RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 CLPPQ16740 277 aaPredicted RBP10.69□□□□□ -0.7
SMU1-201ENST00000397149 ZNF826PQ6ZT77 177 aa10.69□□□□□ -0.7
SMU1-201ENST00000397149 NFAM1Q8NET5 270 aaPredicted RBP10.69□□□□□ -0.7
SMU1-201ENST00000397149 KNL1Q8NG31 2342 aa10.69□□□□□ -0.7
SMU1-201ENST00000397149 VIRMAQ69YN4 1812 aaKnown RBP10.69□□□□□ -0.7
SMU1-201ENST00000397149 BGLAPP02818 100 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 ITLN1Q8WWA0 313 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 ZNF625Q96I27 306 aaPredicted RBP10.68□□□□□ -0.7
SMU1-201ENST00000397149 OR5AC2Q9NZP5 309 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 NEU3Q9UQ49 428 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 TGIF2-C20orf24A0A0A6YYL0 155 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 NSUN5P1Q3KNT7 163 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 DLL1O00548 723 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 SYNGR3O43761 229 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 ARL14EPLP0DKL9 152 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 RPS11P62280 158 aaKnown RBP eCLIP10.68□□□□□ -0.7
SMU1-201ENST00000397149 RPL8P62917 257 aaKnown RBP10.68□□□□□ -0.7
SMU1-201ENST00000397149 ALKAL1Q6UXT8 129 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 MRAPQ8TCY5 172 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 SHROOM3Q8TF72 1996 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 PLPP2O43688 288 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 ANAPC13Q9BS18 74 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 YAE1D1Q9NRH1 226 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 IGHV1OR21-1A0A087WYE8 117 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 LEUTXA8MZ59 168 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 J3QT63 122 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 HPRT1P00492 218 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 MOSP00540 346 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 XRN1Q8IZH2 1706 aaKnown RBP10.68□□□□□ -0.7
SMU1-201ENST00000397149 PIK3C2AO00443 1686 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 NPIPB4C9JG80 1138 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 CCL3P10147 92 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 PGFP49763 221 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 RIPPLY3P57055 190 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 CTAG1AP78358 180 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 C1orf185Q5T7R7 199 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 DCAF12L2Q5VW00 463 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 FAM71F2Q6NXP2 309 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 PCSK4Q6UW60 755 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 WDR82Q6UXN9 313 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 C1orf122Q6ZSJ8 110 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 C10orf111Q8N326 155 aa10.68□□□□□ -0.7
SMU1-201ENST00000397149 TRAV2A0A0B4J234 112 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 TCRBV5S2A0A599 114 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 RTN4RL2Q86UN3 420 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 OR9G4Q8NGQ1 327 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 QTRT1Q9BXR0 403 aaKnown RBP10.67□□□□□ -0.7
SMU1-201ENST00000397149 SEMA5BQ9P283 1151 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 PPIAL4CA0A0B4J2A2 164 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 PPIAL4GP0DN37 164 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 PRB4P10163 310 aaPredicted RBP10.67□□□□□ -0.7
SMU1-201ENST00000397149 RPS20P60866 119 aaKnown RBP10.67□□□□□ -0.7
SMU1-201ENST00000397149 WNT2BQ93097 391 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 LAMTOR3Q9UHA4 124 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 LTBP3Q9NS15 1303 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 DMRTA1Q5VZB9 504 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 JMJD8Q96S16 334 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 ABHD1Q96SE0 405 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 CHST5Q9GZS9 411 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 TMEM50AO95807 157 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 CT62P0C5K7 136 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 HOXB3P14651 431 aaPredicted RBP10.67□□□□□ -0.7
SMU1-201ENST00000397149 LOC105371242A0A075B767 164 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 RPL36A-HNRNPH2H7BZ11 118 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 CXCL3P19876 107 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 NKG7Q16617 165 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 STHQ8IWL8 128 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 RASL10BQ96S79 203 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 OR51M1Q9H341 326 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 ZNF430Q9H8G1 570 aaPredicted RBP10.67□□□□□ -0.7
SMU1-201ENST00000397149 CALYQ9NYX4 217 aa10.67□□□□□ -0.7
SMU1-201ENST00000397149 HBDP02042 147 aa10.66□□□□□ -0.7
SMU1-201ENST00000397149 CRYBB2P43320 205 aa10.66□□□□□ -0.7
SMU1-201ENST00000397149 LINC00158P58513 81 aa10.66□□□□□ -0.7
SMU1-201ENST00000397149 RPP25Q9BUL9 199 aaKnown RBP10.66□□□□□ -0.7
SMU1-201ENST00000397149 MEGF9Q9H1U4 602 aa10.66□□□□□ -0.7
SMU1-201ENST00000397149 FGF5P12034 268 aa10.66□□□□□ -0.7
SMU1-201ENST00000397149 SPEF2Q9C093 1822 aa10.66□□□□□ -0.7
SMU1-201ENST00000397149 SHISA5Q8N114 240 aa10.66□□□□□ -0.7
SMU1-201ENST00000397149 IGLV3-10A0A075B6K4 115 aa10.66□□□□□ -0.7
SMU1-201ENST00000397149 H7C1H1 209 aa10.66□□□□□ -0.7
SMU1-201ENST00000397149 CTSSP25774 331 aa10.66□□□□□ -0.7
SMU1-201ENST00000397149 PDLIM4P50479 330 aa10.66□□□□□ -0.7
SMU1-201ENST00000397149 MS4A3Q96HJ5 214 aa10.66□□□□□ -0.7
SMU1-201ENST00000397149 PLA2G2FQ9BZM2 168 aa10.66□□□□□ -0.7
SMU1-201ENST00000397149 SERGEFQ9UGK8 458 aa10.66□□□□□ -0.7
SMU1-201ENST00000397149 MRM2Q9UI43 246 aaKnown RBP10.66□□□□□ -0.7
SMU1-201ENST00000397149 MRPS18BQ9Y676 258 aaKnown RBP10.66□□□□□ -0.7
SMU1-201ENST00000397149 CLPSL1A2RUU4 121 aa10.66□□□□□ -0.7
SMU1-201ENST00000397149 GGTLC3B5MD39 225 aa10.66□□□□□ -0.7
SMU1-201ENST00000397149 BCL2P10415 239 aa10.66□□□□□ -0.7
SMU1-201ENST00000397149 ASIPP42127 132 aa10.66□□□□□ -0.7
SMU1-201ENST00000397149 FHL5Q5TD97 284 aa10.66□□□□□ -0.7
SMU1-201ENST00000397149 MYEOVQ96EZ4 313 aa10.66□□□□□ -0.7
SMU1-201ENST00000397149 IL20Q9NYY1 176 aa10.66□□□□□ -0.7
SMU1-201ENST00000397149 TRAV8-4A0A0B4J246 113 aa10.65□□□□□ -0.7
SMU1-201ENST00000397149 TRGV4A0A0C4DH28 118 aa10.65□□□□□ -0.7
SMU1-201ENST00000397149 C7orf66A4D0T2 115 aa10.65□□□□□ -0.7
SMU1-201ENST00000397149 ICAM4Q14773 271 aa10.65□□□□□ -0.7
SMU1-201ENST00000397149 JPT2Q9H910 190 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms