RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 MRPL30Q8TCC3 161 aaKnown RBP9.28□□□□□ -0.92
TFF3-202ENST00000398431 CASTOR1Q8WTX7 329 aa9.28□□□□□ -0.92
TFF3-202ENST00000398431 ZNF251Q9BRH9 671 aa9.28□□□□□ -0.92
TFF3-202ENST00000398431 RAB9BQ9NP90 201 aa9.28□□□□□ -0.92
TFF3-202ENST00000398431 PARP11Q9NR21 331 aa9.28□□□□□ -0.92
TFF3-202ENST00000398431 RABL2AQ9UBK7 228 aaPredicted RBP9.28□□□□□ -0.92
TFF3-202ENST00000398431 RABL2BQ9UNT1 228 aa9.28□□□□□ -0.92
TFF3-202ENST00000398431 MRPS28Q9Y2Q9 187 aaKnown RBP9.28□□□□□ -0.92
TFF3-202ENST00000398431 NUBP2Q9Y5Y2 271 aa9.28□□□□□ -0.92
TFF3-202ENST00000398431 EPPK1P58107 5090 aaKnown RBP9.27□□□□□ -0.93
TFF3-202ENST00000398431 IGHV4OR15-8A0A075B7B6 117 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 A0A087WW49 117 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 LCE6AA0A183 80 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 A0A1W2PPK0 400 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 UBE2QL1A1L167 161 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 HMX3A6NHT5 357 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 FAM25AB3EWG3 89 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 FAM25CB3EWG5 89 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 FAM25GB3EWG6 89 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 LINC01619G3V211 115 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 FCN1O00602 326 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 YPEL1O60688 119 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 SAP30O75446 220 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 CA11O75493 328 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 GLAP06280 429 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 LYL1P12980 280 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 FUT3P21217 361 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 PPP1CCP36873 323 aaKnown RBP9.27□□□□□ -0.93
TFF3-202ENST00000398431 HTD2P86397 168 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 HACD4Q5VWC8 232 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 TRAT1Q6PIZ9 186 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 PLET1Q6UQ28 207 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 NRARPQ7Z6K4 114 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 THRSPQ92748 146 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 Q96M66 194 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 YPEL2Q96QA6 119 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 CITED4Q96RK1 184 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 SDHCQ99643 169 aaPredicted RBP9.27□□□□□ -0.93
TFF3-202ENST00000398431 ABHD14AQ9BUJ0 271 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 SELENOIQ9C0D9 397 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 COMMD3Q9UBI1 195 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 JPT1Q9UK76 154 aa9.27□□□□□ -0.93
TFF3-202ENST00000398431 FAM90A7PA6NKC0 464 aa9.26□□□□□ -0.93
TFF3-202ENST00000398431 CENPXA8MT69 81 aa9.26□□□□□ -0.93
TFF3-202ENST00000398431 FAM90A23PA8MXZ1 464 aa9.26□□□□□ -0.93
TFF3-202ENST00000398431 TMEM127O75204 238 aa9.26□□□□□ -0.93
TFF3-202ENST00000398431 CLEC2LP0C7M8 214 aa9.26□□□□□ -0.93
TFF3-202ENST00000398431 SNRPBP14678 240 aaKnown RBP9.26□□□□□ -0.93
TFF3-202ENST00000398431 MGMTP16455 207 aa9.26□□□□□ -0.93
TFF3-202ENST00000398431 MAPK3P27361 379 aaPredicted RBP9.26□□□□□ -0.93
TFF3-202ENST00000398431 CX3CL1P78423 397 aa9.26□□□□□ -0.93
TFF3-202ENST00000398431 IL18Q14116 193 aa9.26□□□□□ -0.93
TFF3-202ENST00000398431 ZNF79Q15937 498 aa9.26□□□□□ -0.93
TFF3-202ENST00000398431 ZNF660Q6AZW8 331 aaPredicted RBP9.26□□□□□ -0.93
TFF3-202ENST00000398431 CDH26Q8IXH8 852 aa9.26□□□□□ -0.93
TFF3-202ENST00000398431 PHYHIPQ92561 330 aa9.26□□□□□ -0.93
TFF3-202ENST00000398431 ARPC1AQ92747 370 aa9.26□□□□□ -0.93
TFF3-202ENST00000398431 TM2D3Q9BRN9 247 aa9.26□□□□□ -0.93
TFF3-202ENST00000398431 MIXL1Q9H2W2 232 aa9.26□□□□□ -0.93
TFF3-202ENST00000398431 FBXL15Q9H469 300 aa9.26□□□□□ -0.93
TFF3-202ENST00000398431 EDA2RQ9HAV5 297 aa9.26□□□□□ -0.93
TFF3-202ENST00000398431 TBC1D24Q9ULP9 559 aa9.26□□□□□ -0.93
TFF3-202ENST00000398431 SAA2-SAA4A0A096LPE2 208 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 A0A1W2PN81 502 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 SHISA3A0PJX4 238 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 ARL6IP5O75915 188 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 MAS1P04201 325 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 LGALS1P09382 135 aaKnown RBP9.25□□□□□ -0.93
TFF3-202ENST00000398431 SAA2P0DJI9 122 aaPredicted RBP9.25□□□□□ -0.93
TFF3-202ENST00000398431 CT45A6P0DMU7 189 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 CT45A5P0DMU8 189 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 CT45A7P0DMV0 189 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 CHRNA7P36544 502 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 PITPNAQ00169 270 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 BAK1Q16611 211 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 ECSCRQ19T08 205 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 ZFP69Q49AA0 526 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 AWAT2Q6E213 333 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 CNIH2Q6PI25 160 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 CEACAM19Q7Z692 300 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 Q8N402 240 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 JAGN1Q8N5M9 183 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 RHOVQ96L33 236 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 IFI27L2Q9H2X8 130 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 C19orf73Q9NVV2 129 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 KCNIP1Q9NZI2 227 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 GAB2Q9UQC2 676 aa9.25□□□□□ -0.93
TFF3-202ENST00000398431 FOXA2Q9Y261 457 aaPredicted RBP9.25□□□□□ -0.93
TFF3-202ENST00000398431 DNAH1Q9P2D7 4330 aa9.24□□□□□ -0.93
TFF3-202ENST00000398431 BIRC6Q9NR09 4857 aa9.24□□□□□ -0.93
TFF3-202ENST00000398431 A8MZ25 164 aa9.24□□□□□ -0.93
TFF3-202ENST00000398431 RRHO14718 337 aa9.24□□□□□ -0.93
TFF3-202ENST00000398431 PDCD6O75340 191 aa9.24□□□□□ -0.93
TFF3-202ENST00000398431 PROP1O75360 226 aa9.24□□□□□ -0.93
TFF3-202ENST00000398431 HLA-DQB1P01920 261 aa9.24□□□□□ -0.93
TFF3-202ENST00000398431 HSPB1P04792 205 aaKnown RBP9.24□□□□□ -0.93
TFF3-202ENST00000398431 S100A1P23297 94 aa9.24□□□□□ -0.93
TFF3-202ENST00000398431 HLA-DMAP28067 261 aa9.24□□□□□ -0.93
TFF3-202ENST00000398431 MRPS15P82914 257 aaKnown RBP9.24□□□□□ -0.93
TFF3-202ENST00000398431 HMGN3Q15651 99 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms