RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 CDC34P49427 236 aaPredicted RBP11.77□□□□□ -0.53
APOB-202ENST00000399256 FAM53AQ6NSI3 398 aaPredicted RBP11.77□□□□□ -0.53
APOB-202ENST00000399256 TMEM144Q7Z5S9 345 aa11.77□□□□□ -0.53
APOB-202ENST00000399256 ZNF808Q8N4W9 903 aaPredicted RBP11.77□□□□□ -0.53
APOB-202ENST00000399256 SGMS2Q8NHU3 365 aa11.77□□□□□ -0.53
APOB-202ENST00000399256 CMTM2Q8TAZ6 248 aa11.77□□□□□ -0.53
APOB-202ENST00000399256 PARD6AQ9NPB6 346 aa11.77□□□□□ -0.53
APOB-202ENST00000399256 HSPB7Q9UBY9 170 aa11.77□□□□□ -0.53
APOB-202ENST00000399256 U3KQA8 63 aa11.77□□□□□ -0.53
APOB-202ENST00000399256 ZDBF2Q9HCK1 2354 aa11.77□□□□□ -0.53
APOB-202ENST00000399256 IGHV3-64DA0A0J9YX35 117 aa11.77□□□□□ -0.53
APOB-202ENST00000399256 FAM90A26D6RGX4 464 aa11.77□□□□□ -0.53
APOB-202ENST00000399256 IRF2P14316 349 aa11.77□□□□□ -0.53
APOB-202ENST00000399256 TMPRSS7Q7RTY8 843 aa11.77□□□□□ -0.53
APOB-202ENST00000399256 NUFIP2Q7Z417 695 aaKnown RBP11.77□□□□□ -0.53
APOB-202ENST00000399256 AGBL5Q8NDL9 886 aa11.77□□□□□ -0.53
APOB-202ENST00000399256 GOLT1BQ9Y3E0 138 aa11.77□□□□□ -0.53
APOB-202ENST00000399256 TRAV38-1A0A0B4J264 116 aa11.76□□□□□ -0.53
APOB-202ENST00000399256 ODAMA1E959 279 aa11.76□□□□□ -0.53
APOB-202ENST00000399256 ANKRD30BLA7E2S9 258 aa11.76□□□□□ -0.53
APOB-202ENST00000399256 PMS2P5A8MQ11 134 aa11.76□□□□□ -0.53
APOB-202ENST00000399256 NPIPB11E5RHQ5 1161 aa11.76□□□□□ -0.53
APOB-202ENST00000399256 M0R296 226 aa11.76□□□□□ -0.53
APOB-202ENST00000399256 DLEU1O43261 78 aa11.76□□□□□ -0.53
APOB-202ENST00000399256 KLF7O75840 302 aaPredicted RBP11.76□□□□□ -0.53
APOB-202ENST00000399256 CA6P23280 308 aa11.76□□□□□ -0.53
APOB-202ENST00000399256 BATFQ16520 125 aa11.76□□□□□ -0.53
APOB-202ENST00000399256 PMS2CLQ68D20 193 aa11.76□□□□□ -0.53
APOB-202ENST00000399256 C1orf210Q8IVY1 113 aa11.76□□□□□ -0.53
APOB-202ENST00000399256 IMMP2LQ96T52 175 aa11.76□□□□□ -0.53
APOB-202ENST00000399256 TMEM204Q9BSN7 226 aa11.76□□□□□ -0.53
APOB-202ENST00000399256 GDF1P27539 372 aa11.76□□□□□ -0.53
APOB-202ENST00000399256 ATP6V1FQ16864 119 aa11.76□□□□□ -0.53
APOB-202ENST00000399256 Q6P435 159 aa11.76□□□□□ -0.53
APOB-202ENST00000399256 ZNF573Q86YE8 665 aa11.76□□□□□ -0.53
APOB-202ENST00000399256 TMEM105Q8N8V8 129 aa11.76□□□□□ -0.53
APOB-202ENST00000399256 RBFOX2O43251 390 aaKnown RBP eCLIP11.75□□□□□ -0.533e-8■■□□□ 11.7
APOB-202ENST00000399256 RBMXL2O75526 392 aaKnown RBP11.75□□□□□ -0.53
APOB-202ENST00000399256 SYNGR4O95473 234 aa11.75□□□□□ -0.53
APOB-202ENST00000399256 RPL30P62888 115 aaKnown RBP11.75□□□□□ -0.53
APOB-202ENST00000399256 LYSMD4Q5XG99 296 aa11.75□□□□□ -0.53
APOB-202ENST00000399256 Q6ZWC4 215 aa11.75□□□□□ -0.53
APOB-202ENST00000399256 DTD1Q8TEA8 209 aa11.75□□□□□ -0.53
APOB-202ENST00000399256 ZDHHC11Q9H8X9 412 aa11.75□□□□□ -0.53
APOB-202ENST00000399256 PATZ1Q9HBE1 687 aaKnown RBP11.75□□□□□ -0.53
APOB-202ENST00000399256 ELOVL5Q9NYP7 299 aa11.75□□□□□ -0.53
APOB-202ENST00000399256 FREM2Q5SZK8 3169 aa11.75□□□□□ -0.53
APOB-202ENST00000399256 LRRC30A6NM36 301 aa11.75□□□□□ -0.53
APOB-202ENST00000399256 S1PR2O95136 353 aa11.75□□□□□ -0.53
APOB-202ENST00000399256 GNG3P63215 75 aa11.75□□□□□ -0.53
APOB-202ENST00000399256 ESPL1Q14674 2120 aa11.75□□□□□ -0.53
APOB-202ENST00000399256 C21orf62-AS1Q17RA5 79 aa11.75□□□□□ -0.53
APOB-202ENST00000399256 SPATA46Q5T0L3 261 aa11.75□□□□□ -0.53
APOB-202ENST00000399256 PAM16Q9Y3D7 125 aa11.75□□□□□ -0.53
APOB-202ENST00000399256 OR2H2O95918 312 aa11.75□□□□□ -0.53
APOB-202ENST00000399256 SOX8P57073 446 aa11.75□□□□□ -0.53
APOB-202ENST00000399256 SFRP2Q96HF1 295 aa11.75□□□□□ -0.53
APOB-202ENST00000399256 DEPPQ9NTK1 212 aa11.75□□□□□ -0.53
APOB-202ENST00000399256 TMEM106BQ9NUM4 274 aa11.75□□□□□ -0.53
APOB-202ENST00000399256 MDFIC2A0A1B0GVS7 189 aa11.74□□□□□ -0.53
APOB-202ENST00000399256 PINLYPA6NC86 204 aa11.74□□□□□ -0.53
APOB-202ENST00000399256 CDKN1AP38936 164 aa11.74□□□□□ -0.53
APOB-202ENST00000399256 MSMO1Q15800 293 aa11.74□□□□□ -0.53
APOB-202ENST00000399256 ZNF497Q6ZNH5 498 aa11.74□□□□□ -0.53
APOB-202ENST00000399256 OR2D2Q9H210 308 aa11.74□□□□□ -0.53
APOB-202ENST00000399256 TP53TG3Q9ULZ0 132 aa11.74□□□□□ -0.53
APOB-202ENST00000399256 TNRC6AQ8NDV7 1962 aaKnown RBP11.74□□□□□ -0.53
APOB-202ENST00000399256 RNF212BA8MTL3 300 aa11.74□□□□□ -0.53
APOB-202ENST00000399256 F6UZH7 168 aa11.74□□□□□ -0.53
APOB-202ENST00000399256 CBLN1P23435 193 aa11.74□□□□□ -0.53
APOB-202ENST00000399256 CD82P27701 267 aa11.74□□□□□ -0.53
APOB-202ENST00000399256 THBS3P49746 956 aa11.74□□□□□ -0.53
APOB-202ENST00000399256 EDDM3BP56851 147 aa11.74□□□□□ -0.53
APOB-202ENST00000399256 TUSC5Q8IXB3 177 aa11.74□□□□□ -0.53
APOB-202ENST00000399256 C5orf30Q96GV9 206 aa11.74□□□□□ -0.53
APOB-202ENST00000399256 FRYLO94915 3013 aa11.74□□□□□ -0.53
APOB-202ENST00000399256 CACNA1EQ15878 2313 aa11.74□□□□□ -0.53
APOB-202ENST00000399256 PDE6DO43924 150 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 SFTPCP11686 197 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 CCL4P13236 92 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 MCEMP1Q8IX19 187 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 DIRC2Q96SL1 478 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.73□□□□□ -0.53
APOB-202ENST00000399256 RYDENQ9NUL5 291 aaKnown RBP11.73□□□□□ -0.53
APOB-202ENST00000399256 TRBV20OR9-2A0A075B6H5 130 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 C17orf112F2Z3M2 114 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 M0QZK8 103 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 TMPRSS2O15393 492 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 CD99P14209 185 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 RELQ04864 619 aaPredicted RBP11.73□□□□□ -0.53
APOB-202ENST00000399256 FOXL1Q12952 345 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 MOB1BQ7L9L4 216 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 HSPB9Q9BQS6 159 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 OR5B21A6NL26 309 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 C17orf98A8MV24 154 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 SS18L1O75177 396 aaPredicted RBP11.73□□□□□ -0.53
APOB-202ENST00000399256 CYC1P08574 325 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 SELEP16581 610 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 KITLGP21583 273 aa11.73□□□□□ -0.53
APOB-202ENST00000399256 EPHA8P29322 1005 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms