RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 NGFRP08138 427 aa10.15□□□□□ -0.78
TMF1-201ENST00000398559 RPL8P62917 257 aaKnown RBP10.15□□□□□ -0.78
TMF1-201ENST00000398559 TMEM136Q6ZRR5 245 aa10.15□□□□□ -0.78
TMF1-201ENST00000398559 OPN3Q9H1Y3 402 aaPredicted RBP10.15□□□□□ -0.78
TMF1-201ENST00000398559 NPDC1Q9NQX5 325 aaPredicted RBP10.15□□□□□ -0.78
TMF1-201ENST00000398559 ADAMTSL1Q8N6G6 1762 aa10.15□□□□□ -0.78
TMF1-201ENST00000398559 PIN1P1O15428 100 aa10.15□□□□□ -0.78
TMF1-201ENST00000398559 CRYBB3P26998 211 aa10.15□□□□□ -0.78
TMF1-201ENST00000398559 RPS11P62280 158 aaKnown RBP eCLIP10.15□□□□□ -0.78
TMF1-201ENST00000398559 APCDD1LQ8NCL9 501 aa10.15□□□□□ -0.78
TMF1-201ENST00000398559 METTL26Q96S19 204 aa10.15□□□□□ -0.78
TMF1-201ENST00000398559 MRPL13Q9BYD1 178 aaKnown RBP10.15□□□□□ -0.78
TMF1-201ENST00000398559 SIPA1L3O60292 1781 aaPredicted RBP10.15□□□□□ -0.78
TMF1-201ENST00000398559 ARFGEF1Q9Y6D6 1849 aa10.15□□□□□ -0.78
TMF1-201ENST00000398559 MYO16Q9Y6X6 1858 aa10.15□□□□□ -0.78
TMF1-201ENST00000398559 SS18L1O75177 396 aaPredicted RBP10.15□□□□□ -0.78
TMF1-201ENST00000398559 RNASE1P07998 156 aaKnown RBP10.15□□□□□ -0.78
TMF1-201ENST00000398559 FCGR2BP31994 310 aaPredicted RBP10.15□□□□□ -0.78
TMF1-201ENST00000398559 TNFRSF9Q07011 255 aa10.15□□□□□ -0.78
TMF1-201ENST00000398559 SMAGPQ0VAQ4 97 aa10.15□□□□□ -0.78
TMF1-201ENST00000398559 TM4SF20Q53R12 229 aa10.15□□□□□ -0.78
TMF1-201ENST00000398559 FAM206AQ9NX38 181 aa10.15□□□□□ -0.78
TMF1-201ENST00000398559 MPV17P39210 176 aa10.15□□□□□ -0.78
TMF1-201ENST00000398559 FHITP49789 147 aa10.15□□□□□ -0.78
TMF1-201ENST00000398559 SELENOTP62341 195 aa10.15□□□□□ -0.78
TMF1-201ENST00000398559 EBLN2Q6P2I7 272 aa10.15□□□□□ -0.78
TMF1-201ENST00000398559 ARID1AO14497 2285 aa10.15□□□□□ -0.79
TMF1-201ENST00000398559 C7orf71A4D174 169 aa10.15□□□□□ -0.79
TMF1-201ENST00000398559 LEMD1Q68G75 181 aa10.15□□□□□ -0.79
TMF1-201ENST00000398559 SF3B6Q9Y3B4 125 aaKnown RBP10.15□□□□□ -0.79
TMF1-201ENST00000398559 SLC25A53Q5H9E4 307 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 SRSF12Q8WXF0 261 aaKnown RBP10.14□□□□□ -0.79
TMF1-201ENST00000398559 SFRP2Q96HF1 295 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 RAXQ9Y2V3 346 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 GLI3P10071 1580 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 IGHV1-45A0A0A0MS14 117 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 HLA-DRB1P01911 266 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 LY75O60449 1722 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 ATG2BQ96BY7 2078 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 ZIC3O60481 467 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 LGALS3P17931 250 aaKnown RBP10.14□□□□□ -0.79
TMF1-201ENST00000398559 SPSB4Q96A44 273 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 DLL3Q9NYJ7 618 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 LHFPL6Q9Y693 200 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 PATE3B3GLJ2 98 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 ANOS1P23352 680 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 MC5RP33032 325 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 RND2P52198 227 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 ZNF501Q96CX3 271 aaPredicted RBP10.14□□□□□ -0.79
TMF1-201ENST00000398559 SGK494Q96LW2 274 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 DNAJC4Q9NNZ3 241 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 LAMB2P55268 1798 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 MPTX1A8MV57 137 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 TMEM187Q14656 261 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 C1orf185Q5T7R7 199 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 ITLN1Q8WWA0 313 aa10.14□□□□□ -0.79
TMF1-201ENST00000398559 TTC32Q5I0X7 151 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 ZNF818PQ6ZRF7 136 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 S1PR2O95136 353 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 OR10AG1Q8NH19 301 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 ANKRD31Q8N7Z5 1873 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 COL18A1P39060 1754 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 CX3CL1P78423 397 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 UNQ9370/PRO34162Q6UXP9 181 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 ERASQ7Z444 233 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 IDI2-AS1Q9NZ38 188 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 KCNE5Q9UJ90 142 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 CCDC88CQ9P219 2028 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 A0A1W2PQF6 199 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 FAM90A10PA6NDY2 464 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 FAM90A18PA6NE21 464 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 FAM90A16PA6NEW6 464 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 FAM90A20PA6NIJ5 464 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 FAM90A8PA6NJQ4 464 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 FAM90A7PA6NKC0 464 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 FAM90A22PA8MWA6 464 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 FAM90A12PA8MX19 464 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 FAM90A5PA8MXJ8 464 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 FAM90A23PA8MXZ1 464 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 REG1AP05451 166 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 FAM90A15PP0C7V4 464 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 FAM90A13PP0C7W8 464 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 FAM90A14PP0C7W9 464 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 FAM90A24PP0C7X0 464 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 C8orf88P0DMB2 117 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 FAM90A26D6RGX4 464 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 IGHV4-34P06331 123 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 EMP1P54849 157 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 C1orf174Q8IYL3 243 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 POC1AQ8NBT0 407 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 KLK15Q9H2R5 256 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 PILRAQ9UKJ1 303 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 PHLDA3Q9Y5J5 127 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 SPAG17Q6Q759 2223 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 NPIPB6E9PJ23 425 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 RBFOX2O43251 390 aaKnown RBP eCLIP10.13□□□□□ -0.79
TMF1-201ENST00000398559 DUSP15Q9H1R2 295 aaPredicted RBP10.13□□□□□ -0.79
TMF1-201ENST00000398559 G6PC2Q9NQR9 355 aa10.13□□□□□ -0.79
TMF1-201ENST00000398559 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.12□□□□□ -0.79
TMF1-201ENST00000398559 H3BTX0 84 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms