RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 TACC2O95359 2948 aa4.28□□□□□ -1.72
SSR1-202ENST00000397511 SSSCA1O60232 199 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 LILRA1O75019 489 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 CYB561P49447 251 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 MLF1P58340 268 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 HERV-K104P61576 105 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 MRPS34P82930 218 aaKnown RBP4.27□□□□□ -1.73
SSR1-202ENST00000397511 ZXDAP98168 799 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 RUNX1Q01196 453 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 MALLQ13021 153 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 IL11RAQ14626 422 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 TMEM187Q14656 261 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 CNN3Q15417 329 aaKnown RBP4.27□□□□□ -1.73
SSR1-202ENST00000397511 EXT1Q16394 746 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 SPATA45Q537H7 98 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 LHFPL4Q7Z7J7 247 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 CENPVQ7Z7K6 275 aaPredicted RBP4.27□□□□□ -1.73
SSR1-202ENST00000397511 OR5AU1Q8NGC0 362 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 OR5C1Q8NGR4 320 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 SIGLEC12Q96PQ1 595 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 OR2H1Q9GZK4 316 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 NAA60Q9H7X0 242 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 UBE2J1Q9Y385 318 aaPredicted RBP4.27□□□□□ -1.73
SSR1-202ENST00000397511 RNF115Q9Y4L5 304 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 ROS1P08922 2347 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 MED12LQ86YW9 2145 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 DUXBA0A1W2PPF3 345 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 IGSF23A1L1A6 192 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 NKX2-6A6NCS4 301 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 ZNF716A6NP11 495 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 MMP23AO75900 390 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 IGLV3-1P01715 115 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 CD33P20138 364 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 CRYGSP22914 178 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 GCH1P30793 250 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 OTX1P32242 354 aaPredicted RBP4.27□□□□□ -1.73
SSR1-202ENST00000397511 MAGEA5P43359 124 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 ZNF133P52736 654 aaPredicted RBP4.27□□□□□ -1.73
SSR1-202ENST00000397511 TAS2R30P59541 319 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 ARF6P62330 175 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 ARF1P84077 181 aaKnown RBP4.27□□□□□ -1.73
SSR1-202ENST00000397511 PRSS8Q16651 343 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 CXorf66Q5JRM2 361 aaPredicted RBP4.27□□□□□ -1.73
SSR1-202ENST00000397511 PRR27Q6MZM9 219 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 LIAT1Q6ZQX7 453 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 MRGPRGQ86SM5 289 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 KLHDC1Q8N7A1 406 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 OR51H1Q8NH63 302 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 TM2D1Q9BX74 207 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 ZNF665Q9H7R5 613 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 PIEZO2Q9H5I5 2752 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 LAMTOR5O43504 91 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 SYNGR1O43759 233 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 NUPR1O60356 82 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 KBTBD11O94819 623 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 CDS2O95674 445 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 PPYP01298 95 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 IFNA5P01569 189 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 NBEAP1P0C6P0 100 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 GNRHRP30968 328 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 APOBEC3AP31941 199 aaPredicted RBP4.27□□□□□ -1.73
SSR1-202ENST00000397511 CDKN1AP38936 164 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 MPLP40238 635 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 HINT1P49773 126 aaPredicted RBP4.27□□□□□ -1.73
SSR1-202ENST00000397511 DYNLT3P51808 116 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 B3GALT5-AS1P59052 145 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 RPL23P62829 140 aaKnown RBP4.27□□□□□ -1.73
SSR1-202ENST00000397511 BAXQ07812 192 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 MSMO1Q15800 293 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 ZNF818PQ6ZRF7 136 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 PPP1R32Q7Z5V6 425 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 ZNF695Q8IW36 515 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 GAPTQ8N292 157 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 LRTM2Q8N967 370 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 BCL2L2Q92843 193 aaPredicted RBP4.27□□□□□ -1.73
SSR1-202ENST00000397511 CLDN23Q96B33 292 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 WDYHV1Q96HA8 205 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 LOXL4Q96JB6 756 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 C18orf12Q96KH6 178 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 CDX2Q99626 313 aaPredicted RBP4.27□□□□□ -1.73
SSR1-202ENST00000397511 SAMD10Q9BYL1 202 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 WDR54Q9H977 334 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 ZNF286AQ9HBT8 521 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 CCL28Q9NRJ3 127 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 SLC35D1Q9NTN3 355 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 PXMP4Q9Y6I8 212 aa4.27□□□□□ -1.73
SSR1-202ENST00000397511 CHD3Q12873 2000 aaKnown RBP4.26□□□□□ -1.73
SSR1-202ENST00000397511 CACNA1HO95180 2353 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 KIAA1549Q9HCM3 1950 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 LOC102723996A0A087X1L8 192 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 IGKV1D-13A0A0B4J2D9 117 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 A0A0U1RQK1 487 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 A0A1B0GUS0 222 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 LRRC3CA6NJW4 275 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 HYPMO75409 117 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 IGKV1-13P0DP09 117 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 CTSSP25774 331 aa4.26□□□□□ -1.73
SSR1-202ENST00000397511 NKX2-1P43699 371 aaPredicted RBP4.26□□□□□ -1.73
SSR1-202ENST00000397511 CDC34P49427 236 aaPredicted RBP4.26□□□□□ -1.73
SSR1-202ENST00000397511 RPS16P62249 146 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms