RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 SCGB1C2P0DMR2 95 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 MEF2BQ02080 365 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-205ENST00000397611 LSM10Q969L4 123 aaKnown RBP4.68□□□□□ -1.66
PTPRD-205ENST00000397611 RBKSQ9H477 322 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 SLC7A10Q9NS82 523 aa4.68□□□□□ -1.66
PTPRD-205ENST00000397611 CHD9Q3L8U1 2897 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 DOCK9Q9BZ29 2069 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 H0Y980 276 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 NEURL1O76050 574 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 RBM11P57052 281 aaKnown RBP4.67□□□□□ -1.66
PTPRD-205ENST00000397611 CXorf66Q5JRM2 361 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-205ENST00000397611 CRIP3Q6Q6R5 217 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 SSMEM1Q8WWF3 244 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 IMMP2LQ96T52 175 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 RAB9BQ9NP90 201 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 SLC45A2Q9UMX9 530 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 FOLR3P41439 243 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 ZNF137PP52743 207 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 WDFY1Q8IWB7 410 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 SHISA5Q8N114 240 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 SLC25A45Q8N413 288 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 NHLRC2Q8NBF2 726 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 OR4P4Q8NGL7 312 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 MAFAQ8NHW3 353 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-205ENST00000397611 APOBEC3DQ96AK3 386 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-205ENST00000397611 C1QTNF5Q9BXJ0 243 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 ASCL3Q9NQ33 180 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 SH2D1BO14796 132 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 OR2J3O76001 311 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 IGHV2-70P01814 119 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 CT45A10P0DMU9 189 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 F2RP25116 425 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 AESQ08117 197 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 PCOLCEQ15113 449 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 HEPN1Q6WQI6 88 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 REPIN1Q9BWE0 567 aaKnown RBP4.67□□□□□ -1.66
PTPRD-205ENST00000397611 C12orf49Q9H741 205 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 TIMM9Q9Y5J7 89 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 CREBBPQ92793 2442 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 MED12Q93074 2177 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 A0A1W2PN81 502 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 IGSF23A1L1A6 192 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 ATXN7O15265 892 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-205ENST00000397611 KIAA1644Q3SXP7 199 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 ZNF774Q6NX45 483 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 Q6ZS52 159 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 CYP2G1PQ6ZSU1 146 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 ZIC4Q8N9L1 334 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 OR5A2Q8NGI9 324 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 RNF2Q99496 336 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 CHODLQ9H9P2 273 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-205ENST00000397611 IGHV3-43A0A0B4J1X8 118 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 CRYABP02511 175 aaKnown RBP4.67□□□□□ -1.66
PTPRD-205ENST00000397611 SLC25A5P05141 298 aaKnown RBP4.67□□□□□ -1.66
PTPRD-205ENST00000397611 IGHV3-43DP0DP04 118 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 RHOBP62745 196 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 JOSD1Q15040 202 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-205ENST00000397611 CENPVQ7Z7K6 275 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-205ENST00000397611 OR8I2Q8N0Y5 310 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 ZPBPQ9BS86 351 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 TMEM208Q9BTX3 173 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 GAL3ST2Q9H3Q3 398 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 HSPB8Q9UJY1 196 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 TNFSF11O14788 317 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 SYNGR3O43761 229 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 GNG7O60262 68 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 SSR4P51571 173 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 PSG5Q15238 335 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 SAMD13Q5VXD3 122 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 YRDCQ86U90 279 aaKnown RBP4.67□□□□□ -1.66
PTPRD-205ENST00000397611 OR10G3Q8NGC4 313 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 OR8A1Q8NGG7 326 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-205ENST00000397611 ALKBH3Q96Q83 286 aaPredicted RBP4.67□□□□□ -1.66
PTPRD-205ENST00000397611 MESP1Q9BRJ9 268 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 CACNA1DQ01668 2161 aa4.67□□□□□ -1.66
PTPRD-205ENST00000397611 ZNF716A6NP11 495 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 GDF9O60383 454 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 PRDX4Q13162 271 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 C1orf174Q8IYL3 243 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 OR52L2PQ8NGH6 319 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 BLNKQ8WV28 456 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 MUCL1Q96DR8 90 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 FOXB1Q99853 325 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 ATP23Q9Y6H3 246 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 PATE4P0C8F1 98 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 CA6P23280 308 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 SRIP30626 198 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 G6PCP35575 357 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 FGF12P61328 243 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 SLC25A34Q6PIV7 304 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 C18orf12Q96KH6 178 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 GPHA2Q96T91 129 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 LINC01565O15544 149 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 PPIHO43447 177 aaKnown RBP4.66□□□□□ -1.66
PTPRD-205ENST00000397611 FCGR3BO75015 233 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 HIST1H1EP10412 219 aaKnown RBP4.66□□□□□ -1.66
PTPRD-205ENST00000397611 BCL3P20749 454 aa4.66□□□□□ -1.66
PTPRD-205ENST00000397611 CBLN1P23435 193 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms