RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 TMEM91Q6ZNR0 172 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 SLC16A13Q7RTY0 426 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 IDI2-AS1Q9NZ38 188 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 COL4A6Q14031 1691 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 THADAQ6YHU6 1953 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 TMEM189A5PLL7 270 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 WNT9BO14905 357 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 SYNGR3O43761 229 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 DPPA3Q6W0C5 159 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 ZNF502Q8TBZ5 544 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 KLF14Q8TD94 323 aaPredicted RBP12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 IGHV3-23P01764 117 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 FGF12P61328 243 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 RUNX1Q01196 453 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 PNRC1Q12796 327 aaPredicted RBP12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 CBLN2Q8IUK8 224 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 WFDC6Q9BQY6 131 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 PXMP4Q9Y6I8 212 aa12.22□□□□□ -0.45
PCDHA11-201ENST00000398640 TANC1Q9C0D5 1861 aa12.21□□□□□ -0.45
PCDHA11-201ENST00000398640 ISLRO14498 428 aa12.21□□□□□ -0.45
PCDHA11-201ENST00000398640 RNASE1P07998 156 aaKnown RBP12.21□□□□□ -0.45
PCDHA11-201ENST00000398640 CELA3AP09093 270 aa12.21□□□□□ -0.45
PCDHA11-201ENST00000398640 FCGR2BP31994 310 aaPredicted RBP12.21□□□□□ -0.45
PCDHA11-201ENST00000398640 SSTR5P35346 364 aa12.21□□□□□ -0.45
PCDHA11-201ENST00000398640 LYRM7Q5U5X0 104 aa12.21□□□□□ -0.45
PCDHA11-201ENST00000398640 MIEN1Q9BRT3 115 aa12.21□□□□□ -0.45
PCDHA11-201ENST00000398640 SLC25A17O43808 307 aa12.21□□□□□ -0.45
PCDHA11-201ENST00000398640 ZNF645Q8N7E2 425 aa12.21□□□□□ -0.45
PCDHA11-201ENST00000398640 GCSAMQ8N6F7 178 aa12.21□□□□□ -0.46
PCDHA11-201ENST00000398640 MRPL30Q8TCC3 161 aaKnown RBP12.21□□□□□ -0.46
PCDHA11-201ENST00000398640 IGHV3-35A0A0C4DH35 117 aa12.21□□□□□ -0.46
PCDHA11-201ENST00000398640 DXOO77932 396 aaKnown RBP12.21□□□□□ -0.46
PCDHA11-201ENST00000398640 ATP6V0CP27449 155 aa12.21□□□□□ -0.46
PCDHA11-201ENST00000398640 APOBEC3AP31941 199 aaPredicted RBP12.21□□□□□ -0.46
PCDHA11-201ENST00000398640 B9A039 149 aa12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 BET1LQ9NYM9 111 aa12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 UNC13CQ8NB66 2214 aa12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 H3BQ15 152 aa12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 H7C2G1 150 aa12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 PGA5P0DJD9 388 aa12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 MAS1LP35410 378 aa12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 MARS2Q96GW9 593 aaKnown RBP12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 ZIC3O60481 467 aa12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 KLF7O75840 302 aaPredicted RBP12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 IMMP1LQ96LU5 166 aa12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 PRSS27Q9BQR3 290 aa12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 HSPB8Q9UJY1 196 aa12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 CDS2O95674 445 aa12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 F12P00748 615 aaPredicted RBP12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 GNLYP22749 145 aa12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 RPL24P83731 157 aaKnown RBP12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 RNASE6Q93091 150 aaKnown RBP12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 RALYQ9UKM9 306 aaKnown RBP12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 CTXND1A0A1B0GTU2 59 aa12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 LIPFP07098 398 aa12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 LINC00869P0C866 280 aa12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 IRF3Q14653 427 aa12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 CALHM1Q8IU99 346 aa12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 AMELYQ99218 206 aa12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 KNTC1P50748 2209 aa12.2□□□□□ -0.46
PCDHA11-201ENST00000398640 A0A0U1RQV5 110 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 MMP9P14780 707 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 MC5RP33032 325 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 GZMMP51124 257 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 NPVFQ9HCQ7 196 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 SIGLEC5O15389 551 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 HTN3P15516 51 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 MDKP21741 143 aaPredicted RBP12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 NMUP48645 174 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 RPL8P62917 257 aaKnown RBP12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 APCDD1LQ8NCL9 501 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 SLC25A33Q9BSK2 321 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 RSG1Q9BU20 258 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 KCNK7Q9Y2U2 307 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 PCM1Q15154 2024 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 NDUFA2O43678 99 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 EIF3GO75821 320 aaKnown RBP eCLIP12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 RFPL3SP0C7P2 107 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 SYT8Q8NBV8 401 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 RBKSQ9H477 322 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 CHCHD2Q9Y6H1 151 aaPredicted RBP12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 BSPH1Q075Z2 132 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 FAM209AQ5JX71 171 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 OR5AU1Q8NGC0 362 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 C17orf51A8MQB3 221 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 TMEM262E9PQX1 116 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 H3BTX0 84 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 AP4M1O00189 453 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 PITX3O75364 302 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 CALYQ9NYX4 217 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 TMEM56-RWDD3S4R434 201 aa12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 RP1L1Q8IWN7 2480 aaPredicted RBP12.19□□□□□ -0.46
PCDHA11-201ENST00000398640 C1QTNF9BB2RNN3 333 aa12.18□□□□□ -0.46
PCDHA11-201ENST00000398640 C1QTNF9P0C862 333 aa12.18□□□□□ -0.46
PCDHA11-201ENST00000398640 SUCLG1P53597 346 aaKnown RBP12.18□□□□□ -0.46
PCDHA11-201ENST00000398640 FAM53AQ6NSI3 398 aaPredicted RBP12.18□□□□□ -0.46
PCDHA11-201ENST00000398640 VKORC1L1Q8N0U8 176 aa12.18□□□□□ -0.46
PCDHA11-201ENST00000398640 PACRGQ96M98 296 aaPredicted RBP12.18□□□□□ -0.46
PCDHA11-201ENST00000398640 SSBP3Q9BWW4 388 aaPredicted RBP12.18□□□□□ -0.46
PCDHA11-201ENST00000398640 OPN4Q9UHM6 478 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 203.2 ms