LA8MWY0 1029 aaPredicted RBP12.17□□□□□ -0.46
GABPA-202ENST00000400075 KBTBD11O94819 623 aa12.17□□□□□ -0.46
GABPA-202ENST00000400075 CCL3L1P16619 93 aa12.17□□□□□ -0.46
GABPA-202ENST00000400075 RPL30P62888 115 aaKnown RBP12.17□□□□□ -0.46
GABPA-202ENST00000400075 MAP1LC3BQ9GZQ8 125 aa12.17□□□□□ -0.46
GABPA-202ENST00000400075 PRR13Q9NZ81 148 aa12.17□□□□□ -0.46
GABPA-202ENST00000400075 HIGD1AQ9Y241 93 aa12.17□□□□□ -0.46
GABPA-202ENST00000400075 KBTBD11-OT1A0A1B0GTJ5 212 aa12.17□□□□□ -0.46
GABPA-202ENST00000400075 M6PRP20645 277 aa12.17□□□□□ -0.46
GABPA-202ENST00000400075 VDAC2P45880 294 aaPredicted RBP12.17□□□□□ -0.46
GABPA-202ENST00000400075 C11orf44Q8N8P7 122 aa12.17□□□□□ -0.46
GABPA-202ENST00000400075 ADAD2Q8NCV1 583 aaKnown RBP12.17□□□□□ -0.46
GABPA-202ENST00000400075 BOLA1Q9Y3E2 137 aa12.17□□□□□ -0.46
GABPA-202ENST00000400075 DUXBA0A1W2PPF3 345 aa12.17□□□□□ -0.46
GABPA-202ENST00000400075 RNF223E7ERA6 249 aa12.17□□□□□ -0.46
GABPA-202ENST00000400075 WISP1O95388 367 aa12.17□□□□□ -0.46
GABPA-202ENST00000400075 RAX2Q96IS3 184 aa12.17□□□□□ -0.46
GABPA-202ENST00000400075 FBXL15Q9H469 300 aa12.17□□□□□ -0.46
GABPA-202ENST00000400075 CRYGSP22914 178 aa12.17□□□□□ -0.46
GABPA-202ENST00000400075 HSPE1P61604 102 aaKnown RBP12.17□□□□□ -0.46
GABPA-202ENST00000400075 SELENOTP62341 195 aa12.17□□□□□ -0.46
GABPA-202ENST00000400075 CXorf58Q96LI9 332 aa12.17□□□□□ -0.46
GABPA-202ENST00000400075 AKIP1Q9NQ31 210 aa12.17□□□□□ -0.46
GABPA-202ENST00000400075 TMEM140Q9NV12 185 aa12.17□□□□□ -0.46
GABPA-202ENST00000400075 FREM3P0C091 2139 aa12.17□□□□□ -0.46
GABPA-202ENST00000400075 TRAV30A0A087WSZ9 112 aa12.16□□□□□ -0.46
GABPA-202ENST00000400075 A6NNC1 897 aa12.16□□□□□ -0.46
GABPA-202ENST00000400075 MPC2O95563 127 aa12.16□□□□□ -0.46
GABPA-202ENST00000400075 HLA-GP17693 338 aa12.16□□□□□ -0.46
GABPA-202ENST00000400075 ZNF137PP52743 207 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms