RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 VWC2LB2RUY7 222 aa12.27□□□□□ -0.45
TM9SF1-202ENST00000396854 MGST3O14880 152 aa12.27□□□□□ -0.45
TM9SF1-202ENST00000396854 CDS2O95674 445 aa12.27□□□□□ -0.45
TM9SF1-202ENST00000396854 CRYBA1P05813 215 aa12.27□□□□□ -0.45
TM9SF1-202ENST00000396854 SELLP14151 372 aa12.27□□□□□ -0.45
TM9SF1-202ENST00000396854 FOLR2P14207 255 aa12.27□□□□□ -0.45
TM9SF1-202ENST00000396854 ZNF880Q6PDB4 577 aa12.27□□□□□ -0.45
TM9SF1-202ENST00000396854 OR5D13Q8NGL4 314 aa12.27□□□□□ -0.45
TM9SF1-202ENST00000396854 PLPPR1Q8TBJ4 325 aa12.27□□□□□ -0.45
TM9SF1-202ENST00000396854 MRPL30Q8TCC3 161 aaKnown RBP12.27□□□□□ -0.45
TM9SF1-202ENST00000396854 AKR1E2Q96JD6 320 aa12.27□□□□□ -0.45
TM9SF1-202ENST00000396854 PIMREGQ9BSJ6 248 aa12.27□□□□□ -0.45
TM9SF1-202ENST00000396854 BPESC1Q9GZL8 116 aa12.27□□□□□ -0.45
TM9SF1-202ENST00000396854 TMEM222Q9H0R3 208 aa12.27□□□□□ -0.45
TM9SF1-202ENST00000396854 SMCO4Q9NRQ5 59 aa12.27□□□□□ -0.45
TM9SF1-202ENST00000396854 MIOXQ9UGB7 285 aa12.27□□□□□ -0.45
TM9SF1-202ENST00000396854 DOCK11Q5JSL3 2073 aa12.27□□□□□ -0.45
TM9SF1-202ENST00000396854 TRDCB7Z8K6 153 aa12.26□□□□□ -0.45
TM9SF1-202ENST00000396854 RND3P61587 244 aa12.26□□□□□ -0.45
TM9SF1-202ENST00000396854 IGSF11Q5DX21 431 aa12.26□□□□□ -0.45
TM9SF1-202ENST00000396854 ZNF497Q6ZNH5 498 aa12.26□□□□□ -0.45
TM9SF1-202ENST00000396854 C15orf54Q8N8G6 183 aa12.26□□□□□ -0.45
TM9SF1-202ENST00000396854 SECTM1Q8WVN6 248 aa12.26□□□□□ -0.45
TM9SF1-202ENST00000396854 FCN3O75636 299 aa12.26□□□□□ -0.45
TM9SF1-202ENST00000396854 CAMLGP49069 296 aa12.26□□□□□ -0.45
TM9SF1-202ENST00000396854 GNMTQ14749 295 aa12.26□□□□□ -0.45
TM9SF1-202ENST00000396854 GUK1Q16774 197 aa12.26□□□□□ -0.45
TM9SF1-202ENST00000396854 SLC35E4Q6ICL7 350 aa12.26□□□□□ -0.45
TM9SF1-202ENST00000396854 MOB1BQ7L9L4 216 aa12.26□□□□□ -0.45
TM9SF1-202ENST00000396854 COQ2Q96H96 371 aa12.26□□□□□ -0.45
TM9SF1-202ENST00000396854 TMEM56Q96MV1 263 aa12.26□□□□□ -0.45
TM9SF1-202ENST00000396854 PARP12Q9H0J9 701 aaKnown RBP12.26□□□□□ -0.45
TM9SF1-202ENST00000396854 C19orf12Q9NSK7 152 aa12.26□□□□□ -0.45
TM9SF1-202ENST00000396854 SLC25A10Q9UBX3 287 aaPredicted RBP12.26□□□□□ -0.45
TM9SF1-202ENST00000396854 TMEM56-RWDD3S4R434 201 aa12.26□□□□□ -0.45
TM9SF1-202ENST00000396854 HECTD1Q9ULT8 2610 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 KIR2DS1A0A191URI9 304 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 GNRHRP30968 328 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 KIR2DS4P43632 304 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 PPT1P50897 306 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 EWSR1Q01844 656 aaKnown RBP eCLIP12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 NHLH2Q02577 135 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 ZNF616Q08AN1 781 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 KIR2DS1Q14954 304 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 LRRC10Q5BKY1 277 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 NEIL1Q96FI4 390 aaPredicted RBP12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 ABHD14BQ96IU4 210 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 PATZ1Q9HBE1 687 aaKnown RBP12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 POLQO75417 2590 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 TMEM30CPA0ZSE6 113 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 NDUFB3O43676 98 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 WNT2P09544 360 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 AESQ08117 197 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 ZNF841Q6ZN19 808 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 OR8B3Q8NGG8 313 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 OR8B2Q96RD0 313 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 SPIN2AQ99865 258 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 SPIN2BQ9BPZ2 258 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 SH3BGRL3Q9H299 93 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 NCOR1P1Q9H4R4 102 aa12.25□□□□□ -0.45
TM9SF1-202ENST00000396854 DUXBA0A1W2PPF3 345 aa12.24□□□□□ -0.45
TM9SF1-202ENST00000396854 DVL1O14640 695 aa12.24□□□□□ -0.45
TM9SF1-202ENST00000396854 CLEC12BQ2HXU8 276 aa12.24□□□□□ -0.45
TM9SF1-202ENST00000396854 KRBOX4Q5JUW0 171 aa12.24□□□□□ -0.45
TM9SF1-202ENST00000396854 TBC1D26Q86UD7 250 aa12.24□□□□□ -0.45
TM9SF1-202ENST00000396854 OR2C3Q8N628 320 aa12.24□□□□□ -0.45
TM9SF1-202ENST00000396854 IGHV4-30-2A0A087WSY4 118 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 A0A1B0GW64 132 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 GPR37O15354 613 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 HLA-DRB3P79483 266 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 PRSS57Q6UWY2 283 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 FGFRL1Q8N441 504 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 MBNL3Q9NUK0 354 aaKnown RBP12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 PDZD2O15018 2839 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 ZNF98A6NK75 572 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 PITX3O75364 302 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 TUSC2O75896 110 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 IGHV2-5P01817 119 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 PRH1P02810 166 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 CTXN2P0C2S0 81 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 RPL35P42766 123 aaKnown RBP12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 NKX2-1P43699 371 aaPredicted RBP12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 GLIPR1P48060 266 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 FHITP49789 147 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 EDDM3AQ14507 147 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 ZNF695Q8IW36 515 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 SELENOHQ8IZQ5 122 aaKnown RBP12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 HSD17B11Q8NBQ5 300 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 LFNGQ8NES3 379 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 CLCC1Q96S66 551 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 CABLES2Q9BTV7 478 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 TUBA4BQ9H853 241 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 COA4Q9NYJ1 87 aa12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 UBE2J1Q9Y385 318 aaPredicted RBP12.23□□□□□ -0.45
TM9SF1-202ENST00000396854 ODAMA1E959 279 aa12.22□□□□□ -0.45
TM9SF1-202ENST00000396854 IFNA4P05014 189 aa12.22□□□□□ -0.45
TM9SF1-202ENST00000396854 SLC25A16P16260 332 aa12.22□□□□□ -0.45
TM9SF1-202ENST00000396854 NDUFB7P17568 137 aa12.22□□□□□ -0.45
TM9SF1-202ENST00000396854 AKR1D1P51857 326 aa12.22□□□□□ -0.45
TM9SF1-202ENST00000396854 ZNF266Q14584 549 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms