RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 PTPRZ1P23471 2315 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-208ENST00000397030 FBLL1A6NHQ2 334 aaKnown RBP14.96□□□□□ -0.01
MCF2L-208ENST00000397030 ACAA1P09110 424 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-208ENST00000397030 LOC107984156A0A0G2JMH3 177 aa14.96□□□□□ -0.01
MCF2L-208ENST00000397030 ARL17AQ8IVW1 177 aa14.96□□□□□ -0.01
MCF2L-208ENST00000397030 C12orf57Q99622 126 aa14.96□□□□□ -0.01
MCF2L-208ENST00000397030 ASCC3Q8N3C0 2202 aaKnown RBP14.96□□□□□ -0.01
MCF2L-208ENST00000397030 CASP8AP2Q9UKL3 1982 aa14.96□□□□□ -0.01
MCF2L-208ENST00000397030 TRAV30A0A087WSZ9 112 aa14.96□□□□□ -0.01
MCF2L-208ENST00000397030 COMPP49747 757 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-208ENST00000397030 NEU3Q9UQ49 428 aa14.96□□□□□ -0.01
MCF2L-208ENST00000397030 IGKV3D-20A0A0C4DH25 116 aa14.96□□□□□ -0.02
MCF2L-208ENST00000397030 RECKO95980 971 aa14.96□□□□□ -0.02
MCF2L-208ENST00000397030 HSPB1P04792 205 aaKnown RBP14.96□□□□□ -0.02
MCF2L-208ENST00000397030 MBNL2Q5VZF2 373 aaKnown RBP14.96□□□□□ -0.02
MCF2L-208ENST00000397030 QTRT1Q9BXR0 403 aaKnown RBP14.96□□□□□ -0.02
MCF2L-208ENST00000397030 BEX4Q9NWD9 120 aaPredicted RBP14.96□□□□□ -0.02
MCF2L-208ENST00000397030 PGPEP1Q9NXJ5 209 aa14.96□□□□□ -0.02
MCF2L-208ENST00000397030 PEMTQ9UBM1 199 aa14.96□□□□□ -0.02
MCF2L-208ENST00000397030 IL4P05112 153 aa14.95□□□□□ -0.02
MCF2L-208ENST00000397030 KLK13Q9UKR3 277 aa14.95□□□□□ -0.02
MCF2L-208ENST00000397030 RAB33BQ9H082 229 aa14.95□□□□□ -0.02
MCF2L-208ENST00000397030 LYRM2Q9NU23 88 aaPredicted RBP14.95□□□□□ -0.02
MCF2L-208ENST00000397030 TSPAN2O60636 221 aa14.95□□□□□ -0.02
MCF2L-208ENST00000397030 C8orf46Q8TAG6 207 aa14.95□□□□□ -0.02
MCF2L-208ENST00000397030 FAM57AQ8TBR7 257 aa14.95□□□□□ -0.02
MCF2L-208ENST00000397030 TNFRSF18Q9Y5U5 241 aa14.95□□□□□ -0.02
MCF2L-208ENST00000397030 NEU4Q8WWR8 484 aaPredicted RBP14.95□□□□□ -0.02
MCF2L-208ENST00000397030 PHYHIPLQ96FC7 376 aa14.95□□□□□ -0.02
MCF2L-208ENST00000397030 ZFP30Q9Y2G7 519 aa14.95□□□□□ -0.02
MCF2L-208ENST00000397030 HINT1P49773 126 aaPredicted RBP14.95□□□□□ -0.02
MCF2L-208ENST00000397030 CIRBPQ14011 172 aaKnown RBP14.95□□□□□ -0.02
MCF2L-208ENST00000397030 MIC13Q5XKP0 118 aa14.95□□□□□ -0.02
MCF2L-208ENST00000397030 GLMPQ8WWB7 406 aa14.95□□□□□ -0.02
MCF2L-208ENST00000397030 ISOC2Q96AB3 205 aa14.95□□□□□ -0.02
MCF2L-208ENST00000397030 PPP1R27Q86WC6 154 aa14.95□□□□□ -0.02
MCF2L-208ENST00000397030 IL19Q9UHD0 177 aa14.95□□□□□ -0.02
MCF2L-208ENST00000397030 OGG1O15527 345 aa14.94□□□□□ -0.02
MCF2L-208ENST00000397030 UQCC3Q6UW78 93 aa14.94□□□□□ -0.02
MCF2L-208ENST00000397030 RFLNBQ8N5W9 214 aa14.94□□□□□ -0.02
MCF2L-208ENST00000397030 EIF3GO75821 320 aaKnown RBP eCLIP14.94□□□□□ -0.02
MCF2L-208ENST00000397030 LMX1BO60663 402 aa14.94□□□□□ -0.02
MCF2L-208ENST00000397030 PGA5P0DJD9 388 aa14.94□□□□□ -0.02
MCF2L-208ENST00000397030 MFAP2P55001 183 aa14.94□□□□□ -0.02
MCF2L-208ENST00000397030 FBXL15Q9H469 300 aa14.94□□□□□ -0.02
MCF2L-208ENST00000397030 SNRPEP62304 92 aaKnown RBP14.94□□□□□ -0.02
MCF2L-208ENST00000397030 CD300LDQ6UXZ3 194 aa14.94□□□□□ -0.02
MCF2L-208ENST00000397030 HOXC8P31273 242 aa14.93□□□□□ -0.02
MCF2L-208ENST00000397030 GPR183P32249 361 aa14.93□□□□□ -0.02
MCF2L-208ENST00000397030 DNASE2BQ8WZ79 361 aa14.93□□□□□ -0.02
MCF2L-208ENST00000397030 GNLYP22749 145 aa14.93□□□□□ -0.02
MCF2L-208ENST00000397030 XAF1Q6GPH4 301 aa14.93□□□□□ -0.02
MCF2L-208ENST00000397030 SPACA3Q8IXA5 215 aa14.93□□□□□ -0.02
MCF2L-208ENST00000397030 SRSF12Q8WXF0 261 aaKnown RBP14.93□□□□□ -0.02
MCF2L-208ENST00000397030 FBXL7Q9UJT9 491 aa14.93□□□□□ -0.02
MCF2L-208ENST00000397030 RFPL3SP0C7P2 107 aa14.93□□□□□ -0.02
MCF2L-208ENST00000397030 SCAND1P57086 179 aa14.93□□□□□ -0.02
MCF2L-208ENST00000397030 WFDC12Q8WWY7 111 aa14.93□□□□□ -0.02
MCF2L-208ENST00000397030 SCARF2Q96GP6 870 aaPredicted RBP14.93□□□□□ -0.02
MCF2L-208ENST00000397030 ABHD1Q96SE0 405 aa14.93□□□□□ -0.02
MCF2L-208ENST00000397030 TRIP11Q15643 1979 aa14.93□□□□□ -0.02
MCF2L-208ENST00000397030 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.93□□□□□ -0.02
MCF2L-208ENST00000397030 PLXNB2O15031 1838 aa14.93□□□□□ -0.02
MCF2L-208ENST00000397030 CA2P00918 260 aa14.92□□□□□ -0.02
MCF2L-208ENST00000397030 RUNX1Q01196 453 aa14.92□□□□□ -0.02
MCF2L-208ENST00000397030 SRSF7Q16629 238 aaKnown RBP eCLIP14.92□□□□□ -0.02
MCF2L-208ENST00000397030 PTP4A3O75365 173 aa14.92□□□□□ -0.02
MCF2L-208ENST00000397030 ALX3O95076 343 aa14.92□□□□□ -0.02
MCF2L-208ENST00000397030 CD1AP06126 327 aa14.92□□□□□ -0.02
MCF2L-208ENST00000397030 ZP4Q12836 540 aa14.92□□□□□ -0.02
MCF2L-208ENST00000397030 ABLIM2Q6H8Q1 611 aa14.92□□□□□ -0.02
MCF2L-208ENST00000397030 CTXND1A0A1B0GTU2 59 aa14.92□□□□□ -0.02
MCF2L-208ENST00000397030 FGF9P31371 208 aaPredicted RBP14.92□□□□□ -0.02
MCF2L-208ENST00000397030 SURF2Q15527 256 aaPredicted RBP14.92□□□□□ -0.02
MCF2L-208ENST00000397030 C11orf91Q3C1V1 193 aa14.92□□□□□ -0.02
MCF2L-208ENST00000397030 ZNF343Q6P1L6 599 aa14.92□□□□□ -0.02
MCF2L-208ENST00000397030 DNM1P46Q6ZS02 220 aa14.92□□□□□ -0.02
MCF2L-208ENST00000397030 FOXA2Q9Y261 457 aaPredicted RBP14.92□□□□□ -0.02
MCF2L-208ENST00000397030 COL22A1Q8NFW1 1626 aaPredicted RBP14.92□□□□□ -0.02
MCF2L-208ENST00000397030 A0A1W2PP11 408 aa14.92□□□□□ -0.02
MCF2L-208ENST00000397030 TMEM177Q53S58 311 aa14.92□□□□□ -0.02
MCF2L-208ENST00000397030 RPL39P5Q59GN2 51 aa14.92□□□□□ -0.02
MCF2L-208ENST00000397030 CFAP161Q6P656 301 aa14.92□□□□□ -0.02
MCF2L-208ENST00000397030 RCC1P18754 421 aaPredicted RBP14.92□□□□□ -0.02
MCF2L-208ENST00000397030 C10orf111Q8N326 155 aa14.92□□□□□ -0.02
MCF2L-208ENST00000397030 LSM10Q969L4 123 aaKnown RBP14.92□□□□□ -0.02
MCF2L-208ENST00000397030 DLL3Q9NYJ7 618 aa14.92□□□□□ -0.02
MCF2L-208ENST00000397030 STRCQ7RTU9 1775 aa14.92□□□□□ -0.02
MCF2L-208ENST00000397030 M0R381 172 aa14.91□□□□□ -0.02
MCF2L-208ENST00000397030 RBFOX2O43251 390 aaKnown RBP eCLIP14.91□□□□□ -0.024e-6■■□□□ 13.5
MCF2L-208ENST00000397030 AWAT1Q58HT5 328 aa14.91□□□□□ -0.02
MCF2L-208ENST00000397030 NCMAPQ5T1S8 102 aa14.91□□□□□ -0.02
MCF2L-208ENST00000397030 CHRNA10Q9GZZ6 450 aa14.91□□□□□ -0.02
MCF2L-208ENST00000397030 MAP1LC3AQ9H492 121 aa14.91□□□□□ -0.02
MCF2L-208ENST00000397030 COX6CP09669 75 aa14.91□□□□□ -0.02
MCF2L-208ENST00000397030 CD33P20138 364 aa14.91□□□□□ -0.02
MCF2L-208ENST00000397030 TMEM186Q96B77 213 aa14.91□□□□□ -0.02
MCF2L-208ENST00000397030 ABCA3Q99758 1704 aa14.91□□□□□ -0.02
MCF2L-208ENST00000397030 IBA57Q5T440 356 aaKnown RBP14.91□□□□□ -0.02
MCF2L-208ENST00000397030 C7orf71A4D174 169 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms