RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 TMEM127O75204 238 aa11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 SNRPBP14678 240 aaKnown RBP11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 CD36P16671 472 aa11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 LINC00205P59089 165 aa11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 RPS16P62249 146 aaKnown RBP11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 TMEM267Q0VDI3 215 aaPredicted RBP11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 KIAA0141Q14154 515 aaPredicted RBP11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 NEDD8Q15843 81 aa11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 DEFB136Q30KP8 78 aa11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 ZNF562Q6V9R5 426 aa11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 H1FOOQ8IZA3 346 aaPredicted RBP11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 ZNF491Q8N8L2 437 aa11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 FLYWCH2Q96CP2 140 aaKnown RBP11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 DUX3Q96PT4 197 aa11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 KLK15Q9H2R5 256 aa11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 SLC35D1Q9NTN3 355 aa11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 RHBDL2Q9NX52 303 aa11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 METTL1Q9UBP6 276 aaKnown RBP11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 ELF5Q9UKW6 265 aaPredicted RBP11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 FOXA2Q9Y261 457 aaPredicted RBP11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 VSIG4Q9Y279 399 aa11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 NUBP2Q9Y5Y2 271 aa11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 ETV7Q9Y603 341 aa11.59□□□□□ -0.55
SMIM11A-203ENST00000399299 IGKV1D-8A0A087WSZ0 117 aa11.58□□□□□ -0.56
SMIM11A-203ENST00000399299 FCN1O00602 326 aa11.58□□□□□ -0.56
SMIM11A-203ENST00000399299 CTXN2P0C2S0 81 aa11.58□□□□□ -0.56
SMIM11A-203ENST00000399299 LGALS7P47929 136 aa11.58□□□□□ -0.56
SMIM11A-203ENST00000399299 RAB9AP51151 201 aa11.58□□□□□ -0.56
SMIM11A-203ENST00000399299 KRTAP10-11P60412 298 aa11.58□□□□□ -0.56
SMIM11A-203ENST00000399299 ECSCRQ19T08 205 aa11.58□□□□□ -0.56
SMIM11A-203ENST00000399299 TIMM50Q3ZCQ8 353 aa11.58□□□□□ -0.56
SMIM11A-203ENST00000399299 ZNF260Q3ZCT1 412 aa11.58□□□□□ -0.56
SMIM11A-203ENST00000399299 AKIRIN2Q53H80 203 aa11.58□□□□□ -0.56
SMIM11A-203ENST00000399299 OR5M8Q8NGP6 311 aa11.58□□□□□ -0.56
SMIM11A-203ENST00000399299 C5orf30Q96GV9 206 aa11.58□□□□□ -0.56
SMIM11A-203ENST00000399299 ZMAT5Q9UDW3 170 aaKnown RBP11.58□□□□□ -0.56
SMIM11A-203ENST00000399299 COL7A1Q02388 2944 aa11.57□□□□□ -0.56
SMIM11A-203ENST00000399299 LOC100506127A0A0U1RQW1 187 aa11.57□□□□□ -0.56
SMIM11A-203ENST00000399299 A0A1W2PN81 502 aa11.57□□□□□ -0.56
SMIM11A-203ENST00000399299 TMEM235A6NFC5 223 aa11.57□□□□□ -0.56
SMIM11A-203ENST00000399299 I3L521 148 aa11.57□□□□□ -0.56
SMIM11A-203ENST00000399299 K7EIL1 84 aa11.57□□□□□ -0.56
SMIM11A-203ENST00000399299 SOX15O60248 233 aa11.57□□□□□ -0.56
SMIM11A-203ENST00000399299 CLEC2LP0C7M8 214 aa11.57□□□□□ -0.56
SMIM11A-203ENST00000399299 RRASP10301 218 aa11.57□□□□□ -0.56
SMIM11A-203ENST00000399299 EGR2P11161 476 aaPredicted RBP11.57□□□□□ -0.56
SMIM11A-203ENST00000399299 HOXD3P31249 432 aaPredicted RBP11.57□□□□□ -0.56
SMIM11A-203ENST00000399299 CHRNA7P36544 502 aa11.57□□□□□ -0.56
SMIM11A-203ENST00000399299 RAB25P57735 213 aa11.57□□□□□ -0.56
SMIM11A-203ENST00000399299 MXD1Q05195 221 aa11.57□□□□□ -0.56
SMIM11A-203ENST00000399299 CBX3Q13185 183 aa11.57□□□□□ -0.56
SMIM11A-203ENST00000399299 PYHIN1Q6K0P9 492 aa11.57□□□□□ -0.56
SMIM11A-203ENST00000399299 OR11H1Q8NG94 326 aa11.57□□□□□ -0.56
SMIM11A-203ENST00000399299 ADTRPQ96IZ2 230 aa11.57□□□□□ -0.56
SMIM11A-203ENST00000399299 RNF167Q9H6Y7 350 aa11.57□□□□□ -0.56
SMIM11A-203ENST00000399299 GNB4Q9HAV0 340 aa11.57□□□□□ -0.56
SMIM11A-203ENST00000399299 RBM7Q9Y580 266 aaKnown RBP11.57□□□□□ -0.56
SMIM11A-203ENST00000399299 A0A0A6YYH2 397 aa11.56□□□□□ -0.56
SMIM11A-203ENST00000399299 A6NJ64 397 aa11.56□□□□□ -0.56
SMIM11A-203ENST00000399299 SLC25A17O43808 307 aa11.56□□□□□ -0.56
SMIM11A-203ENST00000399299 CA2P00918 260 aa11.56□□□□□ -0.56
SMIM11A-203ENST00000399299 IGLV2-23P01705 113 aa11.56□□□□□ -0.56
SMIM11A-203ENST00000399299 GNG2P59768 71 aa11.56□□□□□ -0.56
SMIM11A-203ENST00000399299 RTL8BQ17RB0 113 aa11.56□□□□□ -0.56
SMIM11A-203ENST00000399299 TMEM177Q53S58 311 aa11.56□□□□□ -0.56
SMIM11A-203ENST00000399299 CNIH2Q6PI25 160 aa11.56□□□□□ -0.56
SMIM11A-203ENST00000399299 PPP1R27Q86WC6 154 aa11.56□□□□□ -0.56
SMIM11A-203ENST00000399299 ABHD5Q8WTS1 349 aa11.56□□□□□ -0.56
SMIM11A-203ENST00000399299 NUDCD2Q8WVJ2 157 aa11.56□□□□□ -0.56
SMIM11A-203ENST00000399299 ARPC1AQ92747 370 aa11.56□□□□□ -0.56
SMIM11A-203ENST00000399299 SLC25A38Q96DW6 304 aa11.56□□□□□ -0.56
SMIM11A-203ENST00000399299 SSX5O60225 188 aa11.55□□□□□ -0.56
SMIM11A-203ENST00000399299 SLC22A5O76082 557 aa11.55□□□□□ -0.56
SMIM11A-203ENST00000399299 TNFAIP8O95379 198 aa11.55□□□□□ -0.56
SMIM11A-203ENST00000399299 CRYGBP07316 175 aa11.55□□□□□ -0.56
SMIM11A-203ENST00000399299 OR8U8P0C7N1 319 aa11.55□□□□□ -0.56
SMIM11A-203ENST00000399299 DUTP33316 252 aaKnown RBP11.55□□□□□ -0.56
SMIM11A-203ENST00000399299 ZNF616Q08AN1 781 aa11.55□□□□□ -0.56
SMIM11A-203ENST00000399299 ACTBL2Q562R1 376 aa11.55□□□□□ -0.56
SMIM11A-203ENST00000399299 IDNKQ5T6J7 187 aa11.55□□□□□ -0.56
SMIM11A-203ENST00000399299 C9orf66Q5T8R8 295 aa11.55□□□□□ -0.56
SMIM11A-203ENST00000399299 UNQ5815/PRO19632Q6UWF5 114 aa11.55□□□□□ -0.56
SMIM11A-203ENST00000399299 OR5H6Q8NGV6 325 aa11.55□□□□□ -0.56
SMIM11A-203ENST00000399299 DDB2Q92466 427 aa11.55□□□□□ -0.56
SMIM11A-203ENST00000399299 HARBI1Q96MB7 349 aa11.55□□□□□ -0.56
SMIM11A-203ENST00000399299 CLCC1Q96S66 551 aa11.55□□□□□ -0.56
SMIM11A-203ENST00000399299 ST6GALNAC5Q9BVH7 336 aa11.55□□□□□ -0.56
SMIM11A-203ENST00000399299 VCX3AQ9NNX9 186 aa11.55□□□□□ -0.56
SMIM11A-203ENST00000399299 TPSG1Q9NRR2 321 aa11.55□□□□□ -0.56
SMIM11A-203ENST00000399299 OR2W1Q9Y3N9 320 aa11.55□□□□□ -0.56
SMIM11A-203ENST00000399299 A3GALT2U3KPV4 340 aa11.55□□□□□ -0.56
SMIM11A-203ENST00000399299 A0A087WXM4 84 aa11.54□□□□□ -0.56
SMIM11A-203ENST00000399299 WI2-2373I1.2A0A1W2PRP0 233 aa11.54□□□□□ -0.56
SMIM11A-203ENST00000399299 HLA-DQB1P01920 261 aa11.54□□□□□ -0.56
SMIM11A-203ENST00000399299 LUMP51884 338 aaPredicted RBP11.54□□□□□ -0.56
SMIM11A-203ENST00000399299 GNB1P62873 340 aa11.54□□□□□ -0.56
SMIM11A-203ENST00000399299 SSBP2P81877 361 aaPredicted RBP11.54□□□□□ -0.56
SMIM11A-203ENST00000399299 CROCCP3Q8IVE0 287 aa11.54□□□□□ -0.56
SMIM11A-203ENST00000399299 ZNF645Q8N7E2 425 aa11.54□□□□□ -0.56
SMIM11A-203ENST00000399299 BVESQ8NE79 360 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms