RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 PRRX1P54821 245 aa10.77□□□□□ -0.68
SEC13-209ENST00000397117 SUPT4H1P63272 117 aaKnown RBP10.77□□□□□ -0.68
SEC13-209ENST00000397117 LYG1Q8N1E2 194 aa10.77□□□□□ -0.68
SEC13-209ENST00000397117 C12orf45Q8N5I9 185 aaPredicted RBP10.77□□□□□ -0.68
SEC13-209ENST00000397117 C8orf31Q8N9H6 132 aa10.77□□□□□ -0.68
SEC13-209ENST00000397117 OR13D1Q8NGV5 346 aa10.77□□□□□ -0.68
SEC13-209ENST00000397117 OR9G1Q8NH87 305 aa10.77□□□□□ -0.68
SEC13-209ENST00000397117 COQ8AQ8NI60 647 aa10.77□□□□□ -0.68
SEC13-209ENST00000397117 MMP26Q9NRE1 261 aa10.77□□□□□ -0.68
SEC13-209ENST00000397117 SDHAF2Q9NX18 166 aa10.77□□□□□ -0.68
SEC13-209ENST00000397117 PIPOXQ9P0Z9 390 aa10.77□□□□□ -0.68
SEC13-209ENST00000397117 POLR3KQ9Y2Y1 108 aaPredicted RBP10.77□□□□□ -0.68
SEC13-209ENST00000397117 C3orf85A0A1B0GTC6 90 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 J3QR06 171 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 PAX2Q02962 417 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 AWAT1Q58HT5 328 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 PRR31Q5SQ13 230 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 KCTD9Q7L273 389 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 Q8N7P7 452 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.76□□□□□ -0.69
SEC13-209ENST00000397117 OR51H1Q8NH63 302 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 MITD1Q8WV92 249 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 JMJD8Q96S16 334 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 GPHA2Q96T91 129 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 S1PR3Q99500 378 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 CLEC7AQ9BXN2 247 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 HEXA-AS1Q9H8Q6 139 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 SIRT7Q9NRC8 400 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 TRRAPQ9Y4A5 3859 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 SAA2-SAA4A0A096LPE2 208 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 IGHV2-26A0A0B4J1V2 119 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 B3GALNT1O75752 331 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 OR5AC1P0C628 307 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 SAA2P0DJI9 122 aaPredicted RBP10.76□□□□□ -0.69
SEC13-209ENST00000397117 PRTN3P24158 256 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 COX7A1P24310 79 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 CATR1Q13166 79 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 FCN2Q15485 313 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 SP6Q3SY56 376 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 LINC00311Q8N616 119 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 TEX29Q8N6K0 151 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 TNFRSF14Q92956 283 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 GALNT14Q96FL9 552 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 HSD17B10Q99714 261 aaKnown RBP10.76□□□□□ -0.69
SEC13-209ENST00000397117 LIN7CQ9NUP9 197 aaKnown RBP10.76□□□□□ -0.69
SEC13-209ENST00000397117 GAB2Q9UQC2 676 aa10.76□□□□□ -0.69
SEC13-209ENST00000397117 M0R1X1 148 aa10.75□□□□□ -0.69
SEC13-209ENST00000397117 TOX4O94842 621 aa10.75□□□□□ -0.69
SEC13-209ENST00000397117 SULT1A3P0DMM9 295 aa10.75□□□□□ -0.69
SEC13-209ENST00000397117 SULT1A4P0DMN0 295 aa10.75□□□□□ -0.69
SEC13-209ENST00000397117 F2RP25116 425 aa10.75□□□□□ -0.69
SEC13-209ENST00000397117 IL3RAP26951 378 aa10.75□□□□□ -0.69
SEC13-209ENST00000397117 SRPXP78539 464 aa10.75□□□□□ -0.69
SEC13-209ENST00000397117 RPL39P5Q59GN2 51 aa10.75□□□□□ -0.69
SEC13-209ENST00000397117 LIN54Q6MZP7 749 aa10.75□□□□□ -0.69
SEC13-209ENST00000397117 ZNF66Q6ZN08 573 aa10.75□□□□□ -0.69
SEC13-209ENST00000397117 VMO1Q7Z5L0 202 aa10.75□□□□□ -0.69
SEC13-209ENST00000397117 PNKDQ8N490 385 aa10.75□□□□□ -0.69
SEC13-209ENST00000397117 OR11H7Q8NGC8 314 aa10.75□□□□□ -0.69
SEC13-209ENST00000397117 ZNF747Q9BV97 191 aa10.75□□□□□ -0.69
SEC13-209ENST00000397117 ESM1Q9NQ30 184 aa10.75□□□□□ -0.69
SEC13-209ENST00000397117 A0A0B4J2A0 478 aa10.74□□□□□ -0.69
SEC13-209ENST00000397117 H0Y980 276 aa10.74□□□□□ -0.69
SEC13-209ENST00000397117 DLX1P56177 255 aa10.74□□□□□ -0.69
SEC13-209ENST00000397117 PRB3Q04118 309 aaPredicted RBP10.74□□□□□ -0.69
SEC13-209ENST00000397117 TMEM187Q14656 261 aa10.74□□□□□ -0.69
SEC13-209ENST00000397117 ANKRD55Q3KP44 614 aa10.74□□□□□ -0.69
SEC13-209ENST00000397117 TCTE3Q8IZS6 198 aa10.74□□□□□ -0.69
SEC13-209ENST00000397117 BEND2Q8NDZ0 799 aa10.74□□□□□ -0.69
SEC13-209ENST00000397117 ZNF596Q8TC21 504 aa10.74□□□□□ -0.69
SEC13-209ENST00000397117 TCTEX1D2Q8WW35 142 aa10.74□□□□□ -0.69
SEC13-209ENST00000397117 C5orf30Q96GV9 206 aa10.74□□□□□ -0.69
SEC13-209ENST00000397117 TP53RKQ96S44 253 aa10.74□□□□□ -0.69
SEC13-209ENST00000397117 PCGF1Q9BSM1 259 aa10.74□□□□□ -0.69
SEC13-209ENST00000397117 TMEM222Q9H0R3 208 aa10.74□□□□□ -0.69
SEC13-209ENST00000397117 UNKLQ9H9P5 680 aaKnown RBP10.74□□□□□ -0.69
SEC13-209ENST00000397117 RANGRFQ9HD47 186 aaPredicted RBP10.74□□□□□ -0.69
SEC13-209ENST00000397117 PRR13Q9NZ81 148 aa10.74□□□□□ -0.69
SEC13-209ENST00000397117 ZNRD1Q9P1U0 126 aa10.74□□□□□ -0.69
SEC13-209ENST00000397117 MGAT4CQ9UBM8 478 aa10.74□□□□□ -0.69
SEC13-209ENST00000397117 SHPKQ9UHJ6 478 aa10.74□□□□□ -0.69
SEC13-209ENST00000397117 AMMECR1Q9Y4X0 333 aaPredicted RBP10.74□□□□□ -0.69
SEC13-209ENST00000397117 INSIG2Q9Y5U4 225 aa10.74□□□□□ -0.69
SEC13-209ENST00000397117 GOSR2O14653 212 aa10.73□□□□□ -0.69
SEC13-209ENST00000397117 SERPINE2P07093 398 aa10.73□□□□□ -0.69
SEC13-209ENST00000397117 CD83Q01151 205 aa10.73□□□□□ -0.69
SEC13-209ENST00000397117 NCR3LG1Q68D85 454 aa10.73□□□□□ -0.69
SEC13-209ENST00000397117 LIAT1Q6ZQX7 453 aa10.73□□□□□ -0.69
SEC13-209ENST00000397117 ODF3L1Q8IXM7 274 aa10.73□□□□□ -0.69
SEC13-209ENST00000397117 LGI3Q8N145 548 aa10.73□□□□□ -0.69
SEC13-209ENST00000397117 GLYATL2Q8WU03 294 aa10.73□□□□□ -0.69
SEC13-209ENST00000397117 FYTTD1Q96QD9 318 aaKnown RBP10.73□□□□□ -0.69
SEC13-209ENST00000397117 SIRPDQ9H106 197 aa10.73□□□□□ -0.69
SEC13-209ENST00000397117 PIGBOS1A0A0B4J2F0 54 aa10.73□□□□□ -0.69
SEC13-209ENST00000397117 RGS13O14921 159 aa10.73□□□□□ -0.69
SEC13-209ENST00000397117 ARG1P05089 322 aa10.73□□□□□ -0.69
SEC13-209ENST00000397117 CXCL3P19876 107 aa10.73□□□□□ -0.69
SEC13-209ENST00000397117 DUTP33316 252 aaKnown RBP10.73□□□□□ -0.69
SEC13-209ENST00000397117 EIF4EBP1Q13541 118 aaPredicted RBP10.73□□□□□ -0.69
SEC13-209ENST00000397117 HLA-DRB5Q30154 266 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms