RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 ANOS1P23352 680 aa11.83□□□□□ -0.52
SCAF4-202ENST00000399804 FGF8P55075 233 aaPredicted RBP11.83□□□□□ -0.52
SCAF4-202ENST00000399804 UBE2G2P60604 165 aa11.83□□□□□ -0.52
SCAF4-202ENST00000399804 SUPT4H1P63272 117 aaKnown RBP11.83□□□□□ -0.52
SCAF4-202ENST00000399804 LILRB1Q8NHL6 650 aaPredicted RBP11.83□□□□□ -0.52
SCAF4-202ENST00000399804 GTF3AQ92664 365 aaKnown RBP11.83□□□□□ -0.52
SCAF4-202ENST00000399804 RPH3ALQ9UNE2 315 aa11.83□□□□□ -0.52
SCAF4-202ENST00000399804 MAP1LC3B2A6NCE7 125 aa11.83□□□□□ -0.52
SCAF4-202ENST00000399804 SCAF4O95104 1147 aaKnown RBP11.83□□□□□ -0.52
SCAF4-202ENST00000399804 LY86O95711 162 aa11.83□□□□□ -0.52
SCAF4-202ENST00000399804 LURAP1Q96LR2 239 aa11.83□□□□□ -0.52
SCAF4-202ENST00000399804 MAP1LC3BQ9GZQ8 125 aa11.83□□□□□ -0.52
SCAF4-202ENST00000399804 WSB1Q9Y6I7 421 aa11.83□□□□□ -0.52
SCAF4-202ENST00000399804 ATP6V1FQ16864 119 aa11.82□□□□□ -0.52
SCAF4-202ENST00000399804 UBAC2Q8NBM4 344 aa11.82□□□□□ -0.52
SCAF4-202ENST00000399804 CLRN3Q8NCR9 226 aa11.82□□□□□ -0.52
SCAF4-202ENST00000399804 FLYWCH2Q96CP2 140 aaKnown RBP11.82□□□□□ -0.52
SCAF4-202ENST00000399804 JPT1Q9UK76 154 aa11.82□□□□□ -0.52
SCAF4-202ENST00000399804 H0YIZ8 118 aa11.82□□□□□ -0.52
SCAF4-202ENST00000399804 ATXN7O15265 892 aaPredicted RBP11.82□□□□□ -0.52
SCAF4-202ENST00000399804 PSPNO60542 156 aa11.82□□□□□ -0.52
SCAF4-202ENST00000399804 MUC1P15941 1255 aaPredicted RBP11.82□□□□□ -0.52
SCAF4-202ENST00000399804 ZNF561Q8N587 486 aa11.82□□□□□ -0.52
SCAF4-202ENST00000399804 FRZBQ92765 325 aa11.82□□□□□ -0.52
SCAF4-202ENST00000399804 RNF126Q9BV68 326 aa11.82□□□□□ -0.52
SCAF4-202ENST00000399804 INSIG2Q9Y5U4 225 aa11.82□□□□□ -0.52
SCAF4-202ENST00000399804 F12P00748 615 aaPredicted RBP11.82□□□□□ -0.52
SCAF4-202ENST00000399804 IGKV3-15P01624 115 aa11.82□□□□□ -0.52
SCAF4-202ENST00000399804 RAB4BP61018 213 aa11.82□□□□□ -0.52
SCAF4-202ENST00000399804 IGFL3Q6UXB1 125 aa11.82□□□□□ -0.52
SCAF4-202ENST00000399804 IL22RA2Q969J5 263 aa11.82□□□□□ -0.52
SCAF4-202ENST00000399804 BIN3Q9NQY0 253 aa11.82□□□□□ -0.52
SCAF4-202ENST00000399804 FKBP11Q9NYL4 201 aa11.82□□□□□ -0.52
SCAF4-202ENST00000399804 CREBBPQ92793 2442 aa11.81□□□□□ -0.52
SCAF4-202ENST00000399804 C17orf100A8MU93 164 aa11.81□□□□□ -0.52
SCAF4-202ENST00000399804 APOBEC3AP31941 199 aaPredicted RBP11.81□□□□□ -0.52
SCAF4-202ENST00000399804 LY6DQ14210 128 aa11.81□□□□□ -0.52
SCAF4-202ENST00000399804 C9orf152Q5JTZ5 239 aa11.81□□□□□ -0.52
SCAF4-202ENST00000399804 BTNL8Q6UX41 500 aa11.81□□□□□ -0.52
SCAF4-202ENST00000399804 ASCL4Q6XD76 172 aa11.81□□□□□ -0.52
SCAF4-202ENST00000399804 ZNF497Q6ZNH5 498 aa11.81□□□□□ -0.52
SCAF4-202ENST00000399804 SMIM7Q9BQ49 75 aa11.81□□□□□ -0.52
SCAF4-202ENST00000399804 LRP4O75096 1905 aa11.81□□□□□ -0.52
SCAF4-202ENST00000399804 NCBP2LA6PVI3 153 aaKnown RBP11.81□□□□□ -0.52
SCAF4-202ENST00000399804 NAPSAO96009 420 aa11.81□□□□□ -0.52
SCAF4-202ENST00000399804 IGHV1-69-2A0A0G2JMI3 117 aa11.81□□□□□ -0.52
SCAF4-202ENST00000399804 A0A0G2JNJ9 132 aa11.81□□□□□ -0.52
SCAF4-202ENST00000399804 MARCH11A6NNE9 402 aa11.81□□□□□ -0.52
SCAF4-202ENST00000399804 OR10G4Q8NGN3 311 aa11.81□□□□□ -0.52
SCAF4-202ENST00000399804 OR10G9Q8NGN4 311 aa11.81□□□□□ -0.52
SCAF4-202ENST00000399804 OR10G7Q8NGN6 311 aa11.81□□□□□ -0.52
SCAF4-202ENST00000399804 VSTM2AQ8TAG5 236 aa11.81□□□□□ -0.52
SCAF4-202ENST00000399804 IDI2-AS1Q9NZ38 188 aa11.81□□□□□ -0.52
SCAF4-202ENST00000399804 Q9UFV3 132 aa11.81□□□□□ -0.52
SCAF4-202ENST00000399804 MSRB2Q9Y3D2 182 aa11.81□□□□□ -0.52
SCAF4-202ENST00000399804 B9A039 149 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 OPRK1P41145 380 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 RND3P61587 244 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 CBLN2Q8IUK8 224 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 VKORC1L1Q8N0U8 176 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 TCTEX1D1Q8N7M0 179 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 VKORC1Q9BQB6 163 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 REG4Q9BYZ8 158 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 SLC35B3Q9H1N7 401 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 LYRM2Q9NU23 88 aaPredicted RBP11.8□□□□□ -0.52
SCAF4-202ENST00000399804 TMEM106BQ9NUM4 274 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 ATRXP46100 2492 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 IGHV3-72A0A0B4J1Y9 119 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 PITX3O75364 302 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 IGLV3-1P01715 115 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 MT-ND4LP03901 98 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 SULT1A2P50226 295 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 ZNF146Q15072 292 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 RPL39P5Q59GN2 51 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 MALSU1Q96EH3 234 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 RSG1Q9BU20 258 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 EML6Q6ZMW3 1958 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.8□□□□□ -0.52
SCAF4-202ENST00000399804 MLNRO43193 412 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 MMP9P14780 707 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 RAB13P51153 203 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 C12orf57Q99622 126 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 CRIM1Q9NZV1 1036 aa11.8□□□□□ -0.52
SCAF4-202ENST00000399804 WIPF3A6NGB9 483 aa11.79□□□□□ -0.52
SCAF4-202ENST00000399804 J3QR06 171 aa11.79□□□□□ -0.52
SCAF4-202ENST00000399804 PRR30Q53SZ7 412 aaPredicted RBP11.79□□□□□ -0.52
SCAF4-202ENST00000399804 MYPOPQ86VE0 399 aaPredicted RBP11.79□□□□□ -0.52
SCAF4-202ENST00000399804 DMRTA2Q96SC8 542 aa11.79□□□□□ -0.52
SCAF4-202ENST00000399804 PARP11Q9NR21 331 aa11.79□□□□□ -0.52
SCAF4-202ENST00000399804 TNFSF13O75888 250 aa11.79□□□□□ -0.52
SCAF4-202ENST00000399804 YIF1AO95070 293 aa11.79□□□□□ -0.52
SCAF4-202ENST00000399804 OR2C1O95371 312 aa11.79□□□□□ -0.52
SCAF4-202ENST00000399804 LSM10Q969L4 123 aaKnown RBP11.79□□□□□ -0.52
SCAF4-202ENST00000399804 RBKSQ9H477 322 aa11.79□□□□□ -0.52
SCAF4-202ENST00000399804 PRNDQ9UKY0 176 aa11.79□□□□□ -0.52
SCAF4-202ENST00000399804 AUP1Q9Y679 476 aa11.79□□□□□ -0.52
SCAF4-202ENST00000399804 K7EM74 188 aa11.79□□□□□ -0.52
SCAF4-202ENST00000399804 DAOP14920 347 aa11.79□□□□□ -0.52
SCAF4-202ENST00000399804 GPR6P46095 362 aaPredicted RBP11.79□□□□□ -0.52
SCAF4-202ENST00000399804 SSMEM1Q8WWF3 244 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms