RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 PRRC2AP48634 2157 aaKnown RBP22.34■■□□□ 1.17
CPNE1-203ENST00000397442 CR1P17927 2039 aa22.33■■□□□ 1.17
CPNE1-203ENST00000397442 MPTX1A8MV57 137 aa22.33■■□□□ 1.17
CPNE1-203ENST00000397442 B4DSR2 109 aa22.33■■□□□ 1.17
CPNE1-203ENST00000397442 RNASEK-C17orf49H0YIS7 233 aa22.33■■□□□ 1.17
CPNE1-203ENST00000397442 IGKV1-39P01597 117 aa22.33■■□□□ 1.17
CPNE1-203ENST00000397442 IGKV1D-39P04432 117 aa22.33■■□□□ 1.17
CPNE1-203ENST00000397442 HOXB5P09067 269 aa22.33■■□□□ 1.17
CPNE1-203ENST00000397442 CT45A6P0DMU7 189 aa22.33■■□□□ 1.17
CPNE1-203ENST00000397442 CT45A5P0DMU8 189 aa22.33■■□□□ 1.17
CPNE1-203ENST00000397442 CT45A7P0DMV0 189 aa22.33■■□□□ 1.17
CPNE1-203ENST00000397442 HOXB4P17483 251 aaPredicted RBP22.33■■□□□ 1.17
CPNE1-203ENST00000397442 OR2B11Q5JQS5 317 aa22.33■■□□□ 1.17
CPNE1-203ENST00000397442 SLC35G3Q8N808 338 aa22.33■■□□□ 1.17
CPNE1-203ENST00000397442 ZNF383Q8NA42 475 aa22.33■■□□□ 1.17
CPNE1-203ENST00000397442 PCGF1Q9BSM1 259 aa22.33■■□□□ 1.17
CPNE1-203ENST00000397442 ODF3BA8MYP8 253 aa22.33■■□□□ 1.16
CPNE1-203ENST00000397442 BUB1B-PAK6H3BSN5 160 aa22.33■■□□□ 1.16
CPNE1-203ENST00000397442 SERPINE2P07093 398 aa22.33■■□□□ 1.16
CPNE1-203ENST00000397442 FAM71F2Q6NXP2 309 aa22.33■■□□□ 1.16
CPNE1-203ENST00000397442 SPAG16Q8N0X2 631 aa22.33■■□□□ 1.16
CPNE1-203ENST00000397442 TCTEX1D1Q8N7M0 179 aa22.33■■□□□ 1.16
CPNE1-203ENST00000397442 MAPK1IP1LQ8NDC0 245 aa22.33■■□□□ 1.16
CPNE1-203ENST00000397442 IL22RA2Q969J5 263 aa22.33■■□□□ 1.16
CPNE1-203ENST00000397442 FAM212BQ9NTI7 297 aaPredicted RBP22.33■■□□□ 1.16
CPNE1-203ENST00000397442 LDLRAD2Q5SZI1 272 aa22.32■■□□□ 1.16
CPNE1-203ENST00000397442 ZNF695Q8IW36 515 aa22.32■■□□□ 1.16
CPNE1-203ENST00000397442 RBPMSQ93062 196 aaKnown RBP22.32■■□□□ 1.16
CPNE1-203ENST00000397442 CHIAQ9BZP6 476 aa22.32■■□□□ 1.16
CPNE1-203ENST00000397442 THBS3P49746 956 aa22.31■■□□□ 1.16
CPNE1-203ENST00000397442 GGNBP1Q5YKI7 109 aa22.31■■□□□ 1.16
CPNE1-203ENST00000397442 TCTE3Q8IZS6 198 aa22.31■■□□□ 1.16
CPNE1-203ENST00000397442 MRPL20Q9BYC9 149 aaKnown RBP22.31■■□□□ 1.16
CPNE1-203ENST00000397442 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.3■■□□□ 1.168e-8■■■■□ 20.3
CPNE1-203ENST00000397442 LY6LH3BQJ8 138 aa22.3■■□□□ 1.16
CPNE1-203ENST00000397442 ARG1P05089 322 aa22.3■■□□□ 1.16
CPNE1-203ENST00000397442 GIPP09681 153 aaPredicted RBP22.3■■□□□ 1.16
CPNE1-203ENST00000397442 LPAR6P43657 344 aa22.3■■□□□ 1.16
CPNE1-203ENST00000397442 REG1BP48304 166 aa22.3■■□□□ 1.16
CPNE1-203ENST00000397442 SRSF4Q08170 494 aaKnown RBP22.3■■□□□ 1.16
CPNE1-203ENST00000397442 WFDC11Q8NEX6 87 aa22.3■■□□□ 1.16
CPNE1-203ENST00000397442 ADTRPQ96IZ2 230 aa22.3■■□□□ 1.16
CPNE1-203ENST00000397442 OR10C1Q96KK4 312 aa22.3■■□□□ 1.16
CPNE1-203ENST00000397442 FOXC2Q99958 501 aa22.3■■□□□ 1.16
CPNE1-203ENST00000397442 IL3RAP26951 378 aa22.3■■□□□ 1.16
CPNE1-203ENST00000397442 PDZD9Q8IXQ8 264 aa22.3■■□□□ 1.16
CPNE1-203ENST00000397442 FAM25EA8MYX2 175 aa22.29■■□□□ 1.16
CPNE1-203ENST00000397442 FCGR3BO75015 233 aa22.29■■□□□ 1.16
CPNE1-203ENST00000397442 ZNF816Q0VGE8 651 aaPredicted RBP22.29■■□□□ 1.16
CPNE1-203ENST00000397442 LINC01356Q8N9X3 169 aa22.29■■□□□ 1.16
CPNE1-203ENST00000397442 SEC22AQ96IW7 307 aa22.29■■□□□ 1.16
CPNE1-203ENST00000397442 PRELID3BQ9Y3B1 194 aa22.29■■□□□ 1.16
CPNE1-203ENST00000397442 AMMECR1Q9Y4X0 333 aaPredicted RBP22.29■■□□□ 1.16
CPNE1-203ENST00000397442 CCDC168Q8NDH2 2452 aa22.28■■□□□ 1.16
CPNE1-203ENST00000397442 C13orf42A0A1B0GVH6 325 aa22.28■■□□□ 1.16
CPNE1-203ENST00000397442 DUXBA0A1W2PPF3 345 aa22.28■■□□□ 1.16
CPNE1-203ENST00000397442 RBFOX2O43251 390 aaKnown RBP eCLIP22.28■■□□□ 1.167e-8■■■■□ 26.3
CPNE1-203ENST00000397442 RPA2P15927 270 aa22.28■■□□□ 1.16
CPNE1-203ENST00000397442 GSG1LQ6UXU4 331 aa22.28■■□□□ 1.16
CPNE1-203ENST00000397442 CD300LFQ8TDQ1 290 aa22.28■■□□□ 1.16
CPNE1-203ENST00000397442 NABP2Q9BQ15 211 aa22.28■■□□□ 1.16
CPNE1-203ENST00000397442 TMED3Q9Y3Q3 217 aa22.28■■□□□ 1.16
CPNE1-203ENST00000397442 C5orf51A6NDU8 294 aa22.27■■□□□ 1.16
CPNE1-203ENST00000397442 SMLR1H3BR10 107 aa22.27■■□□□ 1.16
CPNE1-203ENST00000397442 S1PR2O95136 353 aa22.27■■□□□ 1.16
CPNE1-203ENST00000397442 NMSQ5H8A3 153 aa22.27■■□□□ 1.16
CPNE1-203ENST00000397442 RBMXL1Q96E39 390 aaKnown RBP22.27■■□□□ 1.16
CPNE1-203ENST00000397442 HIF1ANQ9NWT6 349 aa22.27■■□□□ 1.16
CPNE1-203ENST00000397442 TRAV20A0A0B4J274 112 aa22.26■■□□□ 1.15
CPNE1-203ENST00000397442 BOLA2-SMG1P6H3BVE0 249 aa22.26■■□□□ 1.15
CPNE1-203ENST00000397442 IFNA21P01568 189 aa22.26■■□□□ 1.15
CPNE1-203ENST00000397442 VDAC1P21796 283 aa22.26■■□□□ 1.15
CPNE1-203ENST00000397442 RAP2BP61225 183 aa22.26■■□□□ 1.15
CPNE1-203ENST00000397442 TGIF2LXQ8IUE1 241 aa22.26■■□□□ 1.15
CPNE1-203ENST00000397442 OR5AN1Q8NGI8 311 aa22.26■■□□□ 1.15
CPNE1-203ENST00000397442 LHX4Q969G2 390 aa22.26■■□□□ 1.15
CPNE1-203ENST00000397442 PPP1R14BQ96C90 147 aa22.26■■□□□ 1.15
CPNE1-203ENST00000397442 A0A0G2JRQ6 117 aa22.26■■□□□ 1.15
CPNE1-203ENST00000397442 A0A1W2PRD5 423 aa22.26■■□□□ 1.15
CPNE1-203ENST00000397442 A0A1W2PRF3 423 aa22.26■■□□□ 1.15
CPNE1-203ENST00000397442 A0A1W2PRM7 423 aa22.26■■□□□ 1.15
CPNE1-203ENST00000397442 G3V3Q6 166 aa22.26■■□□□ 1.15
CPNE1-203ENST00000397442 IGKV1-5P01602 117 aa22.26■■□□□ 1.15
CPNE1-203ENST00000397442 HTR1DP28221 377 aa22.26■■□□□ 1.15
CPNE1-203ENST00000397442 KIR2DS2P43631 304 aa22.26■■□□□ 1.15
CPNE1-203ENST00000397442 IGHV4-31P0DP07 118 aa22.25■■□□□ 1.15
CPNE1-203ENST00000397442 UBE2E1P51965 193 aa22.25■■□□□ 1.15
CPNE1-203ENST00000397442 TMEM249Q2WGJ8 235 aa22.25■■□□□ 1.15
CPNE1-203ENST00000397442 Q5BKY6 102 aa22.25■■□□□ 1.15
CPNE1-203ENST00000397442 LHFPL4Q7Z7J7 247 aa22.25■■□□□ 1.15
CPNE1-203ENST00000397442 ASB13Q8WXK3 278 aa22.25■■□□□ 1.15
CPNE1-203ENST00000397442 C2orf50Q96LR7 162 aa22.25■■□□□ 1.15
CPNE1-203ENST00000397442 PDCD10Q9BUL8 212 aa22.25■■□□□ 1.15
CPNE1-203ENST00000397442 PLEKHA2Q9HB19 425 aa22.25■■□□□ 1.15
CPNE1-203ENST00000397442 DPM3Q9P2X0 92 aa22.25■■□□□ 1.15
CPNE1-203ENST00000397442 H0YJW9 148 aa22.24■■□□□ 1.15
CPNE1-203ENST00000397442 IL15RAQ13261 267 aa22.24■■□□□ 1.15
CPNE1-203ENST00000397442 OR2T35Q8NGX2 323 aa22.24■■□□□ 1.15
CPNE1-203ENST00000397442 ITPR3Q14573 2671 aa22.24■■□□□ 1.15
CPNE1-203ENST00000397442 PIGBOS1A0A0B4J2F0 54 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms